prot_L-elsbetiae_contig7937.16903.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7937.16903.1
Unique Nameprot_L-elsbetiae_contig7937.16903.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7937.16903.1 vs. uniprot
Match: D7G8B4_ECTSI (Pescadillo homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8B4_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.120e-16
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0 
Query:   26 EMSRNMMSKKAKRLYGRMQHGLSKRREEVDRLKAKRKNLEAKYDAAPGMA 75
            EMSRNMMSKKAKRLYGRMQHGLSKRREEV+RLKAKRK LEA+YDA  GMA
Sbjct:  684 EMSRNMMSKKAKRLYGRMQHGLSKRREEVERLKAKRKKLEAQYDAPDGMA 733
[Close]
BLAST of mRNA_L-elsbetiae_contig7937.16903.1 vs. uniprot
Match: A0A835Z1N0_9STRA (Pescadillo homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.310e-10
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0 
Query:   26 EMSRNMMSKKAKRLYGRMQHGLSKRREEVDRLKAKRKNLEAKYDAAP 72
            E+S+ MMSKKAKRLYGRMQHG+ K+RE +DRLKAKRK +E++YD  P
Sbjct:  683 ELSKIMMSKKAKRLYGRMQHGIGKKRETIDRLKAKRKAIESQYDKVP 729
[Close]
BLAST of mRNA_L-elsbetiae_contig7937.16903.1 vs. uniprot
Match: F0WEQ7_9STRA (Pescadillo homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEQ7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 5.880e-5
Identity = 25/45 (55.56%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:   26 EMSRNMMSKKAKRLYGRMQHGLSKRREEVDRLKAKRKNLEAKYDA 70
            +M++NMMSKKAKRLY RMQ+GL K+++++ +L+AKR  L+ + DA
Sbjct:  616 DMAKNMMSKKAKRLYDRMQYGLGKKQDKIQQLEAKRARLQQQTDA 660
[Close]
BLAST of mRNA_L-elsbetiae_contig7937.16903.1 vs. uniprot
Match: A0A7S1Y177_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y177_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 8.240e-5
Identity = 24/41 (58.54%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:   26 EMSRNMMSKKAKRLYGRMQHGLSKRREEVDRLKAKRKNLEA 66
            E++++MM KKAKRLY RMQHG  +R+++VDRL+ KR+ +EA
Sbjct:  161 ELAKSMMGKKAKRLYERMQHGNQRRQDKVDRLREKRRKIEA 201
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7937.16903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G8B4_ECTSI1.120e-1690.00Pescadillo homolog n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z1N0_9STRA1.310e-1070.21Pescadillo homolog n=1 Tax=Tribonema minus TaxID=3... [more]
F0WEQ7_9STRA5.880e-555.56Pescadillo homolog n=1 Tax=Albugo laibachii Nc14 T... [more]
A0A7S1Y177_9STRA8.240e-558.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7937contigL-elsbetiae_contig7937:3160..5604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7937.16903.1mRNA_L-elsbetiae_contig7937.16903.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7937 3160..5604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7937.16903.1 ID=prot_L-elsbetiae_contig7937.16903.1|Name=mRNA_L-elsbetiae_contig7937.16903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
GDGEEGGAEEVAPAEEKQTEEQEHHEMSRNMMSKKAKRLYGRMQHGLSKR
REEVDRLKAKRKNLEAKYDAAPGMAKKSKTKTSSKKNKKRRLSAASAAGE
DYVCSHIRETQEEAFVCCRRGG
back to top