prot_L-elsbetiae_contig7917.16874.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7917.16874.1
Unique Nameprot_L-elsbetiae_contig7917.16874.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length144
Homology
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BLAST of mRNA_L-elsbetiae_contig7917.16874.1 vs. uniprot
Match: A0A6H5L374_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L374_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 9.830e-47
Identity = 75/104 (72.12%), Postives = 94/104 (90.38%), Query Frame = 0 
Query:   34 LERAGRLRGGLEEIVAAMPIRVMKRRLAEMGANPSRLETCLEKDECVSLMLGAMLLSREGLLREKGRMPAWVSRLRGWRWSYHFANKDSRRCWLTMADVARTRW 137
            +E A  L GGLEE+VAAMPI+VMKRRL E+GANP+RL  CLEKDECVSLM+G+MLLSR+GLLR+KG++PAW+SR+RGWRWS+HFA+KD++R W+TM D+ART W
Sbjct:  224 IELARSLSGGLEELVAAMPIKVMKRRLHELGANPARLAACLEKDECVSLMMGSMLLSRDGLLRQKGQLPAWLSRVRGWRWSFHFADKDAKRQWMTMEDLARTPW 327
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7917.16874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L374_9PHAE9.830e-4772.12F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7917contigL-elsbetiae_contig7917:6747..8950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7917.16874.1mRNA_L-elsbetiae_contig7917.16874.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7917 6747..8950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7917.16874.1 ID=prot_L-elsbetiae_contig7917.16874.1|Name=mRNA_L-elsbetiae_contig7917.16874.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp
EDPEEEHRQRRRQRQRQQERRRRWQRRRRRQRALERAGRLRGGLEEIVAA
MPIRVMKRRLAEMGANPSRLETCLEKDECVSLMLGAMLLSREGLLREKGR
MPAWVSRLRGWRWSYHFANKDSRRCWLTMADVARTRWTVRAVL*
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