prot_L-elsbetiae_contig8906.17929.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8906.17929.1
Unique Nameprot_L-elsbetiae_contig8906.17929.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length390
Homology
BLAST of mRNA_L-elsbetiae_contig8906.17929.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 2.270e-115
Identity = 208/394 (52.79%), Postives = 269/394 (68.27%), Query Frame = 0
Query:    1 MPGSIVIPKLFAAAAAPPASVAAK--GSWKAIIPSGERPS--AKSVSDAKTHEYMRWLHDSNSLVAVVRLVSAAASSAFSRGPPAAPGDRPYATGRVIAHGTNLVLSGLRQILLGFACIVLAACIGIEDLEDKALILTSVADFIVGWLFLDAILSTRVSSFSIVNHKLLFVFVFVRLGLTALQVVLSFHQFRDGDSSLELYAAVFVISIVKLAMSHKSELMPCMDAVNHSYMATVHIVKHYGTPAKPNDHNHVSIVAET-NISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIRGWVASTAVTVLADILLRKPLSVLAIATFYTIRDYVRVPETVYVGTGRSQRPIGQL 389
            MP SI+ PKLFAAAAAPP S+      +W+ I+P   + S  A+ ++ AK +   RWL + N++VAV RL+S+A   + SR   +   DR Y++G  +  GTNLV SGL Q+LL   C+ L+A IGIED  +KALI T+ A  ++G LFLDA+LSTR S+FSI+N K+LF  VF R+ +TALQVVL+FH  R+  SS  LY  +F +SI  +  SHK+ELMPCMDAVN  YM+ + + K Y  P K  DH+H  + + T ++  LR +AAVKIQ +VRM+QA  R +RRQEV  W  P V  MRKRLTFRAY  L ++T  +AWINLCYVA YD  AIR W+A+T + VL DI+LRKPLSVL +AT  TIRD  RVP TVY+G G  QRPIG+ 
Sbjct:  511 MPASILFPKLFAAAAAPPPSITVTMLHAWEKIVPPTSQGSTTAQDMTYAKANSQSRWLREPNTVVAVFRLISSAVLKSTSRVSSSFREDRRYSSGGAVDRGTNLVWSGLWQMLLDLVCVALSATIGIEDQLEKALISTTAAGLLLGLLFLDAVLSTRASTFSILNFKVLFSIVFARIVVTALQVVLAFHGMRNAASSTALYGTLFALSIAMIFGSHKNELMPCMDAVNQRYMSQISMAKMYRPPPKV-DHSHQHVSSWTIDLCILRNTAAVKIQTLVRMYQARQRAVRRQEVVAWQSPHVRSMRKRLTFRAYTCLIVFTASVAWINLCYVALYDGPAIRNWIAATGIAVLVDIVLRKPLSVLVVATVNTIRDSARVPGTVYIGKGPFQRPIGKF 903          
BLAST of mRNA_L-elsbetiae_contig8906.17929.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 2.670e-91
Identity = 176/339 (51.92%), Postives = 234/339 (69.03%), Query Frame = 0
Query:    1 MPGSIVIPKLFAAAAAPPASVAAK--GSWKAIIPSGERP--SAKSVSDAKTHEYMRWLHDSNSLVAVVRLVSAAASSAFSRGPPAAPGDRPYATGRVIAHGTNLVLSGLRQILLGFACIVLAACIGIEDLEDKALILTSVADFIVGWLFLDAILSTRVSSFSIVNHKLLFVFVFVRLGLTALQVVLSFHQFRDGDSSLELYAAVFVISIVKLAMSHKSELMPCMDAVNHSYMATVHIVKHYGTPAKPNDHNHVSIVAET-NISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIR 334
            MP SI+IPKLFA AAAPP SV      +W+ I+PS  +   +A+ ++++K +   RWL + N+++AV RL+S+A   +  R PP+  G R Y+TG  +  GTNLV SGL Q+LL   C+ L+A IGIED  +KALI T+VA  ++G LFLDA+LSTR SSFSI+N  +LF  VF R+ +TALQVVL+FH  R+  SS  LY  +F +S+VK+  SHK+ELMPCMDAVN  YM+ + + K Y  P K  DH+H  + + T ++  LR +AAVKIQ +VRM+QA+ R +RRQEV VW  P V  MR+RLTFRAY  L ++T  +AWINLCYV  YD  AIR
Sbjct: 1445 MPASILIPKLFATAAAPPPSVTVTMLHAWEKIVPSTNQEVLTAQDMTNSKANSQTRWLREPNTVMAVFRLISSAVLRSTLRVPPSFRGGRRYSTGGAVDRGTNLVWSGLWQMLLDLVCVALSATIGIEDQLEKALISTTVAGLLLGLLFLDAVLSTRASSFSILNFNVLFSIVFARIVVTALQVVLAFHGVRNAASSTALYGTLFALSVVKIFGSHKNELMPCMDAVNQRYMSQISMAKMYRPPPKV-DHSHQHVSSSTIDLCILRNTAAVKIQTLVRMYQAHQRAVRRQEVVVWQCPRVKSMRRRLTFRAYTCLIVFTASVAWINLCYVVMYDGPAIR 1782          
BLAST of mRNA_L-elsbetiae_contig8906.17929.1 vs. uniprot
Match: D7FLP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP9_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 3.670e-85
Identity = 150/275 (54.55%), Postives = 193/275 (70.18%), Query Frame = 0
Query:   61 VAVVRLVSAAASSAFSRGPPAAPGDRPYATGRVIAHGTNLVLSGLRQILLGFACIVLAACIGIEDLEDKALILTSVADFIVGWLFLDAILSTRVSSFSIVNHKLLFVFVFVRLGLTALQVVLSFHQFRDGDSSLELYAAVFVISIVKLAMSHKSELMPCMDAVNHSYMATVHIVKHYGTPAKPNDHNHVSIVAET-NISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIR 334
            +AV RL+S+A   +  R PP+  G R Y+TG  +  GTNLV SGL Q+LL   C+ L+A IGIED  +KALI T+VA  ++G LFLDA+LSTR SSFSI+N  +LF  VF R+ +TALQVVL+FH  R+  SS  LY  +F +S+VK+  SHK+ELMPCMDAVN  YM+ + + K Y  P K  DH+H  + + T ++  LR +AAVKIQ +VRM+QA+ R +RRQEV VW  P V  MR+RLTFRAYA L ++T  +AWINLCYV  YD  AIR
Sbjct:    1 MAVFRLISSAVLRSTLRVPPSFRGGRRYSTGGAVDRGTNLVWSGLWQMLLDLVCVALSATIGIEDQLEKALISTTVAGLLLGLLFLDAVLSTRASSFSILNFNVLFSIVFARIVVTALQVVLAFHGVRNAASSTALYGTLFALSVVKIFGSHKNELMPCMDAVNQRYMSQISMAKMYRPPPKV-DHSHQHVSSSTIDLCILRNTAAVKIQTLVRMYQAHQRAVRRQEVVVWQCPRVKSMRRRLTFRAYACLIVFTASVAWINLCYVVMYDGPAIR 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8906.17929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLT2_9PHAE2.270e-11552.79GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4X3_ECTSI2.670e-9151.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLP9_ECTSI3.670e-8554.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 328..332
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 351..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 306..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..305
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 333..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..182
NoneNo IPR availableTMHMMTMhelixcoord: 193..210
NoneNo IPR availableTMHMMTMhelixcoord: 164..183
NoneNo IPR availableTMHMMTMhelixcoord: 306..328
NoneNo IPR availableTMHMMTMhelixcoord: 132..151
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 343..365
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 261..288
score: 7.291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8906contigL-elsbetiae_contig8906:1774..6100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8906.17929.1mRNA_L-elsbetiae_contig8906.17929.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8906 738..6116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8906.17929.1 ID=prot_L-elsbetiae_contig8906.17929.1|Name=mRNA_L-elsbetiae_contig8906.17929.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MPGSIVIPKLFAAAAAPPASVAAKGSWKAIIPSGERPSAKSVSDAKTHEY
MRWLHDSNSLVAVVRLVSAAASSAFSRGPPAAPGDRPYATGRVIAHGTNL
VLSGLRQILLGFACIVLAACIGIEDLEDKALILTSVADFIVGWLFLDAIL
STRVSSFSIVNHKLLFVFVFVRLGLTALQVVLSFHQFRDGDSSLELYAAV
FVISIVKLAMSHKSELMPCMDAVNHSYMATVHIVKHYGTPAKPNDHNHVS
IVAETNISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRK
RLTFRAYASLAIYTLVIAWINLCYVASYDTAAIRGWVASTAVTVLADILL
RKPLSVLAIATFYTIRDYVRVPETVYVGTGRSQRPIGQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS