prot_L-elsbetiae_contig7433.16323.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7433.16323.1
Unique Nameprot_L-elsbetiae_contig7433.16323.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length227
Homology
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BLAST of mRNA_L-elsbetiae_contig7433.16323.1 vs. uniprot
Match: A0A6H5JGY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY4_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 4.300e-56
Identity = 125/232 (53.88%), Postives = 140/232 (60.34%), Query Frame = 0 
Query:    1 MGSIRGCLPPLEGNRRRRTLDGY---EMGVGPHA---TGGGDALSDLQTKLAHIQWRKHANDKSIRKALDTTKRLQERDMMLQLSVDREGERERWTEAIVRDELARPAEISEMFLKDWERREEENRTRQLQETTLHLKSLKRVERAVQSKQGGWGSTSTTAXXXXXGSSAEG-GGREQEVNTQDAAQLLKERLRRLRIGVKEKRRELRRSASSSKDLKGSFSATNFKTGRGR 225
            MGS+   LPPLEGNRR R  D +      V P +   +G GDALSDL TKLAHIQWR+HANDKSIRKAL+TTKRLQERDMMLQLSVDREGE                                         T LHLKSLKRVER V SK+      S           AEG GG E+ +  Q+  + LKERLRR+R+GVKEKRRELRRSAS SKD +G+FSAT FKTGRGR
Sbjct:    1 MGSVYRALPPLEGNRRCRPQDEFGSSRENVPPRSIIVSGSGDALSDLHTKLAHIQWRRHANDKSIRKALETTKRLQERDMMLQLSVDREGE-----------------------------------------TKLHLKSLKRVERTVTSKK-----CSAITAQRPESRDAEGRGGGERALEQQEDDEALKERLRRVRVGVKEKRRELRRSASYSKDQRGTFSATGFKTGRGR 186
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7433.16323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGY4_9PHAE4.300e-5653.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7433contigL-elsbetiae_contig7433:1159..5247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7433.16323.1mRNA_L-elsbetiae_contig7433.16323.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7433 1111..5462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7433.16323.1 ID=prot_L-elsbetiae_contig7433.16323.1|Name=mRNA_L-elsbetiae_contig7433.16323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MGSIRGCLPPLEGNRRRRTLDGYEMGVGPHATGGGDALSDLQTKLAHIQW
RKHANDKSIRKALDTTKRLQERDMMLQLSVDREGERERWTEAIVRDELAR
PAEISEMFLKDWERREEENRTRQLQETTLHLKSLKRVERAVQSKQGGWGS
TSTTAQQQSEGSSAEGGGREQEVNTQDAAQLLKERLRRLRIGVKEKRREL
RRSASSSKDLKGSFSATNFKTGRGRW*
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