prot_L-elsbetiae_contig85.17524.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig85.17524.1
Unique Nameprot_L-elsbetiae_contig85.17524.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length244
Homology
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 6.520e-121
Identity = 199/244 (81.56%), Postives = 211/244 (86.48%), Query Frame = 0
Query:    1 MEPFGFEPGPSRAMITFKQHEDGYHRCSVSINRAINGIQLNTLVEAVGATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLAR---SRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFKIRRR 241
            MEPFGFE GPSRA+ TF+ HE+ YHRCS+SINRAINGIQLN LV+AVGATSLP  LQEA QHVKGMEIE RSMKG+ERRQCQSRANQCRADLKALR++IDQAGQRAQAEELMRR GG  IGG  R FSE GG    L GLGPDLAQQSLAR   SRLSL DSRRVLEETEGIGRGVMGDLESQRESLLRSRA+VRDT  AA +ARRLL SISRRELRHRLCLY VIA+LSA+I  VLY KIRRR
Sbjct:    1 MEPFGFESGPSRAVQTFQSHEESYHRCSMSINRAINGIQLNNLVDAVGATSLPLDLQEAEQHVKGMEIEARSMKGNERRQCQSRANQCRADLKALRRSIDQAGQRAQAEELMRRSGGGAIGGEPRSFSEGGGD---LRGLGPDLAQQSLARRVLSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRR 241          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.170e-33
Identity = 101/263 (38.40%), Postives = 137/263 (52.09%), Query Frame = 0
Query:    1 MEPFGFEPGPSRA----MITFKQHEDGYHRCSVSINRAINGIQL-------------------NTLVEAVGATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFKIRR 240
            M+P   E  P R+    M  F  +ED Y + +  IN  I+ +                       +V+A  AT L    +E+    +GMEIEVRSM G +R++C ++A Q R+DL ALR+  DQA  RA                 AR+    GGG             ++LAR+ +SL DSRRVL ETE +G  V+ DLE QR+SLLR+R N R+      +AR +LR+I+RR+ RHRL LY +IA L  +IA VLY K RR
Sbjct:    1 MQPLDVEAPPPRSSTSTMTIFNSYEDSYLQAARGINAHISALWSLRAAANXXXXXXXXXXXXPERIVDA--ATRL---FEESESLARGMEIEVRSMTGADRKKCGAKAAQYRSDLLALRRAFDQARARA-----------------ARELGYDGGG-------------RALARTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: W7U7D0_9STRA (Qb-vti1-family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7D0_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.120e-17
Identity = 70/237 (29.54%), Postives = 116/237 (48.95%), Query Frame = 0
Query:   21 EDGYHRCSVSINRAINGIQLNTL-----VEAVGATSLPSFL-----------QEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFKIRRR 241
            ++ Y+R S +INR +N +    L     +     T  PS L            EA   VKG+EIEV+ M   ++R C+ +  Q R DLKA+R++ + A  RA+   L++    S + G  ++ +E                   L  S   L D+R+V++ETE IG G++  +E+QRE L+R+   V++T      AR+++ ++  R +RH+ CL  +I  L   I  V  + +  R
Sbjct:    2 QEEYYRLSRAINRGLNELTRGRLDGGGSISGGHDTMPPSRLLRLVAEIDLDLAEAEGQVKGLEIEVQDMPVKDKRMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQL---SQVSGKRKNIAE------------------RLMSSTEQLHDARKVVDETEHIGEGIIYQMEAQREQLVRASEQVQETNWFTRSARQVMNNMHLRAVRHKACLILIIGFLLVLIGIVFNYGVLAR 217          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-13
Identity = 59/185 (31.89%), Postives = 97/185 (52.43%), Query Frame = 0
Query:   49 ATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGV 233
            A      +++A   V+ ME+E RS+   E+R+   R    RA+L A R ++++A  R   + LM  G    +   +R+ +   G          + A   + RS   L ++RR + ETE +G G+MG+L SQRE+LLR+   V++T    ++ARR+L +I RR   ++  L+ VI  L  +I  V
Sbjct:   46 AAQAKRLVRDAEGTVQAMELEARSVAPSEKRRLTGRIRTYRAELSAARTDLERAQTRGDRDALMAGGSRDAV---SRESASQRGRI--------EEATARMDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFLLGAIGAV 219          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A7S0WIR7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIR7_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 5.990e-12
Identity = 64/234 (27.35%), Postives = 120/234 (51.28%), Query Frame = 0
Query:   13 AMITFKQHEDGYHRCSVSINRAINGIQ-LNTLVEAVGATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQA------GQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFKIR 239
            A   F+Q+E  Y   S   +R I  ++ LN        + +   L++A   +K M++EVRS+  D+ +  Q++  + +ADL +L+  + +A      G  A+AE L   G  ++   G RD                  A Q L ++   L   ++ L +TE +G  ++ DL SQRE+++ S   +R  +   +KAR++L +++RR +++++ +  VI  L A+IA +++ K+R
Sbjct:   12 ASALFRQYEQDYCTKSTDTSRKIGLLEALNGDARRKKLSEIEGDLRQAEDVLKRMDLEVRSLPADQSKPLQAKVKEYKADLASLKTQVQKAAASMPAGDAARAE-LGLGGDYASSSAGQRDRMLT--------------ATQRLEKTNDVLDYGKQTLMQTEELGASILKDLHSQRETIVHSSNTLRGADDNITKARKILSNMARRLMQNKIIMAGVILFLVAAIALIIWAKVR 230          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A4D9CYM8_9STRA (V-SNARE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.750e-11
Identity = 60/197 (30.46%), Postives = 94/197 (47.72%), Query Frame = 0
Query:   13 AMITFKQHEDGYHRCSVSINRAINGIQ------------------LNTLVEAVGATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANV 191
            AM T  Q ++ Y+R S +INR +N +                   L+ L+  V    L   L EA   VKG+EIEV+ M    +  C+ +  Q R DLKA+R++ + A  RA+   L++    S + G  ++ +E                   L  S   L D+R+V++ETE IG G++  +E+QRE L+R+   V
Sbjct:   21 AMDTSGQMQEEYYRLSRAINRGLNELTRGRLDGGGSISGGHDTMPLSRLLRLVAEIDLD--LAEAEGQVKGLEIEVQDMPVKNKSMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQL---SQVSGKRKNIAE------------------RLMSSTEQLHDARKVVDETEHIGEGIIYQMEAQREQLVRASEQV 194          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A383VR47_TETOB (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VR47_TETOB)

HSP 1 Score: 71.6 bits (174), Expect = 1.960e-11
Identity = 59/224 (26.34%), Postives = 119/224 (53.12%), Query Frame = 0
Query:   17 FKQHEDGYHRCSVSINRAINGI-QLNTLVEAVGATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFKIR 239
            F+Q+E  Y   S  I+R I  I  L   +     + + + ++EA+  VK M++E RS+  D+ R   ++  + +ADL +LR+ + QA     +E+   R   + +G G   +S   G    +       A + + ++   L   ++ L ETE +G  ++ DL  QRE++  +R  +   +   SKAR++L ++S+R +++++ ++ ++A L A+I  ++Y K++
Sbjct:    8 FRQYETDYCNKSTDISRKITSIASLTGELRRKKVSEIEADVREADNVVKRMDMEARSLAPDKGRPLLNKVREYKADLASLREQLKQAAAGGGSEDAAAR---AELGLGDNYYSTSAGQRDRM-----LAATERMQKTSDRLQVGKQQLAETEELGVTILQDLARQRETITHARDTLHGADDNISKARKVLGTMSKRIVQNKIIMFGIVAFLLAAIFLIIYVKLK 223          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A835WA92_CHLIN (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WA92_CHLIN)

HSP 1 Score: 69.7 bits (169), Expect = 3.500e-11
Identity = 56/185 (30.27%), Postives = 98/185 (52.97%), Query Frame = 0
Query:   66 MEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLAR--------SRLSLLDSR-----RVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFK 237
            M+ E RS+  D ++Q Q++  + RADL +L++ + +A       E  R              +E+G        LG D A  S A+        ++L   D R     ++L ETE +G G++ +L SQRE+++RSR  +   +   +KAR++L S+S+R L+++L ++ +I  L A+I  ++YFK
Sbjct:    1 MDNEARSVAPDRQKQLQNKVKEYRADLASLKEQLQKARSSTSDFESGR--------------AELG--------LGMDYASSSSAQRDRMLSATAKLEQSDERLKQGKQLLAETEDLGAGILQNLHSQRETIVRSRDTLHGADDNITKARKILSSMSKRMLQNKLIMFGIIGTLLAAIILIIYFK 163          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: UPI001884A58A (vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884A58A)

HSP 1 Score: 70.9 bits (172), Expect = 3.680e-11
Identity = 66/222 (29.73%), Postives = 105/222 (47.30%), Query Frame = 0
Query:   17 FKQHEDGYHRCSVSINRAINGIQLNTLV-EAVGATSLPS--FLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLY 235
            F +HE  Y   S  I   IN IQ +++  +AV      +   + EA++ ++ ME+E R    + R+   +R     A+L+ L K       R    E++         GGAR  +           L  D         RL   +  R+  E+E IG  V+GDL SQRE+LLR+R+ +RDT+    ++ RLL  +  R +++R+ L  V AVL A++   +Y
Sbjct:   11 FTEHEHLYSVLSAEITDKINIIQGHSITGDAVAGPCAEAERLMAEAHELMEQMELEAREQPDELRQALANRVRSYSAELRRLNKEYQNIKHRVCRAEVLE--------GGARSATAAER-------LMDDTELMERTGGRLD--EGYRMCLESEAIGAEVLGDLSSQRETLLRTRSRLRDTDSELGRSSRLLTGMMHRAMQNRVLLLLVAAVLLAAVGYAVY 215          
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Match: A0A0G4EKS9_VITBC (V-SNARE domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EKS9_VITBC)

HSP 1 Score: 67.8 bits (164), Expect = 5.100e-10
Identity = 64/230 (27.83%), Postives = 112/230 (48.70%), Query Frame = 0
Query:   17 FKQHEDGYHRCSVSIN---RAINGIQLNTLVEAVGATSLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNIDQAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSL-ARSRL-----SLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASKARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFK 237
            F  +++ + R  V +    + +N  + +T            F+Q+A Q+++ ME+E R++               R +L  L +    A    + + L+ + GG    GGA + +       GLG    +  Q+ L AR+ L      L +SRR+  ETE IG  ++GDL SQRE++LR+R N+ D       ARR + ++ RR + +++ LY +I V   +I  ++Y+K
Sbjct:    5 FSTYQEDFDRLIVEVEGKLKILNNYEDSTSDLRQAIADCQKFIQQAEQNLRQMEMECRTLPASTAPHIAESMASRRTNLTELSQEFQNARTDLERKALLGQRGGR---GGAFEMN-------GLGSGSHEHRQRLLDARNGLRQGVDQLEESRRLALETEQIGGEILGDLRSQRETILRTRHNLSDVSYNLDWARRTIANMGRRVVANKILLYSIIGVCVLAIIFIIYWK 224          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig85.17524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE6.520e-12181.56V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZAL4_9STRA6.170e-3338.40Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
W7U7D0_9STRA2.120e-1729.54Qb-vti1-family n=1 Tax=Nannochloropsis gaditana Ta... [more]
A0A7S1C7L7_9STRA1.300e-1331.89Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S0WIR7_9CHLO5.990e-1227.35Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A4D9CYM8_9STRA1.750e-1130.46V-SNARE domain-containing protein n=1 Tax=Nannochl... [more]
A0A383VR47_TETOB1.960e-1126.34t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835WA92_CHLIN3.500e-1130.27t-SNARE coiled-coil homology domain-containing pro... [more]
UPI001884A58A3.680e-1129.73vesicle transport through interaction with t-SNARE... [more]
A0A0G4EKS9_VITBC5.100e-1027.83V-SNARE domain-containing protein n=2 Tax=Vitrella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..112
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableGENE3D1.20.5.110coord: 144..216
e-value: 6.3E-16
score: 60.3
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 148..211
e-value: 3.6E-13
score: 49.6
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 53..237
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 53..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 239..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..238
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 151..208
NoneNo IPR availableTMHMMTMhelixcoord: 217..236
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 13..109
e-value: 8.1E-9
score: 37.6
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 56..99
e-value: 1.2E-7
score: 32.0
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 54..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig85contigL-elsbetiae_contig85:15995..21087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig85.17524.1mRNA_L-elsbetiae_contig85.17524.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig85 15995..21087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig85.17524.1 ID=prot_L-elsbetiae_contig85.17524.1|Name=mRNA_L-elsbetiae_contig85.17524.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MEPFGFEPGPSRAMITFKQHEDGYHRCSVSINRAINGIQLNTLVEAVGAT
SLPSFLQEANQHVKGMEIEVRSMKGDERRQCQSRANQCRADLKALRKNID
QAGQRAQAEELMRRGGGSTIGGGARDFSEVGGGPGGLGGLGPDLAQQSLA
RSRLSLLDSRRVLEETEGIGRGVMGDLESQRESLLRSRANVRDTEGAASK
ARRLLRSISRRELRHRLCLYFVIAVLSASIAGVLYFKIRRRLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038407v-SNARE_N_sf
IPR007705Vesicle_trsprt_v-SNARE_N
IPR010989SNARE