prot_L-elsbetiae_contig7441.16331.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7441.16331.1
Unique Nameprot_L-elsbetiae_contig7441.16331.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig7441.16331.1 vs. uniprot
Match: D7FP32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP32_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.570e-16
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    2 DVFSRFWPLLLWAAASSSEIEDGLLYRWMQDASECDAELPRGAALWELVAGGKEVKNEAGEV-TRPAKEPTLQAKKGEL 79
            ++FS FWPLLLWA +SS EIEDGLLYRW++DAS   A   +    ++LVAG    K++ GE  T  A+  TL+A+KG +
Sbjct:   53 ELFSEFWPLLLWAVSSSDEIEDGLLYRWIKDASGYGASFSKSNKFFKLVAGETVAKDKTGEAATEAAESVTLRAQKGGM 131
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BLAST of mRNA_L-elsbetiae_contig7441.16331.1 vs. uniprot
Match: A0A6H5JLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.390e-12
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:    2 DVFSRFWPLLLWAAASSSEIEDGLLYRWMQDASECDAELPRGAALWELVAG 52
            ++ S FWPLL WAA+SS EIEDGLLYRWM+DAS+  A   +    ++LVAG
Sbjct:   27 ELLSEFWPLLRWAASSSDEIEDGLLYRWMKDASDYGASFSKSNKFFKLVAG 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7441.16331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP32_ECTSI1.570e-1650.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLT9_9PHAE1.390e-1258.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7441contigL-elsbetiae_contig7441:3811..5175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7441.16331.1mRNA_L-elsbetiae_contig7441.16331.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7441 1503..6094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7441.16331.1 ID=prot_L-elsbetiae_contig7441.16331.1|Name=mRNA_L-elsbetiae_contig7441.16331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MDVFSRFWPLLLWAAASSSEIEDGLLYRWMQDASECDAELPRGAALWELV
AGGKEVKNEAGEVTRPAKEPTLQAKKGELFFPRATNAVRSTYACSTRAFA
GIYWFESEARD*
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