prot_L-elsbetiae_contig8627.17660.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig8627.17660.1
Unique Name	prot_L-elsbetiae_contig8627.17660.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	153

Homology

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BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 250 bits (638), Expect = 2.440e-83
Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0

Query:   16 TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    6 TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 249 bits (637), Expect = 2.830e-83
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   17 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136

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BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 248 bits (633), Expect = 1.150e-82
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0

Query:   17 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.300e-82
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   17 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)

HSP 1 Score: 249 bits (637), Expect = 3.300e-82
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   17 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: A0A836G1Z3_9HYME (Histone H3 (Fragment) n=2 Tax=Bilateria TaxID=33213 RepID=A0A836G1Z3_9HYME)

HSP 1 Score: 247 bits (630), Expect = 3.780e-82
Identity = 133/140 (95.00%), Postives = 137/140 (97.86%), Query Frame = 0

Query:   13 FQSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            F  TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 FDFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: F7BPK5_MONDO (Histone H3 n=6 Tax=Bilateria TaxID=33213 RepID=F7BPK5_MONDO)

HSP 1 Score: 246 bits (629), Expect = 5.200e-82
Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0

Query:   15 STMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            STMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL+RKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    2 STMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLVRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: A0A164UB18_9CRUS (Histone H3.2 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164UB18_9CRUS)

HSP 1 Score: 247 bits (630), Expect = 6.050e-82
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0

Query:    6 FQAFPHTFQSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            FQ   +    TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    8 FQFITNHLTKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 154

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: UPI00115647F2 (histone H3-like n=1 Tax=Aedes albopictus TaxID=7160 RepID=UPI00115647F2)

HSP 1 Score: 248 bits (634), Expect = 6.320e-82
Identity = 133/140 (95.00%), Postives = 139/140 (99.29%), Query Frame = 0

Query:   13 FQSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            F++TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:   58 FRATMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197

[Close]

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Match: D7G4I9_ECTSI (Similar to histone H3.2 n=2 Tax=PX clade TaxID=569578 RepID=D7G4I9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 6.670e-82
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0

Query:   17 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 152
            MARTKQTARKSTG +APRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGRQAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig8627.17660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6V1P6C6_HETAK	2.440e-83	98.54	Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829...	[more]
W4GZ05_9STRA	2.830e-83	99.26	Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ...	[more]
A0A1Z5K8H0_FISSO	1.150e-82	98.53	Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI...	[more]
A0A7S1BJN3_9STRA	1.300e-82	98.53	Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A...	[more]
K0S7I6_THAOC	3.300e-82	99.26	Histone domain-containing protein n=8 Tax=Bacillar...	[more]
A0A836G1Z3_9HYME	3.780e-82	95.00	Histone H3 (Fragment) n=2 Tax=Bilateria TaxID=3321...	[more]
F7BPK5_MONDO	5.200e-82	95.65	Histone H3 n=6 Tax=Bilateria TaxID=33213 RepID=F7B...	[more]
A0A164UB18_9CRUS	6.050e-82	91.16	Histone H3.2 n=1 Tax=Daphnia magna TaxID=35525 Rep...	[more]
UPI00115647F2	6.320e-82	95.00	histone H3-like n=1 Tax=Aedes albopictus TaxID=716...	[more]
D7G4I9_ECTSI	6.670e-82	98.53	Similar to histone H3.2 n=2 Tax=PX clade TaxID=569...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 130..151 score: 94.86 coord: 74..91 score: 97.46 coord: 114..130 score: 96.93 coord: 96..114 score: 76.89 coord: 19..33 score: 97.1 coord: 50..71 score: 93.58 coord: 33..47 score: 92.32
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 50..152 e-value: 3.3E-73 score: 259.2
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 10..151
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 31..37
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 83..91
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 18..152 e-value: 5.6E-79 score: 264.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 18..149
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 17..148 e-value: 1.9E-53 score: 180.3
None	No IPR available	PANTHER	PTHR11426:SF224		coord: 10..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig8627	contig	L-elsbetiae_contig8627:909..1367 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig8627.17660.1	mRNA_L-elsbetiae_contig8627.17660.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig8627 909..1367 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig8627.17660.1 ID=prot_L-elsbetiae_contig8627.17660.1|Name=mRNA_L-elsbetiae_contig8627.17660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
SDRSTFQAFPHTFQSTMARTKQTARKSTGGKAPRKQLATKAARKSAPATG
GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLR
FQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE
RS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000164	Histone_H3/CENP-A
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3