prot_L-elsbetiae_contig8544.17578.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8544.17578.1
Unique Nameprot_L-elsbetiae_contig8544.17578.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length56
Homology
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: D8LN84_ECTSI (Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN84_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.290e-8
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0
Query:   25 GAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            G ++KKAIESMNARLQLVMKSGKASLGYKSTI
Sbjct:    4 GKKSKKAIESMNARLQLVMKSGKASLGYKSTI 35          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A8C6XDP1_NAJNA (60S ribosomal protein L30 n=2 Tax=Naja naja TaxID=35670 RepID=A0A8C6XDP1_NAJNA)

HSP 1 Score: 50.1 bits (118), Expect = 3.970e-6
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:   22 FVVGAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            FV  A+NKK++ES+N+RLQLVMKSGK  LGYK T+
Sbjct:   26 FVAAAKNKKSLESINSRLQLVMKSGKYVLGYKQTL 60          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A7S2AKD1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKD1_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 7.120e-6
Identity = 23/32 (71.88%), Postives = 30/32 (93.75%), Query Frame = 0
Query:   25 GAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            G ++K+A+ES+N+RLQLVMKSGKA LGYKST+
Sbjct:   26 GKKSKRAVESINSRLQLVMKSGKAELGYKSTL 57          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: W7T0G1_9STRA (Ribosomal protein l30 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T0G1_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 7.240e-6
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 0
Query:   27 QNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            ++KKAIES+N+RLQLVMKSGKASLGYK T+
Sbjct:   33 KSKKAIESINSRLQLVMKSGKASLGYKETL 62          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A812PA55_SYMMI (RPL30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PA55_SYMMI)

HSP 1 Score: 48.5 bits (114), Expect = 9.530e-6
Identity = 23/32 (71.88%), Postives = 29/32 (90.62%), Query Frame = 0
Query:   25 GAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            G + KK +ES+N+RLQLVM+SGKASLGYK+TI
Sbjct:    6 GKKTKKTVESINSRLQLVMRSGKASLGYKTTI 37          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A7S3HF33_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF33_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 1.970e-5
Identity = 22/33 (66.67%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   24 VGAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            VG + KKA+ES+N+++QLVMKSGK +LGYK+TI
Sbjct:    8 VGKKTKKAVESINSKVQLVMKSGKTALGYKTTI 40          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A2P2IBP2_9CRUS (60S ribosomal protein, putative (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IBP2_9CRUS)

HSP 1 Score: 47.4 bits (111), Expect = 3.450e-5
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   17 SAGTVFVVGAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            S G   +V  + KKA ES+N+RL LVMKSGKA+LGYKST+
Sbjct:   11 SCGDTKMVSKKQKKAQESINSRLTLVMKSGKATLGYKSTL 50          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A7S2USR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR9_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.550e-5
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 PRSTQAAERSAL-PKRSAGTVFVVGAQNKKAIESMNARLQLVMKSGKASLGYKSTI 56
            PR TQ A++S + P +   +        KK +E+MN++LQLVMKSGKASLGYKS+I
Sbjct:   27 PRHTQRAQKSIMAPSKKVSS--------KKTVENMNSQLQLVMKSGKASLGYKSSI 74          
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Match: A0A0G4J7S9_PLABS (Ribosomal_L7Ae domain-containing protein n=2 Tax=Plasmodiophoridae TaxID=37358 RepID=A0A0G4J7S9_PLABS)

HSP 1 Score: 46.2 bits (108), Expect = 7.690e-5
Identity = 23/28 (82.14%), Postives = 27/28 (96.43%), Query Frame = 0
Query:   29 KKAIESMNARLQLVMKSGKASLGYKSTI 56
            KKAIES+N+RLQLV+KSGK SLGYKST+
Sbjct:   11 KKAIESINSRLQLVVKSGKYSLGYKSTL 38          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8544.17578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LN84_ECTSI1.290e-890.63Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8C6XDP1_NAJNA3.970e-668.5760S ribosomal protein L30 n=2 Tax=Naja naja TaxID=... [more]
A0A7S2AKD1_9STRA7.120e-671.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7T0G1_9STRA7.240e-680.00Ribosomal protein l30 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A812PA55_SYMMI9.530e-671.88RPL30 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3HF33_9STRA1.970e-566.67Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2P2IBP2_9CRUS3.450e-562.5060S ribosomal protein, putative (Fragment) n=2 Tax... [more]
A0A7S2USR9_9STRA3.550e-551.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4J7S9_PLABS7.690e-582.14Ribosomal_L7Ae domain-containing protein n=2 Tax=P... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 22..56
e-value: 2.6E-6
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8544contigL-elsbetiae_contig8544:683..2368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8544.17578.1mRNA_L-elsbetiae_contig8544.17578.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8544 683..2368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8544.17578.1 ID=prot_L-elsbetiae_contig8544.17578.1|Name=mRNA_L-elsbetiae_contig8544.17578.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=56bp
APRSTQAAERSALPKRSAGTVFVVGAQNKKAIESMNARLQLVMKSGKASL
GYKSTI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029064L30e-like