prot_L-elsbetiae_contig750.16398.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig750.16398.1
Unique Nameprot_L-elsbetiae_contig750.16398.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length532
Homology
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BLAST of mRNA_L-elsbetiae_contig750.16398.1 vs. uniprot
Match: D7FII0_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.260e-47
Identity = 216/538 (40.15%), Postives = 260/538 (48.33%), Query Frame = 0 
Query:    1 MVPPENQKRGRSSSRSSSNLDAFPKRKMPTSTSTTSGVVDEVLVEICTPGARSAIHFVEGFSAS------RPWSGGXXXXXXXXXXXATRGRGRGLLSPTLFSRKPAASVPAASSFDTAGSVSAAAAASGKHHRRTASP-LDGVCLTLLGVSTGLKTPGVDTWAVAQALVDSSVDLRCRNVRGMTPLHLACSAGQVDVAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGEAVDTLSSPAETTPLHLSAGFSRLSCVHELLGRGADPSRRNKRGATPLDMVGTLIIPVDPDTDASXXXXXXKASAAREAFEKKLEQGSWVKVALARAQRWQRRRDAVLVWEALRKGAAGAXXXXXXXXXXXXPEGGSVGAPRKSRIERGGXXXXXXXXXXXXXXXXXXXXXAVVGGQGWLVAQLCMHPDEALMKSVILFL 531
            MVPP N+++      ++   D F +R     +ST++  V +V++E CTPGARS I FV+  +A+      RP  G               G  R +  P L  ++   S PA+S   TA   + A+  +GKHHRRT++P LDG  LTLLGVS  L TP  D W VA+AL++S+ DLR RN RGMTPLHLACS G+VD A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                             DAGEAVD+ S+PA                  ELL RGADPSRRNKRGATPLDM G       P+T +       KA  AREAFEKKL +G  V++AL  AQRWQR+R  VLV E LRK A                +GG++    + R+ER                       + V  QGWLVAQLC+H D ALMK VI FL
Sbjct:    1 MVPPRNKQQS-----TTIGFDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAAASCRGRPCGGNTTCY--------AHGSSRDVRPPVLLRQQ---SAPASS---TARPSAEASVYTGKHHRRTSTPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALL----------------------------------------------------------DAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGG-------PETMSG------KAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGAS-----DGGALAG--RERLER----DHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL 437
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig750.16398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FII0_ECTSI1.260e-4740.15Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 176..191
score: 41.5
coord: 224..238
score: 38.3
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 274..303
e-value: 1.0
score: 18.4
coord: 341..370
e-value: 3.2
score: 16.7
coord: 307..336
e-value: 8.9E-4
score: 28.6
coord: 208..237
e-value: 5.2
score: 16.0
coord: 175..204
e-value: 1.8E-5
score: 34.2
coord: 241..270
e-value: 1.5
score: 17.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 307..339
score: 12.502
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 175..207
score: 14.559
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 241..273
score: 12.209
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 341..373
score: 9.912
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 274..306
score: 10.74
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 208..240
score: 11.327
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 145..386
e-value: 2.3E-63
score: 216.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 156..381
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 279..371
e-value: 4.6E-13
score: 49.6
coord: 159..237
e-value: 3.1E-12
score: 46.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 158..379
score: 67.063
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 208..336
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 157..272
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 208..336
coord: 157..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig750contigL-elsbetiae_contig750:3205..6566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig750.16398.1mRNA_L-elsbetiae_contig750.16398.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig750 3205..6566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig750.16398.1 ID=prot_L-elsbetiae_contig750.16398.1|Name=mRNA_L-elsbetiae_contig750.16398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=532bp
MVPPENQKRGRSSSRSSSNLDAFPKRKMPTSTSTTSGVVDEVLVEICTPG
ARSAIHFVEGFSASRPWSGGGGGGGGTSSGGATRGRGRGLLSPTLFSRKP
AASVPAASSFDTAGSVSAAAAASGKHHRRTASPLDGVCLTLLGVSTGLKT
PGVDTWAVAQALVDSSVDLRCRNVRGMTPLHLACSAGQVDVAKVLLLAGA
DSHARDHRSRCPLHMAALSGSSELVTSLLACGADPNKASDVGTTALHNAA
LLGRVEVSRALLMAGADANCADHNSFSPLYLASQNGHTHLVLDLLAAGAD
AGIKTNRGFTPLHVAARCGRLPVLKALLDAGEAVDTLSSPAETTPLHLSA
GFSRLSCVHELLGRGADPSRRNKRGATPLDMVGTLIIPVDPDTDASAGGG
GGKASAAREAFEKKLEQGSWVKVALARAQRWQRRRDAVLVWEALRKGAAG
AAAGAAADAVSDAPEGGSVGAPRKSRIERGGGDGGGGSKRCRRRRPQGRG
GGAVVGGQGWLVAQLCMHPDEALMKSVILFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom