prot_L-elsbetiae_contig7928.16889.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7928.16889.1
Unique Nameprot_L-elsbetiae_contig7928.16889.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length150
Homology
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BLAST of mRNA_L-elsbetiae_contig7928.16889.1 vs. uniprot
Match: D7FZ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ15_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.260e-39
Identity = 69/104 (66.35%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:   25 VTLEDGKTWNPFAGDKTHRVAVWDRKKRSMVGGLEAPMRQDLRTLLEDGRYEVYNGQDKKHTGPITFTKTGTMSNDPRGRGRGRPPLSANPAVSLSTSPAIGTT 128
            V LE GKTW+P+AG++THRVAVW+ K R M+GG+ APMR++LR  L +G+YE+YNGQD K+TGP+TF+KTGT SNDPRGRGRGRPP SA P   L TSP   TT
Sbjct:  561 VLLEGGKTWDPYAGEETHRVAVWEPKSRRMIGGVSAPMRRELRAFLAEGKYEIYNGQDGKNTGPVTFSKTGTPSNDPRGRGRGRPPNSAAPVAVLLTSPCRETT 664
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BLAST of mRNA_L-elsbetiae_contig7928.16889.1 vs. uniprot
Match: A0A6H5KQ85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ85_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.570e-36
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 0 
Query:   25 VTLEDGKTWNPFAGDKTHRVAVWDRKKRSMVGGLEAPMRQDLRTLLEDGRYEVYNGQDKKHTGPITFTKTGTMSNDPRGRGRGRPPLSANPAVSLSTS 122
            V LE GKTW+P+AG++THRVAVW+ K  +M+GG+ APMR++LR  L  G+YE+YNGQD K+TGP+TF+K GT SNDPRGRGRGRPP SA P   L TS
Sbjct:  791 VLLEGGKTWDPYAGEETHRVAVWEPKSGNMIGGVSAPMRRELRAFLAKGKYEIYNGQDGKNTGPVTFSKAGTPSNDPRGRGRGRPPNSAAPVAVLLTS 888
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7928.16889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ15_ECTSI1.260e-3966.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ85_9PHAE1.570e-3665.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..150
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7928contigL-elsbetiae_contig7928:2382..3089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7928.16889.1mRNA_L-elsbetiae_contig7928.16889.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7928 2382..3089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7928.16889.1 ID=prot_L-elsbetiae_contig7928.16889.1|Name=mRNA_L-elsbetiae_contig7928.16889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
AELQLRLAISAVAATAAAAAVAAEVTLEDGKTWNPFAGDKTHRVAVWDRK
KRSMVGGLEAPMRQDLRTLLEDGRYEVYNGQDKKHTGPITFTKTGTMSND
PRGRGRGRPPLSANPAVSLSTSPAIGTTAATTVTVTTSAAAANLLPSNNR
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