prot_L-elsbetiae_contig8530.17566.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8530.17566.1
Unique Nameprot_L-elsbetiae_contig8530.17566.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length492
Homology
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BLAST of mRNA_L-elsbetiae_contig8530.17566.1 vs. uniprot
Match: A0A6H5J5M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5M4_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.930e-24
Identity = 99/229 (43.23%), Postives = 116/229 (50.66%), Query Frame = 0 
Query:   14 MFRSFFGTTAAGXXXXXXXXXXXXXKPSGP-QSARKGGTSQAS----STPSAKDSGGFFQLEPTNTSGEGSLFGDLEVKPPATDAKPPPMKKPPAAETESAGGVFSAFQFMATPASAXXXXXXXXXXXXAPHSSSGDPSAPSALLSPASVPMTGGDGDEAPGSGGAGVEMSAFSFLADDSRAESDAAAATGVAPSEEARGGEPESAPGDPPRKQQHAPLSSFSFLSAGG 237
            MFRS FGTT AG              PSG  Q+ARKG  ++ +    S+ + +D GGFFQLEPT+ S E SLF DLEVKPPA + KP PMK P  A++ESA GVFSAFQFMA PA+A                            S  + P+    G   P +GG G  MSAFSFL +    ES AA  +G    E        S PGD   K      SSFSFLS GG
Sbjct:    1 MFRSLFGTTVAGEYGDTGTTGGRRGNPSGQEQAARKGTPNKTAPGGGSSSAHQDGGGFFQLEPTHASAEESLFDDLEVKPPAVEPKPSPMKPP--ADSESAAGVFSAFQFMAEPAAA----------------------------SDKATPV----GGSPPSAGGGGQGMSAFSFLTE----ESPAAGESGEGQDETV------SIPGDAAGKTTP---SSFSFLSEGG 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8530.17566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J5M4_9PHAE1.930e-2443.23Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8530contigL-elsbetiae_contig8530:3291..7393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8530.17566.1mRNA_L-elsbetiae_contig8530.17566.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8530 3291..7393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8530.17566.1 ID=prot_L-elsbetiae_contig8530.17566.1|Name=mRNA_L-elsbetiae_contig8530.17566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=492bp
AEWCVVCARTKFDMFRSFFGTTAAGEDGGAGAAGGGGGKPSGPQSARKGG
TSQASSTPSAKDSGGFFQLEPTNTSGEGSLFGDLEVKPPATDAKPPPMKK
PPAAETESAGGVFSAFQFMATPASATAGAAGAGAAGAAPHSSSGDPSAPS
ALLSPASVPMTGGDGDEAPGSGGAGVEMSAFSFLADDSRAESDAAAATGV
APSEEARGGEPESAPGDPPRKQQHAPLSSFSFLSAGGDAGGGGFAAAAGA
GGGEDAVTSKEGPEENVFYATPAAGAALPTPSEAGGVNQQSSAGRDSHGG
GSGGQRTPSLASGASSPSSSAQGAAAAAASATGTSGATAAEEGVGKKAGG
GVTAAGAGGVPSWKPSSTVVRKKRTARRVGYARDETLSSSSSATRVASPL
SLPSSAAAAAAAAARVASPLSLPSSSASKSGMADTPLSSPLSAVGQKVLA
AGGGKGAPPPVGAAAGGGGVSHVPEAGSNYEAPSVSFPAKKE
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