prot_L-elsbetiae_contig7897.16846.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7897.16846.1
Unique Nameprot_L-elsbetiae_contig7897.16846.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length154
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7897.16846.1 vs. uniprot
Match: D8LND1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND1_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 5.760e-19
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:   86 MTIRLTPELLGRL--KGPGPKPKIELVLKSAEGGGGPVLIVGGVPYNMNAHKMAVGSEVDILAKTNNSEG 153
            MTIRLTPE+LGRL   GPGPKP+IELVLKSA G GGPVL+VGGV + ++AH+MA+GSEV +LA+T    G
Sbjct:    1 MTIRLTPEVLGRLMMNGPGPKPEIELVLKSA-GEGGPVLLVGGVSHKLDAHQMAIGSEVHVLARTQQQPG 69
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7897.16846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LND1_ECTSI5.760e-1968.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7897contigL-elsbetiae_contig7897:4306..8264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7897.16846.1mRNA_L-elsbetiae_contig7897.16846.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7897 4306..8436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7897.16846.1 ID=prot_L-elsbetiae_contig7897.16846.1|Name=mRNA_L-elsbetiae_contig7897.16846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MIAPPASSGGSLLHRPLSEQDYAAACGSRRPHHAATSSAGCYPFGPNAPA
IELRPRPGCNDEHGEAEGRGSPSPHKEEILKPQTGMTIRLTPELLGRLKG
PGPKPKIELVLKSAEGGGGPVLIVGGVPYNMNAHKMAVGSEVDILAKTNN
SEGG
back to top