prot_L-elsbetiae_contig8547.17582.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8547.17582.1
Unique Nameprot_L-elsbetiae_contig8547.17582.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: D7FGT8_ECTSI (SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT8_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 3.220e-26
Identity = 56/77 (72.73%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L + VDRLSAQVAGRL+FEY+DP +NFDRSRVKGLVA+LVQVKDPAHSTALEVAAGG+LYQ          LLL +G
Sbjct:  491 LKEVVDRLSAQVAGRLSFEYRDPERNFDRSRVKGLVAKLVQVKDPAHSTALEVAAGGRLYQVVVDNQDTGKLLLEQG 567          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A6H5K638_9PHAE (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K638_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 4.370e-26
Identity = 56/77 (72.73%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L + VDRLSAQVAGRL+FEY+DP +NFDRSRVKGLVA+LVQVKDPAHSTALEVAAGG+LYQ          LLL +G
Sbjct:  504 LKEMVDRLSAQVAGRLSFEYRDPERNFDRSRVKGLVAKLVQVKDPAHSTALEVAAGGRLYQVVVDNQDTGKLLLEQG 580          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A7S2KSU1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KSU1_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.820e-19
Identity = 49/77 (63.64%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L + VD LSAQ+ GRL+F Y DP + FDRS+VKGLVARLV VK P HSTALEV AGGKLYQ    E A    LL  G
Sbjct:  347 LQEKVDTLSAQLEGRLSFNYSDPVRGFDRSKVKGLVARLVDVKLPKHSTALEVVAGGKLYQVVVDEAATGKALLNNG 423          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A7S2RK61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK61_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.030e-18
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L + VD LSAQ+ GRL F Y DP K FDRS+VKG+VA+LVQV++  H+TALEV AGGKLYQ    E      LL RG
Sbjct:  247 LQEVVDTLSAQLQGRLAFNYSDPVKGFDRSKVKGMVAKLVQVQNSKHTTALEVVAGGKLYQVVVDEAITGKALLNRG 323          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A7S2XJV8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJV8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.170e-18
Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L +TV+  SAQ+ GRL+F Y DP + FDRS+VKGLVA+L+QVK+ AH+TALEV AGGKLYQ    E      LL  G
Sbjct:  110 LRETVETFSAQLQGRLSFNYSDPVRGFDRSKVKGLVAKLIQVKESAHATALEVVAGGKLYQVVVDEAITGKALLNNG 186          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: K0T6D1_THAOC (Structural maintenance of chromosomes protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T6D1_THAOC)

HSP 1 Score: 88.6 bits (218), Expect = 1.190e-18
Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L + VD LSAQ+ GRL F Y DP + FDRS+VKGLVARL+ VK P HSTALE+ AGGKLYQ    E      LL +G
Sbjct:  492 LQEKVDTLSAQLEGRLAFNYSDPVRGFDRSKVKGLVARLINVKVPKHSTALEIVAGGKLYQVVVDEATTGKALLDKG 568          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A7S2H5Y5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5Y5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.080e-18
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    5 VDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            V+RL+A++ GRL+F+Y+ P K FDRS+VKGLVARLVQV +  HSTALEV AGGKLYQ     +    +LL +G
Sbjct:  163 VERLTAELEGRLSFDYRTPGKGFDRSKVKGLVARLVQVLNSGHSTALEVVAGGKLYQVVVDTEVTAKMLLQKG 235          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A7S2H5V1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5V1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.190e-18
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    5 VDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            V+RL+A++ GRL+F+Y+ P K FDRS+VKGLVARLVQV +  HSTALEV AGGKLYQ     +    +LL +G
Sbjct:  163 VERLTAELEGRLSFDYRTPGKGFDRSKVKGLVARLVQVLNSGHSTALEVVAGGKLYQVVVDTEVTAKMLLQKG 235          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: A0A8J9X5U0_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X5U0_PHATR)

HSP 1 Score: 87.4 bits (215), Expect = 2.870e-18
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L++ VD LSAQ+ GRL F+Y DP + FDRS+VKGLVA+L++VKD  ++TALEV AGGKLYQ    E      LL RG
Sbjct:   61 LSERVDTLSAQLEGRLRFKYSDPVRGFDRSKVKGLVAKLIEVKDHKNATALEVVAGGKLYQVVVDEAITGKALLDRG 137          
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Match: B7GAL2_PHATC (Structural maintenance of chromosomes protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAL2_PHATC)

HSP 1 Score: 87.4 bits (215), Expect = 3.020e-18
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTALEVAAGGKLYQARRKEDAYTSLLLARG 77
            L++ VD LSAQ+ GRL F+Y DP + FDRS+VKGLVA+L++VKD  ++TALEV AGGKLYQ    E      LL RG
Sbjct:  492 LSERVDTLSAQLEGRLRFKYSDPVRGFDRSKVKGLVAKLIEVKDHKNATALEVVAGGKLYQVVVDEAITGKALLDRG 568          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8547.17582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGT8_ECTSI3.220e-2672.73SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) n=1... [more]
A0A6H5K638_9PHAE4.370e-2672.73Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2KSU1_9STRA1.820e-1963.64Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2RK61_9STRA1.030e-1859.74Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2XJV8_9STRA1.170e-1858.44Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0T6D1_THAOC1.190e-1859.74Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2H5Y5_9STRA2.080e-1858.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2H5V1_9STRA2.190e-1858.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J9X5U0_PHATR2.870e-1858.44Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B7GAL2_PHATC3.020e-1858.44Structural maintenance of chromosomes protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 2..62
NoneNo IPR availablePANTHERPTHR43977:SF3coord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8547contigL-elsbetiae_contig8547:8112..8363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8547.17582.1mRNA_L-elsbetiae_contig8547.17582.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8547 8112..8363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8547.17582.1 ID=prot_L-elsbetiae_contig8547.17582.1|Name=mRNA_L-elsbetiae_contig8547.17582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
LAKTVDRLSAQVAGRLNFEYKDPHKNFDRSRVKGLVARLVQVKDPAHSTA
LEVAAGGKLYQARRKEDAYTSLLLARGVVCMYV*
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