|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1190 |
| Cds size | 807 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816827.3637614-UTR-L-elsbetiae_contig7428:4514..4814 | 1622816827.3637614-UTR-L-elsbetiae_contig7428:4514..4814 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7428 4515..4814 - |
| 1691683843.7600865-UTR-L-elsbetiae_contig7428:4514..4814 | 1691683843.7600865-UTR-L-elsbetiae_contig7428:4514..4814 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7428 4515..4814 - |
| 1622816827.3768919-UTR-L-elsbetiae_contig7428:5816..5850 | 1622816827.3768919-UTR-L-elsbetiae_contig7428:5816..5850 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7428 5817..5850 - |
| 1691683843.7724702-UTR-L-elsbetiae_contig7428:5816..5850 | 1691683843.7724702-UTR-L-elsbetiae_contig7428:5816..5850 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7428 5817..5850 - |
| 1622816827.3992398-UTR-L-elsbetiae_contig7428:6657..6706 | 1622816827.3992398-UTR-L-elsbetiae_contig7428:6657..6706 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7428 6658..6706 - |
| 1691683843.8025537-UTR-L-elsbetiae_contig7428:6657..6706 | 1691683843.8025537-UTR-L-elsbetiae_contig7428:6657..6706 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7428 6658..6706 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816827.3893366-CDS-L-elsbetiae_contig7428:5850..6657 | 1622816827.3893366-CDS-L-elsbetiae_contig7428:5850..6657 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7428 5851..6657 - |
| 1691683843.785041-CDS-L-elsbetiae_contig7428:5850..6657 | 1691683843.785041-CDS-L-elsbetiae_contig7428:5850..6657 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7428 5851..6657 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7428.16313.1 >prot_L-elsbetiae_contig7428.16313.1 ID=prot_L-elsbetiae_contig7428.16313.1|Name=mRNA_L-elsbetiae_contig7428.16313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MVDLQNNKCAYPGCRKGSSFGMMGTKKRQFCAGHAKDGMVNLQNKKCAHQ
SCSKAPLCGVARTKKREFCGGHAKEGMASVRDTSGVRNSTTTTAPPTRPS
LQTKIRRGGAIGDIMSGGASSSSSRAVQPRTSTSSPGVQAATEELVSRST
SWPNSSEGHGDGTTSSVVKAEEVELSSSVVTGDVSVEEGTARNKRRHRAP
TPAAPANSDAFSLGKSSNSRRSGKRTRRTAEDDVVVLEHNDQTAATGSAA
SETGNARPGSSVAVKAEH* back to topmRNA from alignment at L-elsbetiae_contig7428:4515..6706- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7428.16313.1 ID=mRNA_L-elsbetiae_contig7428.16313.1|Name=mRNA_L-elsbetiae_contig7428.16313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2192bp|location=Sequence derived from alignment at L-elsbetiae_contig7428:4515..6706- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGGGACCAAGAACCGACAGTTCTGCAGCGGACACGCCAAGGAAGGGA
TGGTGGACCTCCAAAACAATAAGTGCGCATACCCGGGTTGCCGCAAGGGT
TCGTCCTTTGGGATGATGGGGACCAAGAAGCGGCAGTTCTGCGCAGGACA
TGCCAAAGATGGGATGGTAAACCTCCAAAACAAGAAGTGCGCACACCAGA
GTTGCAGCAAGGCTCCGTTGTGTGGTGTGGCGAGGACCAAGAAGCGAGAG
TTCTGCGGCGGACACGCCAAGGAGGGAATGGCATCCGTGAGGGACACAAG
TGGGGTTCGAAATAGTACCACAACAACAGCCCCACCGACACGCCCTTCCC
TCCAGACGAAGATACGTAGGGGGGGTGCGATAGGCGACATCATGTCTGGA
GGGGCCAGCAGTAGCAGCAGCCGAGCCGTCCAGCCTCGGACGTCCACTTC
CTCCCCAGGAGTTCAAGCGGCGACCGAAGAGTTGGTCAGCCGTTCCACAT
CTTGGCCGAACTCGTCCGAAGGCCATGGCGATGGAACCACTTCTTCCGTG
GTAAAGGCGGAGGAAGTGGAGCTTTCATCCAGTGTTGTCACCGGAGATGT
CTCGGTCGAGGAGGGCACAGCCAGAAACAAGCGAAGACACCGCGCTCCGA
CACCGGCCGCTCCGGCGAACTCTGATGCCTTCTCATTGGGCAAGAGCAGC
AACAGTCGGAGGAGCGGCAAGCGAACCCGTCGAACCGCCGAGGACGACGT
GGTTGTCCTGGAGCACAACGACCAAACGGCGGCGACTGGTTCTGCAGCCA
GCGAGACGGGCAACGCGAGGCCGGGTTCAAGTGTCGCAGTCAAGGCTGAG
CACTAGATGACCATGTCTCATGCGGATGTCAAACTTACAGGTGAGCGACA
AAGCGTCCTGCCGAGTGCGTTGCTATTCGTTTTGCTGGGGGGGGCGTTCT
CTGAATCTCAATGGATGTAGGTCATGGAGTTTCGTAGTGATGCGTTTGAC
AAGTAGTATTAGTGTCATCTAGCAAGGAGCAGCGTGCAGGAAACTAGGTC
GCAGTTGTCGCGGATTTTCGGCTGCTTTCGCAGATTCTCGATTGCTGGTG
TTGGCTGTCATCTTAGTCTTGCCGACCAACGTTCCGTCACTTCCTTGATC
GATCCTGATCCTGTTTGATGGAGGTGGTACTCGCCTTTGGACTCGCAAAC
CTCGAGAAAAAATTGATTCTGAACGGGCGCAGTTGGATCCACTAAAATGT
AACGATCTGAAGCCGGTCTGCAGCGCTGTTGCGATTTTGGACACCTTGAT
GCAATCTTGTGTTTTTTTCCAGAAAAAAGTCGTGTTGTCCGTCACCAGTG
TTGTTGCGATGTCGCAAAAGCTTTGCTTGGCGTGATAATCTCCACCCATG
ACTGGACTCCTTGTAAAACACCACATATGATATGTCGGGGCTTTTCGGTA
CCGTACCCGACTGCTGGCCGGATTGCGCCTCCTCCAAAGCATGATTGAAA
CACCGCATACCCCCTGCGAAGTACATACATGCGGCTTGTTGTAGTTGTGA
TGAGTCTGTTTCGAGGGTGCTTATTTGTGACGAAAGTCCTCCCAAATCCC
AGGGTCTAGTGCACAAGAAAATCAATAGCTCCTGTTTCTCAGGACATTCC
GCACCATGCGGGTCTCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCC
CCCCCCTCGCCGACCAAACGAGGGGCGCCGGGAGGGCGGTAGGGGCAAAC
NNNNNNNNNNCCCCCCCCACCCCGGGGCTGGTGACCAAAAAAAAACAATG
CCTCCTCTTCCCCGGACAATCCCCCCCCATGGGGGCGTTCCCCCCCCCCC
CCCCCCCCTTCGTATTCCTTGGCATGATCCGGACATATAAAGGTGGCGGC
CAGGTGGAAGCATATGGCCATACAGGCACGGGGCACCCCACGGAGCCCGT
GGCTTGTGTCCGAACAGTGGTTGTCAGTCACAGCAACGGGGCGAGTTGGC
TGATGTGATTTTGCTGTATTGAGCTGTCACACGAAGCGCCATACGGATGA
GCATGCGTGGTGAAAATGAGCGACAGCGAACCCCCAGGCGACGGGATTCG
CGTAGGTTCAAGCCCGTCGGGAACGGGTACGAATATATCCTATATTTTAT
ATTTTCATCACAGAGAGCTCCGTCATCTTGACAACGGCAGGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7428:4515..6706- >mRNA_L-elsbetiae_contig7428.16313.1 ID=mRNA_L-elsbetiae_contig7428.16313.1|Name=mRNA_L-elsbetiae_contig7428.16313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1614bp|location=Sequence derived from alignment at L-elsbetiae_contig7428:4515..6706- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGACCTCCAAAACAATAAGTGCGCATACCCGGGTTGCCGCAAGGG
TTCGTCCTTTGGGATGATGGGGACCAAGAAGCGGCAGTTCTGCGCAGGAC
ATGCCAAAGATGGGATGGTAAACCTCCAAAACAAGAAGTGCGCACACCAG
AGTTGCAGCAAGGCTCCGTTGTGTGGTGTGGCGAGGACCAAGAAGCGAGA
GTTCTGCGGCGGACACGCCAAGGAGGGAATGGCATCCGTGAGGGACACAA
GTGGGGTTCGAAATAGTACCACAACAACAGCCCCACCGACACGCCCTTCC
CTCCAGACGAAGATACGTAGGGGGGGTGCGATAGGCGACATCATGTCTGG
AGGGGCCAGCAGTAGCAGCAGCCGAGCCGTCCAGCCTCGGACGTCCACTT
CCTCCCCAGGAGTTCAAGCGGCGACCGAAGAGTTGGTCAGCCGTTCCACA
TCTTGGCCGAACTCGTCCGAAGGCCATGGCGATGGAACCACTTCTTCCGT
GGTAAAGGCGGAGGAAGTGGAGCTTTCATCCAGTGTTGTCACCGGAGATG
TCTCGGTCGAGGAGGGCACAGCCAGAAACAAGCGAAGACACCGCGCTCCG
ACACCGGCCGCTCCGGCGAACTCTGATGCCTTCTCATTGGGCAAGAGCAG
CAACAGTCGGAGGAGCGGCAAGCGAACCCGTCGAACCGCCGAGGACGACG
TGGTTGTCCTGGAGCACAACGACCAAACGGCGGCGACTGGTTCTGCAGCC
AGCGAGACGGGCAACGCGAGGCCGGGTTCAAGTGTCGCAGTCAAGGCTGA
GCACTAGATGGTGGACCTCCAAAACAATAAGTGCGCATACCCGGGTTGCC
GCAAGGGTTCGTCCTTTGGGATGATGGGGACCAAGAAGCGGCAGTTCTGC
GCAGGACATGCCAAAGATGGGATGGTAAACCTCCAAAACAAGAAGTGCGC
ACACCAGAGTTGCAGCAAGGCTCCGTTGTGTGGTGTGGCGAGGACCAAGA
AGCGAGAGTTCTGCGGCGGACACGCCAAGGAGGGAATGGCATCCGTGAGG
GACACAAGTGGGGTTCGAAATAGTACCACAACAACAGCCCCACCGACACG
CCCTTCCCTCCAGACGAAGATACGTAGGGGGGGTGCGATAGGCGACATCA
TGTCTGGAGGGGCCAGCAGTAGCAGCAGCCGAGCCGTCCAGCCTCGGACG
TCCACTTCCTCCCCAGGAGTTCAAGCGGCGACCGAAGAGTTGGTCAGCCG
TTCCACATCTTGGCCGAACTCGTCCGAAGGCCATGGCGATGGAACCACTT
CTTCCGTGGTAAAGGCGGAGGAAGTGGAGCTTTCATCCAGTGTTGTCACC
GGAGATGTCTCGGTCGAGGAGGGCACAGCCAGAAACAAGCGAAGACACCG
CGCTCCGACACCGGCCGCTCCGGCGAACTCTGATGCCTTCTCATTGGGCA
AGAGCAGCAACAGTCGGAGGAGCGGCAAGCGAACCCGTCGAACCGCCGAG
GACGACGTGGTTGTCCTGGAGCACAACGACCAAACGGCGGCGACTGGTTC
TGCAGCCAGCGAGACGGGCAACGCGAGGCCGGGTTCAAGTGTCGCAGTCA
AGGCTGAGCACTAG back to top
|