prot_L-elsbetiae_contig8905.17928.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8905.17928.1
Unique Name	prot_L-elsbetiae_contig8905.17928.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	85

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig8905.17928.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.070e-24
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 0

Query:    2 HPVHCLRRDDVAFYEGERVLRPTQWYRATRVKIIGFRGHKGDQVEQGPTLFRTRDVAQGYFFQVGAGGGAVAILVELLSSHFA 84
            H VHCLRR DV F++GE VL    W++AT V++  FRGHKGDQ E+G  + R R+VA+G   Q+GAGGGAVA+LVEL++ H A
Sbjct:  107 HQVHCLRRSDVEFFDGEDVLAQLHWHKATGVRVR-FRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLA 188

[Close]

BLAST of mRNA_L-elsbetiae_contig8905.17928.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.270e-23
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 0

Query:    2 HPVHCLRRDDVAFYEGERVLRPTQWYRATRVKIIGFRGHKGDQVEQGPTLFRTRDVAQGYFFQVGAGGGAVAILVELLSSHFA 84
            H VHCLRR DV F++GE VL    W++AT V++  FRGHKGDQ E+G  + R R+VA+G   Q+GAGGGAVA+LVEL++ H A
Sbjct:  724 HQVHCLRRSDVEFFDGEDVLAQLHWHKATGVRVR-FRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLA 805

[Close]

BLAST of mRNA_L-elsbetiae_contig8905.17928.1 vs. uniprot
Match: A0A6H5K3G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G1_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.670e-7
Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 0

Query:    1 MHPVHCLRRDDVAFYEGERVLRPTQWYRATRVKIIGFRGHKGDQVEQGPTLFRTRDVAQGYFFQVGAGGGAVAILVELLS 80
            M   H LRR DVAF+ G R L P +   A RV++  FR  KGDQ  +G    R R    G    V  GGGAV +++ELLS
Sbjct:  210 MDSCHGLRRGDVAFFLGSRQLPPERRGEADRVEVR-FRSSKGDQFRKGAVCTRARP---GPPQSVECGGGAVDVMIELLS 285

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8905.17928.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8905.17928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K718_9PHAE	2.070e-24	57.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KTP7_9PHAE	2.270e-23	57.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3G1_9PHAE	3.670e-7	45.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	TMHMM	TMhelix		coord: 61..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8905	contig	L-elsbetiae_contig8905:2290..2544 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8905.17928.1	mRNA_L-elsbetiae_contig8905.17928.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8905 2109..3447 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8905.17928.1 ID=prot_L-elsbetiae_contig8905.17928.1|Name=mRNA_L-elsbetiae_contig8905.17928.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
MHPVHCLRRDDVAFYEGERVLRPTQWYRATRVKIIGFRGHKGDQVEQGPT
LFRTRDVAQGYFFQVGAGGGAVAILVELLSSHFA*