prot_L-elsbetiae_contig890.17925.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig890.17925.1
Unique Nameprot_L-elsbetiae_contig890.17925.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length184
Homology
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: D8LER1_ECTSI (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER1_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 2.110e-94
Identity = 160/185 (86.49%), Postives = 170/185 (91.89%), Query Frame = 0
Query:    1 GWLNSLDVQQRLGSARPHSTGSNR-VGCSSNFRRRKRHVVMGAAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            G L+SLDV+Q+  SARPHS G+   V  S N RRR+RHV+MGA AA TRLESLTV+PISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQ+MLGALKTLKV V+SDLEAKTVEVVGNAGPFEVS PTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQ+
Sbjct:   36 GGLSSLDVRQQAASARPHSNGAEAGVRGSRNCRRRQRHVMMGATAA-TRLESLTVSPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQYMLGALKTLKVSVDSDLEAKTVEVVGNAGPFEVSDPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQL 219          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A836CIT3_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 5.110e-54
Identity = 99/142 (69.72%), Postives = 116/142 (81.69%), Query Frame = 0
Query:   45 AATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEV--SGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            A ++LE+LTV PI  ISGEV LPGSKSLSNRVLLL+AL+ GTT + NLLDS+DI++MLGAL+ L V ++ D+EAK V V GNAG F    + P ELFLGNAGTAMRPLTAV+CAG+G FVMDGTPRMRERPI DLV GL Q+
Sbjct:    3 AVSKLETLTVEPIDKISGEVVLPGSKSLSNRVLLLAALSSGTTTINNLLDSDDIRYMLGALEKLGVGLDRDVEAKRVVVTGNAGAFNAPDATPIELFLGNAGTAMRPLTAVMCAGEGNFVMDGTPRMRERPIKDLVGGLVQL 144          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A6V1NGJ7_HETAK (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NGJ7_HETAK)

HSP 1 Score: 185 bits (470), Expect = 1.250e-53
Identity = 95/142 (66.90%), Postives = 115/142 (80.99%), Query Frame = 0
Query:   45 AATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESD--LEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            A   LE L + PI+ I+GEV+LPGSKSLSNRVLLLSALAEG+T +ENLL S+DI++M+ AL+TLK+P++    L  K V+V GN GPF    PTELFLGNAGTAMRPLTAV+CAG+G+FV+DG PRMRERPI DL DGL Q+
Sbjct:    2 ATEELEQLRLEPIAKITGEVDLPGSKSLSNRVLLLSALAEGSTTIENLLSSDDIKYMIEALQTLKIPLDLSEYLSEKRVKVEGNGGPFNADEPTELFLGNAGTAMRPLTAVMCAGRGDFVLDGVPRMRERPIKDLSDGLLQL 143          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S2XVK4_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVK4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.060e-51
Identity = 98/141 (69.50%), Postives = 109/141 (77.30%), Query Frame = 0
Query:   46 ATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGP--TELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            AT ++S+T+ PIS ISGEVELPGSKSLSNRVLLLSALA G T VENLL SEDI +ML ALKTL + ++   E K V V GN GPF       TELFLGNAGTAMRPL AVVCAG+G FV+DG  RMRERPI DL DGLKQ+
Sbjct:   54 ATSVDSITLQPISKISGEVELPGSKSLSNRVLLLSALATGETTVENLLSSEDIHYMLDALKTLNIGLDQYPEEKRVIVTGNGGPFNADPEDGTELFLGNAGTAMRPLAAVVCAGQGNFVLDGVARMRERPIKDLTDGLKQL 194          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S2VGI4_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VGI4_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.860e-48
Identity = 91/137 (66.42%), Postives = 107/137 (78.10%), Query Frame = 0
Query:   52 LTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKT-VEVVGNAGPFEVSGPTE---LFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            LTV PI  + G V LPGSKSLSNR LLL+AL++G T+VENLL+S+DI++ML AL TLKVPVE D + KT V V G AGP +   P E   LFLGNAGTAMRPL A +C GKG+FV+DG PRMRERPI DL+DGLKQ+
Sbjct:   87 LTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSDGNTRVENLLESDDIRYMLEALDTLKVPVERDADDKTAVTVTGQAGPIDSPTPEESLELFLGNAGTAMRPLAAALCMGKGKFVLDGVPRMRERPIADLIDGLKQL 223          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S2XP56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP56_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.880e-48
Identity = 91/149 (61.07%), Postives = 106/149 (71.14%), Query Frame = 0
Query:   40 MGAAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKT-VEVVGNAGPFEVSGPT---ELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            M A A      SLTV PI  + G V LPGSKSLSNR LLL+AL++G TKVENLL+S+DI++ML AL  L+VPV  D    T V V G AGP +   P    ELFLGNAGTAMRPL A +C GKG+FV+DG PRMRERPI DL+DGL Q+
Sbjct:   15 MSAVAVDKETNSLTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSKGETKVENLLESDDIRYMLDALDQLQVPVARDPNDPTCVTVTGQAGPIDSPSPEDVLELFLGNAGTAMRPLAAALCMGKGKFVLDGVPRMRERPIADLIDGLVQL 163          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A5J4Z8J0_PORPP (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8J0_PORPP)

HSP 1 Score: 172 bits (437), Expect = 8.940e-48
Identity = 95/143 (66.43%), Postives = 109/143 (76.22%), Query Frame = 0
Query:   42 AAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            A +AA  LESL + PI  ISGE++LPGSKSLSNR+LLL+ALA GTT VENLLDS+D+Q+ML ALK L V    D  AK   V G AG +  +G  ELFLGNAGTAMRPL A VCAG G FV+DGTPRMRERPI DLVD L+Q+
Sbjct:  129 AMSAAAGLESLRLEPIGKISGEIDLPGSKSLSNRMLLLAALARGTTVVENLLDSDDVQYMLAALKELGVECSVDWAAKKAVVKGCAGAWPAAG-AELFLGNAGTAMRPLAAAVCAGHGTFVLDGTPRMRERPIKDLVDALQQL 270          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: K0T8D0_THAOC (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8D0_THAOC)

HSP 1 Score: 171 bits (434), Expect = 1.430e-47
Identity = 90/137 (65.69%), Postives = 107/137 (78.10%), Query Frame = 0
Query:   52 LTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKT-VEVVGNAGPFEVSGP---TELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            LTV PI  + G V LPGSKSLSNR LLL+AL+EGTT+VENLL+S+DI++ML AL TLKVPVE D + KT V V G +GP +   P    ELFLGNAGTAMRPL A +C G G+FV+DG PRMRERPI DL+DGL+Q+
Sbjct:   85 LTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVENLLESDDIRYMLEALDTLKVPVERDEDDKTSVAVTGQSGPIDSPTPEETVELFLGNAGTAMRPLAAALCMGSGKFVLDGVPRMRERPIADLIDGLRQL 221          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A383V5Z1_TETOB (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V5Z1_TETOB)

HSP 1 Score: 169 bits (429), Expect = 1.760e-47
Identity = 96/148 (64.86%), Postives = 113/148 (76.35%), Query Frame = 0
Query:   38 VVMGAAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCA-GKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            +V+ AAAAA +LE LTV PI  ISG V+LPGSKSLSNR+LLL+ALAEGTT V NLLDS+DI++M GALK L + +E + E   + V G  G F   G  ELFLGNAGTAMRPLTA V A G+G+FV+DG  RMRERPI DLVDGL Q+
Sbjct:    1 MVVAAAAAAEKLEQLTVQPIKTISGTVKLPGSKSLSNRILLLAALAEGTTVVRNLLDSDDIRYMAGALKALGIKLEENWEEGVMVVHGCGGRFPADGG-ELFLGNAGTAMRPLTAAVAAAGRGKFVLDGVARMRERPIQDLVDGLVQL 147          
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S1UKH8_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKH8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.000e-47
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 0
Query:   49 LESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVS----GPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 184
            LESL V PI+ I+G V LPGSKSLSNRVLLL+AL+EGTT VENLLDS+DI++MLGALK L V  E D EA+ V V G  G F+VS      TEL+LGNAGTAMRPL AVV A +G +V+DGTPRMRERPI DLV  LK +
Sbjct:   38 LESLDVEPIAKITGTVTLPGSKSLSNRVLLLAALSEGTTVVENLLDSDDIRYMLGALKDLGVEYEEDTEARRVTVKGLGGGFKVSDDAAAATELYLGNAGTAMRPLCAVVAASEGRYVLDGTPRMRERPIQDLVTALKDL 177          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LER1_ECTSI2.110e-9486.493-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
A0A836CIT3_9STRA5.110e-5469.723-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
A0A6V1NGJ7_HETAK1.250e-5366.903-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
A0A7S2XVK4_9STRA2.060e-5169.503-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
A0A7S2VGI4_9STRA2.860e-4866.423-phosphoshikimate 1-carboxyvinyltransferase (Frag... [more]
A0A7S2XP56_9STRA3.880e-4861.07Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A5J4Z8J0_PORPP8.940e-4866.433-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
K0T8D0_THAOC1.430e-4765.693-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
A0A383V5Z1_TETOB1.760e-4764.863-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]
A0A7S1UKH8_9STRA2.000e-4767.143-phosphoshikimate 1-carboxyvinyltransferase n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001986Enolpyruvate transferase domainPFAMPF00275EPSP_synthasecoord: 56..184
e-value: 1.4E-39
score: 136.0
IPR036968Enolpyruvate transferase domain superfamilyGENE3D3.65.10.10coord: 68..184
e-value: 6.0E-36
score: 125.6
NoneNo IPR availablePANTHERPTHR21090:SF24PENTAFUNCTIONAL AROM POLYPEPTIDEcoord: 51..183
NoneNo IPR availablePANTHERPTHR21090AROM/DEHYDROQUINATE SYNTHASEcoord: 51..183
IPR0231933-phosphoshikimate 1-carboxyvinyltransferase, conserved sitePROSITEPS00104EPSP_SYNTHASE_1coord: 138..152
IPR013792RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaSUPERFAMILY55205EPT/RTPC-likecoord: 50..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig890contigL-elsbetiae_contig890:418..3709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig890.17925.1mRNA_L-elsbetiae_contig890.17925.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig890 418..3709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig890.17925.1 ID=prot_L-elsbetiae_contig890.17925.1|Name=mRNA_L-elsbetiae_contig890.17925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp
GWLNSLDVQQRLGSARPHSTGSNRVGCSSNFRRRKRHVVMGAAAAATRLE
SLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQF
MLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPL
TAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001986Enolpyruvate_Tfrase_dom
IPR036968Enolpyruvate_Tfrase_sf
IPR023193EPSP_synthase_CS
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b