prot_L-elsbetiae_contig7428.16313.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7428.16313.1
Unique Nameprot_L-elsbetiae_contig7428.16313.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length269
Homology
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BLAST of mRNA_L-elsbetiae_contig7428.16313.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.430e-5
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 MVDLQNNKCAYPGCRKGSSFGMMGTKKRQFCAGHAKDGM 39
            MVD+ N +C +PGC K  SFG  G+KK++FCA HA  GM
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7428.16313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMB1_ECTSI3.430e-556.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7428contigL-elsbetiae_contig7428:5851..6657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7428.16313.1mRNA_L-elsbetiae_contig7428.16313.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7428 4515..6706 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7428.16313.1 ID=prot_L-elsbetiae_contig7428.16313.1|Name=mRNA_L-elsbetiae_contig7428.16313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MVDLQNNKCAYPGCRKGSSFGMMGTKKRQFCAGHAKDGMVNLQNKKCAHQ
SCSKAPLCGVARTKKREFCGGHAKEGMASVRDTSGVRNSTTTTAPPTRPS
LQTKIRRGGAIGDIMSGGASSSSSRAVQPRTSTSSPGVQAATEELVSRST
SWPNSSEGHGDGTTSSVVKAEEVELSSSVVTGDVSVEEGTARNKRRHRAP
TPAAPANSDAFSLGKSSNSRRSGKRTRRTAEDDVVVLEHNDQTAATGSAA
SETGNARPGSSVAVKAEH*
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