prot_L-elsbetiae_contig7923.16883.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7923.16883.1
Unique Nameprot_L-elsbetiae_contig7923.16883.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length101
Homology
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BLAST of mRNA_L-elsbetiae_contig7923.16883.1 vs. uniprot
Match: D7G453_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G453_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 3.180e-61
Identity = 87/100 (87.00%), Postives = 96/100 (96.00%), Query Frame = 0 
Query:    1 MSGVGSTGSNVLLIVASLLVIKGLLLPENIRHLGFCPDEDPIRGKDTLPWRMMIESGRECGSVSEVMTKYITAPLAFPGTPEWGMMLNVKEDLAKDAWLQ 100
            MSGVGS GSNVLL+VAS++V+KGLLLPEN+RHLGFCP EDPIRG+DTLPWRMMIESGRECG++ EVMTKY+TAPLAFPGTPEWGMMLN KEDLAKDAWLQ
Sbjct:  110 MSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7923.16883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G453_ECTSI3.180e-6187.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.632
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7923contigL-elsbetiae_contig7923:4541..9014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7923.16883.1mRNA_L-elsbetiae_contig7923.16883.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7923 4513..9212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7923.16883.1 ID=prot_L-elsbetiae_contig7923.16883.1|Name=mRNA_L-elsbetiae_contig7923.16883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
MSGVGSTGSNVLLIVASLLVIKGLLLPENIRHLGFCPDEDPIRGKDTLPW
RMMIESGRECGSVSEVMTKYITAPLAFPGTPEWGMMLNVKEDLAKDAWLQ
*
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