prot_L-elsbetiae_contig8894.17915.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8894.17915.1
Unique Nameprot_L-elsbetiae_contig8894.17915.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length59
Homology
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BLAST of mRNA_L-elsbetiae_contig8894.17915.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.040e-15
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:    1 MATTCDVSFDEMAVALSYISLGGAAAAPASSARGLPSLAPVKKDSK 46
            MAT CD+SFDEMA+ALSYISLGG AAAPASSARGLPSLAPVK++ K
Sbjct:    1 MATACDISFDEMAMALSYISLGGTAAAPASSARGLPSLAPVKQEKK 46
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8894.17915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFV9_9PHAE2.040e-1584.78EF1_GNE domain-containing protein n=3 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8894contigL-elsbetiae_contig8894:5130..5306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8894.17915.1mRNA_L-elsbetiae_contig8894.17915.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8894 5130..5306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8894.17915.1 ID=prot_L-elsbetiae_contig8894.17915.1|Name=mRNA_L-elsbetiae_contig8894.17915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=59bp
MATTCDVSFDEMAVALSYISLGGAAAAPASSARGLPSLAPVKKDSKKGSK
KKAAAADDD
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