prot_L-elsbetiae_contig7902.16859.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7902.16859.1
Unique Nameprot_L-elsbetiae_contig7902.16859.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length77
Homology
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: D8LNY9_ECTSI (DNA repair helicase rad5,16, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY9_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 3.230e-39
Identity = 65/75 (86.67%), Postives = 69/75 (92.00%), Query Frame = 0
Query:    1 MRRKMPGAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNL 75
            MR+K PGAKAVVFSQWTHMLDLA+  I+RGGWT RRLDG MSQQ+RESALK FATDESVTVMLVSLKAGGVGLNL
Sbjct:    1 MRKKTPGAKAVVFSQWTHMLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNL 75          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.160e-35
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 MRRKMPGAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            MR+K PGAKAVVFSQWTHMLDLA+  I+RGGWT RRLDG MSQQ+RESALK FATDESVTVMLVSLKAGGVGLNLTA
Sbjct: 1457 MRKKTPGAKAVVFSQWTHMLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNLTA 1533          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: A0A6V1XFX6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XFX6_HETAK)

HSP 1 Score: 102 bits (254), Expect = 1.220e-25
Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    6 PGAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLT 76
            P  KAVVFSQWT+MLDL +  + R GW H RLDG+MSQQ+RE AL+ FAT+  + VML+SLKAGGVGLNLT
Sbjct:   39 PARKAVVFSQWTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 109          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: A0A0A9DBF6_ARUDO (CHR903 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DBF6_ARUDO)

HSP 1 Score: 86.3 bits (212), Expect = 2.470e-19
Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    7 GAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            GAK++VFSQWT  LDL    +SR   +  RLDGT++ Q+RE  +K F+ D+S+ V+L+SLKAGGVG+NLTA
Sbjct:   43 GAKSIVFSQWTAFLDLLQIPLSRNNISFTRLDGTLNHQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTA 113          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: A0A0A9QCJ9_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9QCJ9_ARUDO)

HSP 1 Score: 87.8 bits (216), Expect = 7.370e-19
Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    7 GAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            GAK++VFSQWT  LDL    +SR  ++  RLDGT++ Q+RE  +K F+ D+S+ V+L+SLKAGGVG+NLTA
Sbjct:  222 GAKSIVFSQWTAFLDLLQIPLSRSNFSFARLDGTLNHQKRERVIKEFSEDKSIMVLLMSLKAGGVGINLTA 292          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: B9SN70_RICCO (DNA repair helicase rad5,16, putative n=5 Tax=Ricinus communis TaxID=3988 RepID=B9SN70_RICCO)

HSP 1 Score: 88.6 bits (218), Expect = 8.850e-19
Identity = 40/71 (56.34%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    7 GAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            G+K+++FSQWT  LDL    +SR G ++ RLDGT++QQ+RE  +K F+ D+S+ V+L+SLKAGGVG+NLTA
Sbjct:  878 GSKSILFSQWTAFLDLLQIPLSRSGISYVRLDGTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGINLTA 948          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: UPI0012630830 (DNA repair protein RAD5A isoform X1 n=3 Tax=Pistacia vera TaxID=55513 RepID=UPI0012630830)

HSP 1 Score: 88.6 bits (218), Expect = 8.860e-19
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    7 GAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            G+K+++FSQWT  LDL    +SR   T  RLDGT++QQRRE  LK F+ D +V V+L+SLKAGGVG+NLTA
Sbjct:  883 GSKSIIFSQWTAFLDLLQIPLSRNNITFLRLDGTLTQQRREKVLKQFSEDTNVLVLLMSLKAGGVGINLTA 953          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: A0A0L0H763_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H763_SPIPD)

HSP 1 Score: 88.6 bits (218), Expect = 8.900e-19
Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    9 KAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            KAVVFSQWT+MLDL +  +   G+   RLDG MS+Q R  A++SF TD SVTVMLVSLKAGGVGLNLT+
Sbjct: 1105 KAVVFSQWTNMLDLLEPSLRTYGFGFVRLDGKMSRQDRTDAMESFKTDPSVTVMLVSLKAGGVGLNLTS 1173          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: F2U6I7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6I7_SALR5)

HSP 1 Score: 88.6 bits (218), Expect = 8.930e-19
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MRRKMPGAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            MR++    K +VFSQWT MLDL    +  GG+T  RLDG+MSQQ R  AL +F +D + TV L++L++GGVGLNLTA
Sbjct: 1390 MRQEDESNKCIVFSQWTSMLDLIQRAVESGGYTTARLDGSMSQQERSRALATFKSDPTCTVFLITLRSGGVGLNLTA 1466          
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Match: A0A660KP66_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A660KP66_9ROSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.210e-18
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    4 KMPGAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESALKSFATDESVTVMLVSLKAGGVGLNLTA 77
            +M G+K++VFSQWT  LDL    +SR      RLDGT+SQQ+RE  LK F+ D ++ V+L+SLKAGGVG+NLTA
Sbjct:  885 RMSGSKSIVFSQWTAFLDLLQIPLSRSNIPFVRLDGTLSQQQREKVLKQFSEDSNILVLLMSLKAGGVGINLTA 958          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7902.16859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNY9_ECTSI3.230e-3986.67DNA repair helicase rad5,16, putative (Partial) (F... [more]
A0A6H5KHD4_9PHAE1.160e-3587.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1XFX6_HETAK1.220e-2567.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0A9DBF6_ARUDO2.470e-1956.34CHR903 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0... [more]
A0A0A9QCJ9_ARUDO7.370e-1956.34Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
B9SN70_RICCO8.850e-1956.34DNA repair helicase rad5,16, putative n=5 Tax=Rici... [more]
UPI00126308308.860e-1959.15DNA repair protein RAD5A isoform X1 n=3 Tax=Pistac... [more]
A0A0L0H763_SPIPD8.900e-1966.67Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
F2U6I7_SALR58.930e-1954.55Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A660KP66_9ROSI1.210e-1856.76Uncharacterized protein n=1 Tax=Carpinus fangiana ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..77
e-value: 5.3E-23
score: 83.4
NoneNo IPR availablePANTHERPTHR45626:SF1ATP-DEPENDENT HELICASE ULS1coord: 4..77
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 4..77
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 5..76
e-value: 8.9E-8
score: 32.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7902contigL-elsbetiae_contig7902:2918..4969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7902.16859.1mRNA_L-elsbetiae_contig7902.16859.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7902 2918..4969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7902.16859.1 ID=prot_L-elsbetiae_contig7902.16859.1|Name=mRNA_L-elsbetiae_contig7902.16859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp
MRRKMPGAKAVVFSQWTHMLDLADTCISRGGWTHRRLDGTMSQQRRESAL
KSFATDESVTVMLVSLKAGGVGLNLTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase