prot_L-elsbetiae_contig7527.16418.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7527.16418.1
Unique Nameprot_L-elsbetiae_contig7527.16418.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length218
Homology
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: D8LST1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST1_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.040e-110
Identity = 170/196 (86.73%), Postives = 187/196 (95.41%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYISQV 218
            R P++PIAEALDLVK GAKA FDETVEVAMVLN+DPRKANQTVRGTVQLP+GSGK+VRVAVFAKG+DA AATAAGADIVG +DL+AS+M+G I+FERCVATPEMMS+VGRAARVLGPRGLMPNAK+GSVTRDV AAV+AAKGGQAQFRAGKNG LH+GVGKVSF RSDL+ENVRATMVAISNLKPE+IKGKYISQV
Sbjct:   50 RNPVYPIAEALDLVKDGAKANFDETVEVAMVLNVDPRKANQTVRGTVQLPKGSGKTVRVAVFAKGDDADAATAAGADIVGTEDLVASVMKGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKLGSVTRDVEAAVRAAKGGQAQFRAGKNGALHMGVGKVSFARSDLIENVRATMVAISNLKPEVIKGKYISQV 245          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A6G0WIL3_9STRA (Ribosomal protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIL3_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.230e-75
Identity = 125/193 (64.77%), Postives = 150/193 (77.72%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYI 215
            ++P+  + +AL L K  A  KFDETV++ + L +DPRK NQ+VRG V LP G+GK VRVAVFAKG+ A  A AAGA IVGA+DLLA I  GKI+F+RCVATP+MM LVGR ARVLGPRGLMPN K+G+VT+DV AA++AAKGGQ +FRA K G++H GVGKVSF    LVEN+RA MVAI   KPE  KGKYI
Sbjct:   40 KKPLLSLPDALTLCKQHAVRKFDETVDIVVELGVDPRKPNQSVRGVVMLPNGTGKVVRVAVFAKGDKADEARAAGATIVGAEDLLADIQAGKIDFDRCVATPDMMGLVGRVARVLGPRGLMPNPKLGTVTQDVTAAIQAAKGGQVEFRAEKKGIVHAGVGKVSFSDEALVENIRAFMVAIGEAKPEGAKGKYI 232          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A067C8G8_SAPPC (Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8G8_SAPPC)

HSP 1 Score: 235 bits (599), Expect = 1.420e-74
Identity = 122/193 (63.21%), Postives = 150/193 (77.72%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYI 215
            ++P   +  AL   K  A  KFDETV++ + L +DPRK NQ+VRG V LP G+GK+VRVAVFAKGE A  A AAGA IVGA+DLLA I  GK++F+RC+ATP+MM+LVGR ARVLGPRGLMPN K+G+VT+DV+AA+ AAKGGQ +FRA K G++H GVGKVSF    L+EN+RA MVAI + KPE  KGKYI
Sbjct:   41 KKPFLDLPTALANCKENAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFAKGEKAEEAKAAGATIVGAEDLLADIQAGKLDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVSAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYI 233          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A485K7N6_9STRA (Ribosomal protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7N6_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.010e-74
Identity = 123/193 (63.73%), Postives = 150/193 (77.72%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYI 215
            ++P+  + +AL   +  A  KFDETV++ + L +DPRK NQ+VRG V LP G+GK VRVAVFAKGE A  A AAGA IVGA+DLLA I  GK++F+RCVATP+MM+LVGR ARVLGPRGLMPN K+G+VT DV AA++AAKGGQ +FRA K GV+H GVGKVSF  + L+EN+RA MVAI   KPE  KGKYI
Sbjct:   40 KKPLLLLPQALTTCREHAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKVVRVAVFAKGEKAEEAKAAGASIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTNDVTAAIQAAKGGQVEFRAEKKGVVHAGVGKVSFTDAALIENIRAFMVAIGEAKPEGAKGKYI 232          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A024UFR5_9STRA (Ribosomal protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UFR5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 4.310e-74
Identity = 122/193 (63.21%), Postives = 150/193 (77.72%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYI 215
            ++P+ P+  AL   K GA  KFDETV++ + L +DPRK NQ+VR  V LP G+GK VRVAVFAKG+ A  A AAGA IVGA+DLLA I  GK++F+RCVATP+MM+LVGR ARVLGPRGLMPN K+G+VT+DV AA+KAA+GGQ +FRA K G++H GVGKVSF    L+EN+RA MVA+   KPE  KGKYI
Sbjct:   42 KKPLLPLNVALVECKQGAVRKFDETVDIVVELGVDPRKPNQSVRSVVSLPHGTGKVVRVAVFAKGDKADEARAAGAAIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAIKAAQGGQVEFRAEKKGIVHAGVGKVSFSDEALLENIRAFMVAVGEAKPEGAKGKYI 234          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: UPI001A95871A (50S ribosomal protein L1 n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A95871A)

HSP 1 Score: 231 bits (590), Expect = 1.250e-73
Identity = 120/196 (61.22%), Postives = 149/196 (76.02%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYISQV 218
            R  ++ + +A+ L+K+GAKAKFDETVE+AM L IDPR A+Q VRG V LP G+GK+VRVAVFA+G+ A  ATAAGADIVGADDL   I+ G INF+RC+ATP+MM +VGR  +VLGPRGLMPN K+G+VT DVA AV+AAK G  +FRA K G++H G+GK SF    L EN+RA + AIS  KP   KG YI +V
Sbjct:   17 RDALYSLTDAVTLIKNGAKAKFDETVEIAMNLGIDPRHADQMVRGVVNLPNGTGKTVRVAVFARGDKADQATAAGADIVGADDLAEQILAGNINFDRCIATPDMMGVVGRLGKVLGPRGLMPNPKLGTVTPDVAGAVQAAKAGSVEFRAEKTGIVHAGIGKASFSEDALAENIRAFIDAISRAKPTGAKGTYIEKV 212          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A143DB78_9PROT (50S ribosomal protein L1 n=4 Tax=Haematospirillum TaxID=1804663 RepID=A0A143DB78_9PROT)

HSP 1 Score: 229 bits (585), Expect = 6.740e-73
Identity = 118/196 (60.20%), Postives = 152/196 (77.55%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYISQV 218
            R  ++ + EA+ LVK G++AKFDET+EVA+ L +DPR A+Q VRG V+LP G+GK+VRVAVFAK   A  A AAGADIVGA++LL SI +GKI+F+RC+A+P+MM LVGR A++LGPRGLMPN K+G+VT DVA+AVKAAK GQ QFR  K G++H G+GK SF+   LVENVRA + A+   KP   KG Y+ +V
Sbjct:   17 REKLYTLVEAVGLVKGGSRAKFDETIEVAVNLGVDPRHADQMVRGVVELPHGTGKAVRVAVFAKAGKADEAKAAGADIVGAEELLESIQQGKIDFDRCIASPDMMGLVGRVAKILGPRGLMPNPKLGTVTVDVASAVKAAKAGQVQFRVEKAGIVHAGIGKASFDEGKLVENVRAFVDALQKAKPSGAKGSYMQKV 212          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A420DQY0_9RHOB (50S ribosomal protein L1 n=1 Tax=Sulfitobacter guttiformis TaxID=74349 RepID=A0A420DQY0_9RHOB)

HSP 1 Score: 229 bits (584), Expect = 9.560e-73
Identity = 118/190 (62.11%), Postives = 148/190 (77.89%), Query Frame = 0
Query:   29 IAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYISQV 218
            + EA+ L+K+ +  KFDET+E+AM L IDPR A+Q VRG V LP G+GK VRVAVFA+G  A  ATAAGADIVGA+DL+  IM GKI F+RC+ATP+MM +VGR  +VLGPR LMPN KVG+VT DVAAAVKAAKGG+ QF+A K GV+H GVGKVSF+ + LVEN+RA + A++  +P   KG Y+ Q+
Sbjct:   23 VEEAVSLIKANSNTKFDETIEIAMNLGIDPRHADQMVRGVVGLPNGTGKDVRVAVFARGPKADEATAAGADIVGAEDLMDIIMGGKIEFDRCIATPDMMPVVGRLGKVLGPRNLMPNPKVGTVTMDVAAAVKAAKGGEVQFKAEKGGVVHAGVGKVSFDEAKLVENIRAFVSAVAKARPAGAKGSYLQQI 212          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: W4FM96_9STRA (Ribosomal protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM96_9STRA)

HSP 1 Score: 230 bits (587), Expect = 9.640e-73
Identity = 119/193 (61.66%), Postives = 148/193 (76.68%), Query Frame = 0
Query:   23 RRPMHPIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYI 215
            ++P+ P+  AL   K GA  KFDETV++ + L +DPRK NQ+VR  V LP G+GK VRVAVFAKG+ A  A AAGA IVGA+DLLA I  GK++F+RCVATP+MM+LVGR ARVLGPRGLMPN K+G+VT+DV AA+ AA GGQ +FRA K G++H GVGKVSF    L++N+RA MVA+   KPE  KGKY+
Sbjct:   41 KKPLVPLNVALAACKQGAVRKFDETVDIVVELGVDPRKPNQSVRSVVTLPHGTGKVVRVAVFAKGDKADEARAAGATIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAITAAMGGQVEFRAEKKGIVHAGVGKVSFSDDALLDNIRAFMVAVGEAKPEGAKGKYV 233          
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Match: A0A3M2EF17_9PROT (50S ribosomal protein L1 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2EF17_9PROT)

HSP 1 Score: 229 bits (584), Expect = 1.160e-72
Identity = 119/191 (62.30%), Postives = 147/191 (76.96%), Query Frame = 0
Query:   28 PIAEALDLVKSGAKAKFDETVEVAMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADIVGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGSVTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMVAISNLKPEIIKGKYISQV 218
            P+ EA+ LVK  AKAKFDET+E+AM L +DPR A+Q VRGTV LP G+GK+VRVAVFA+G  A  A  AGADIVGA+DL+  I  G+I+F+RC+ATP+MM LVGR  ++LGPR LMPN KVG+VT DVA AVKAAKGGQ QFRA K GV+H GVGK SF+   L+ENVRA + A++  +P   KG YI ++
Sbjct:   22 PLEEAVKLVKENAKAKFDETIEIAMSLGVDPRHADQMVRGTVTLPNGTGKNVRVAVFARGPKADEAREAGADIVGAEDLVERIQAGQIDFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTVTMDVAEAVKAAKGGQVQFRADKGGVVHAGVGKASFDEKALLENVRAFIDAVNKARPSGAKGTYIKRI 212          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7527.16418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST1_ECTSI1.040e-11086.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0WIL3_9STRA1.230e-7564.77Ribosomal protein n=1 Tax=Aphanomyces euteiches Ta... [more]
A0A067C8G8_SAPPC1.420e-7463.21Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=47... [more]
A0A485K7N6_9STRA2.010e-7463.73Ribosomal protein n=1 Tax=Aphanomyces stellatus Ta... [more]
A0A024UFR5_9STRA4.310e-7463.21Ribosomal protein n=4 Tax=Aphanomyces TaxID=100860... [more]
UPI001A95871A1.250e-7361.2250S ribosomal protein L1 n=1 Tax=Azospirillum sp. ... [more]
A0A143DB78_9PROT6.740e-7360.2050S ribosomal protein L1 n=4 Tax=Haematospirillum ... [more]
A0A420DQY0_9RHOB9.560e-7362.1150S ribosomal protein L1 n=1 Tax=Sulfitobacter gut... [more]
W4FM96_9STRA9.640e-7361.66Ribosomal protein n=3 Tax=Aphanomyces astaci TaxID... [more]
A0A3M2EF17_9PROT1.160e-7262.3050S ribosomal protein L1 n=1 Tax=Alphaproteobacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 37..216
e-value: 2.6E-42
score: 144.9
NoneNo IPR availableGENE3D3.30.190.20coord: 31..218
e-value: 9.1E-68
score: 229.6
NoneNo IPR availablePANTHERPTHR36427FAMILY NOT NAMEDcoord: 6..217
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 74..165
e-value: 9.1E-68
score: 229.6
IPR005878Ribosomal protein L1, bacterial-typeTIGRFAMTIGR01169TIGR01169coord: 16..218
e-value: 3.3E-77
score: 256.9
IPR002143Ribosomal protein L1PIRSFPIRSF002155RPL1p_RPL1a_RPL10e_RPL1ocoord: 3..218
e-value: 3.1E-60
score: 201.3
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 19..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7527contigL-elsbetiae_contig7527:2278..8236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7527.16418.1mRNA_L-elsbetiae_contig7527.16418.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7527 2278..8237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7527.16418.1 ID=prot_L-elsbetiae_contig7527.16418.1|Name=mRNA_L-elsbetiae_contig7527.16418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp
KSKNKKNRKSSPSQAQAAAAAARRPMHPIAEALDLVKSGAKAKFDETVEV
AMVLNIDPRKANQTVRGTVQLPRGSGKSVRVAVFAKGEDAAAATAAGADI
VGADDLLASIMEGKINFERCVATPEMMSLVGRAARVLGPRGLMPNAKVGS
VTRDVAAAVKAAKGGQAQFRAGKNGVLHIGVGKVSFERSDLVENVRATMV
AISNLKPEIIKGKYISQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028364Ribosomal_L1/biogenesis
IPR016095Ribosomal_L1_3-a/b-sand
IPR005878Ribosom_L1_bac-type
IPR002143Ribosomal_L1
IPR023674Ribosomal_L1-like