prot_L-elsbetiae_contig7911.16868.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7911.16868.1
Unique Nameprot_L-elsbetiae_contig7911.16868.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length464
Homology
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BLAST of mRNA_L-elsbetiae_contig7911.16868.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 7.180e-102
Identity = 235/365 (64.38%), Postives = 260/365 (71.23%), Query Frame = 0 
Query:  106 LSLRKRSSELEERLVAARSARASARERREFMKEEAEEARDYGKRLAQEMARLERIARGLPPDEAPSLEKLRRLVATLTEVTLQEQAVLEEGRAREAALRAEIEDFTGA------GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLENSADDPLAVPVESKE-KXXXXXXXGRAVGAASSA-TGVTSVPRTTVVSGTXXXXXXTGA--AGKGGREKKTVLEGRALLAEGLHRIEAAYQAAAAEREQAASRLSRLRLAVARRQREEDAAPGHAELLQYLLRFEELGRHAAGRQEQLRRCRAERSTLALTRELLTKQAGLLETIAGGVEEASQAGKPAREAYMRQITKIIEV 460
            LSLR+R +ELEERL AAR A  SARERREFM+EEAE+ARDYG +LAQEMARL RI R LPPDE+ SLEKLRRLVATLTE+  QEQA LE+G+AREAALR EI +FTG         XXXXXXXXXXXXXXXX                           VLE + DDPLA   E +E +       G  VGA  +A  G  SV RT VV G XXXXXX     A +    KK  LEG+AL AEGLHRIEAAY+ A AERE++A+RLSRLRLAVARRQREEDAA GHAELLQYLLRFEELG+H+  RQEQLRRCRAER  L+LTRELL KQA LLETIAGGVEEAS  GK  REAY+RQI  I+EV
Sbjct:   10 LSLRERGAELEERLQAARIALTSARERREFMEEEAEQARDYGDKLAQEMARLGRITRTLPPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRTEIAEFTGETTGDGXXXXXXXXXXXXXXXXXXXDAAPATAGAPAGEGGGRAGKGREGGGFVLEKAVDDPLAAMAEPQEHQEEDKSGAGNIVGAVPAAGVGTVSVLRTAVVLGXXXXXXXXXXXPAERANHRKKPALEGKALFAEGLHRIEAAYEVAVAEREESAARLSRLRLAVARRQREEDAALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERLMLSLTRELLAKQARLLETIAGGVEEASTGGKGVREAYLRQIKGIVEV 374
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BLAST of mRNA_L-elsbetiae_contig7911.16868.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 3.160e-80
Identity = 221/333 (66.37%), Postives = 241/333 (72.37%), Query Frame = 0 
Query:  136 MKEEAEEARDYGKRLAQEMARLERIARGLPPDEAPSLEKLRRLVATLTEVTLQEQAVLEEGRAREAALRAEIEDFTG------AGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLENSADDPLAVPVESKEKXXXXXXXGRAVGAASSATGVTSVPRTTVVSGTXXXXXXTG---AAGKGGREKKTVLEGRALLAEGLHRIEAAYQAAAAEREQAASRLSRLRLAVARRQREEDAAPGHAELLQYLLRFEELGRHAAGRQEQLRRCRAERSTLALTRELLTKQAGLLETIAGGVEEASQAGKPAREAYMRQITKIIE 459
            M+EEAE+ARDYG +LAQEMARL RI R L PDE+ SLEKLRRLVATLTE+  QEQA LE+G+AREAALRAEI +FTG       GG            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VLE + DDPLA        XXXXXXX                         XXXXXX     A  K    KK  LEG+AL AEGLHRIEAAY+ AAAERE++A+RLSRLRLAVARRQREED A GHAELLQYLLRFEELG+H+  RQEQLRRCRAERSTL+LTRELL  QA LLETIAGGVEEAS+ GK  REAY+RQI  I+E
Sbjct:    1 MEEEAEQARDYGNKLAQEMARLGRITRTLAPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRAEIAEFTGETTEDVGGGGDGLGEKPAAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLEKTVDDPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAERKANHRKKPALEGKALFAEGLHRIEAAYEVAAAEREESAARLSRLRLAVARRQREEDVALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERSTLSLTRELLATQARLLETIAGGVEEASKGGKGVREAYLRQIKGIVE 333
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7911.16868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTA4_9PHAE7.180e-10264.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G045_ECTSI3.160e-8066.37Similar to fidipidine n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 340..360
NoneNo IPR availableCOILSCoilCoilcoord: 112..146
NoneNo IPR availablePANTHERPTHR16441:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN 93coord: 340..459
coord: 95..220
IPR039116Coiled-coil domain-containing protein 93PANTHERPTHR16441FIDIPIDINEcoord: 340..459
coord: 95..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7911contigL-elsbetiae_contig7911:6368..9024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7911.16868.1mRNA_L-elsbetiae_contig7911.16868.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7911 6368..9024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7911.16868.1 ID=prot_L-elsbetiae_contig7911.16868.1|Name=mRNA_L-elsbetiae_contig7911.16868.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
RGRSACGRARITAHSRELWRADCTHHISRTAVIMAVAPGGEQVPDDTTNA
VTSTTTTSIPPEGSTSLLDVDVDVDVDVDVDVDASTGPIEAEPRSQMQQQ
RRAEALSLRKRSSELEERLVAARSARASARERREFMKEEAEEARDYGKRL
AQEMARLERIARGLPPDEAPSLEKLRRLVATLTEVTLQEQAVLEEGRARE
AALRAEIEDFTGAGGAGGDSSSSSSPGAPPSAAALAAASAPAAAASGGLP
EERGGGGAVLENSADDPLAVPVESKEKQEEEKEKGRAVGAASSATGVTSV
PRTTVVSGTSGGGNGTGAAGKGGREKKTVLEGRALLAEGLHRIEAAYQAA
AAEREQAASRLSRLRLAVARRQREEDAAPGHAELLQYLLRFEELGRHAAG
RQEQLRRCRAERSTLALTRELLTKQAGLLETIAGGVEEASQAGKPAREAY
MRQITKIIEVGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039116CCDC93