mRNA_L-elsbetiae_contig890.17925.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: D8LER1_ECTSI (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER1_ECTSI) HSP 1 Score: 292 bits (748), Expect = 2.110e-94 Identity = 160/185 (86.49%), Postives = 170/185 (91.89%), Query Frame = 1 Query: 1 GWLNSLDVQQRLGSARPHSTGSNR-VGCSSNFRRRKRHVVMGAAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 G L+SLDV+Q+ SARPHS G+ V S N RRR+RHV+MGA AA TRLESLTV+PISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQ+MLGALKTLKV V+SDLEAKTVEVVGNAGPFEVS PTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQ+ Sbjct: 36 GGLSSLDVRQQAASARPHSNGAEAGVRGSRNCRRRQRHVMMGATAA-TRLESLTVSPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQYMLGALKTLKVSVDSDLEAKTVEVVGNAGPFEVSDPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQL 219
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A836CIT3_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT3_9STRA) HSP 1 Score: 186 bits (473), Expect = 5.110e-54 Identity = 99/142 (69.72%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 133 AATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEV--SGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 A ++LE+LTV PI ISGEV LPGSKSLSNRVLLL+AL+ GTT + NLLDS+DI++MLGAL+ L V ++ D+EAK V V GNAG F + P ELFLGNAGTAMRPLTAV+CAG+G FVMDGTPRMRERPI DLV GL Q+ Sbjct: 3 AVSKLETLTVEPIDKISGEVVLPGSKSLSNRVLLLAALSSGTTTINNLLDSDDIRYMLGALEKLGVGLDRDVEAKRVVVTGNAGAFNAPDATPIELFLGNAGTAMRPLTAVMCAGEGNFVMDGTPRMRERPIKDLVGGLVQL 144
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A6V1NGJ7_HETAK (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NGJ7_HETAK) HSP 1 Score: 185 bits (470), Expect = 1.250e-53 Identity = 95/142 (66.90%), Postives = 115/142 (80.99%), Query Frame = 1 Query: 133 AATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESD--LEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 A LE L + PI+ I+GEV+LPGSKSLSNRVLLLSALAEG+T +ENLL S+DI++M+ AL+TLK+P++ L K V+V GN GPF PTELFLGNAGTAMRPLTAV+CAG+G+FV+DG PRMRERPI DL DGL Q+ Sbjct: 2 ATEELEQLRLEPIAKITGEVDLPGSKSLSNRVLLLSALAEGSTTIENLLSSDDIKYMIEALQTLKIPLDLSEYLSEKRVKVEGNGGPFNADEPTELFLGNAGTAMRPLTAVMCAGRGDFVLDGVPRMRERPIKDLSDGLLQL 143
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S2XVK4_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVK4_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.060e-51 Identity = 98/141 (69.50%), Postives = 109/141 (77.30%), Query Frame = 1 Query: 136 ATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGP--TELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 AT ++S+T+ PIS ISGEVELPGSKSLSNRVLLLSALA G T VENLL SEDI +ML ALKTL + ++ E K V V GN GPF TELFLGNAGTAMRPL AVVCAG+G FV+DG RMRERPI DL DGLKQ+ Sbjct: 54 ATSVDSITLQPISKISGEVELPGSKSLSNRVLLLSALATGETTVENLLSSEDIHYMLDALKTLNIGLDQYPEEKRVIVTGNGGPFNADPEDGTELFLGNAGTAMRPLAAVVCAGQGNFVLDGVARMRERPIKDLTDGLKQL 194
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S2VGI4_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VGI4_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.860e-48 Identity = 91/137 (66.42%), Postives = 107/137 (78.10%), Query Frame = 1 Query: 154 LTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKT-VEVVGNAGPFEVSGPTE---LFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 LTV PI + G V LPGSKSLSNR LLL+AL++G T+VENLL+S+DI++ML AL TLKVPVE D + KT V V G AGP + P E LFLGNAGTAMRPL A +C GKG+FV+DG PRMRERPI DL+DGLKQ+ Sbjct: 87 LTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSDGNTRVENLLESDDIRYMLEALDTLKVPVERDADDKTAVTVTGQAGPIDSPTPEESLELFLGNAGTAMRPLAAALCMGKGKFVLDGVPRMRERPIADLIDGLKQL 223
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S2XP56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP56_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.880e-48 Identity = 91/149 (61.07%), Postives = 106/149 (71.14%), Query Frame = 1 Query: 118 MGAAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKT-VEVVGNAGPFEVSGPT---ELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 M A A SLTV PI + G V LPGSKSLSNR LLL+AL++G TKVENLL+S+DI++ML AL L+VPV D T V V G AGP + P ELFLGNAGTAMRPL A +C GKG+FV+DG PRMRERPI DL+DGL Q+ Sbjct: 15 MSAVAVDKETNSLTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSKGETKVENLLESDDIRYMLDALDQLQVPVARDPNDPTCVTVTGQAGPIDSPSPEDVLELFLGNAGTAMRPLAAALCMGKGKFVLDGVPRMRERPIADLIDGLVQL 163
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A5J4Z8J0_PORPP (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8J0_PORPP) HSP 1 Score: 172 bits (437), Expect = 8.940e-48 Identity = 95/143 (66.43%), Postives = 109/143 (76.22%), Query Frame = 1 Query: 124 AAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 A +AA LESL + PI ISGE++LPGSKSLSNR+LLL+ALA GTT VENLLDS+D+Q+ML ALK L V D AK V G AG + +G ELFLGNAGTAMRPL A VCAG G FV+DGTPRMRERPI DLVD L+Q+ Sbjct: 129 AMSAAAGLESLRLEPIGKISGEIDLPGSKSLSNRMLLLAALARGTTVVENLLDSDDVQYMLAALKELGVECSVDWAAKKAVVKGCAGAWPAAG-AELFLGNAGTAMRPLAAAVCAGHGTFVLDGTPRMRERPIKDLVDALQQL 270
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: K0T8D0_THAOC (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8D0_THAOC) HSP 1 Score: 171 bits (434), Expect = 1.430e-47 Identity = 90/137 (65.69%), Postives = 107/137 (78.10%), Query Frame = 1 Query: 154 LTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKT-VEVVGNAGPFEVSGP---TELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 LTV PI + G V LPGSKSLSNR LLL+AL+EGTT+VENLL+S+DI++ML AL TLKVPVE D + KT V V G +GP + P ELFLGNAGTAMRPL A +C G G+FV+DG PRMRERPI DL+DGL+Q+ Sbjct: 85 LTVTPIKSLDGTVTLPGSKSLSNRCLLLAALSEGTTRVENLLESDDIRYMLEALDTLKVPVERDEDDKTSVAVTGQSGPIDSPTPEETVELFLGNAGTAMRPLAAALCMGSGKFVLDGVPRMRERPIADLIDGLRQL 221
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A383V5Z1_TETOB (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V5Z1_TETOB) HSP 1 Score: 169 bits (429), Expect = 1.760e-47 Identity = 96/148 (64.86%), Postives = 113/148 (76.35%), Query Frame = 1 Query: 112 VVMGAAAAATRLESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVSGPTELFLGNAGTAMRPLTAVVCA-GKGEFVMDGTPRMRERPIVDLVDGLKQV 552 +V+ AAAAA +LE LTV PI ISG V+LPGSKSLSNR+LLL+ALAEGTT V NLLDS+DI++M GALK L + +E + E + V G G F G ELFLGNAGTAMRPLTA V A G+G+FV+DG RMRERPI DLVDGL Q+ Sbjct: 1 MVVAAAAAAEKLEQLTVQPIKTISGTVKLPGSKSLSNRILLLAALAEGTTVVRNLLDSDDIRYMAGALKALGIKLEENWEEGVMVVHGCGGRFPADGG-ELFLGNAGTAMRPLTAAVAAAGRGKFVLDGVARMRERPIQDLVDGLVQL 147
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Match: A0A7S1UKH8_9STRA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKH8_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.000e-47 Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 1 Query: 145 LESLTVAPISLISGEVELPGSKSLSNRVLLLSALAEGTTKVENLLDSEDIQFMLGALKTLKVPVESDLEAKTVEVVGNAGPFEVS----GPTELFLGNAGTAMRPLTAVVCAGKGEFVMDGTPRMRERPIVDLVDGLKQV 552 LESL V PI+ I+G V LPGSKSLSNRVLLL+AL+EGTT VENLLDS+DI++MLGALK L V E D EA+ V V G G F+VS TEL+LGNAGTAMRPL AVV A +G +V+DGTPRMRERPI DLV LK + Sbjct: 38 LESLDVEPIAKITGTVTLPGSKSLSNRVLLLAALSEGTTVVENLLDSDDIRYMLGALKDLGVEYEEDTEARRVTVKGLGGGFKVSDDAAAATELYLGNAGTAMRPLCAVVAASEGRYVLDGTPRMRERPIQDLVTALKDL 177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig890.17925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig890.17925.1 >prot_L-elsbetiae_contig890.17925.1 ID=prot_L-elsbetiae_contig890.17925.1|Name=mRNA_L-elsbetiae_contig890.17925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp GWLNSLDVQQRLGSARPHSTGSNRVGCSSNFRRRKRHVVMGAAAAATRLEback to top mRNA from alignment at L-elsbetiae_contig890:418..3709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig890.17925.1 ID=mRNA_L-elsbetiae_contig890.17925.1|Name=mRNA_L-elsbetiae_contig890.17925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3292bp|location=Sequence derived from alignment at L-elsbetiae_contig890:418..3709- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig890:418..3709- >mRNA_L-elsbetiae_contig890.17925.1 ID=mRNA_L-elsbetiae_contig890.17925.1|Name=mRNA_L-elsbetiae_contig890.17925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig890:418..3709- (Laminarionema elsbetiae ELsaHSoW15)back to top |