prot_L-elsbetiae_contig72.16039.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig72.16039.1
Unique Nameprot_L-elsbetiae_contig72.16039.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length435
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig72.16039.1 vs. uniprot
Match: D7FTY6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY6_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 1.220e-126
Identity = 231/295 (78.31%), Postives = 262/295 (88.81%), Query Frame = 0 
Query:  136 MASLHGVIETKDDAVQRLRRESDRLHREIKRLHVEGEEHKGQENAMIVAATQNSRLLKLLEQEELKREEVLSERDEALAQVTELKHRVRTSDERHAKRTSGLEVKLIKAIGENLTLREKCSGTDKRIQTLENELECCRKQALFDKETAQAALSTLRQSQYEALSQLQESRDELQRTKDQAETNGEELEVCRQQSAELEMRLQT--ADLGSVERALSQREAAADEDSSIAQARLSKELSLSESLHNKVASMSRTILRLVERHKELQAEVGKRKAEEARLKDQIDQAGQRELQLQQK 428
            M SLHGVIETKD+AVQ+ +RESDRL REIKRLHVE EE +GQENAMIVAATQNSRLLKLLEQEELKRE VL+ERDEALA+V+ELKHRVRTSDE+HAKRTSGLEVKLIKAIGENL L+EK S TD++I+TL  ELE  RKQA FDKETA+ ALSTLRQSQY  +S+LQESRDELQR KDQAET G+EL VCRQQ+AELEMRL T  +DL S+ER  S+REAAADEDS +AQARL KE+SLSESLHNKVASMSRTILRLVERHK+L+A+V K +AEEARL DQI++A +RE++ QQK
Sbjct:    1 MGSLHGVIETKDNAVQKHKRESDRLRREIKRLHVEREERQGQENAMIVAATQNSRLLKLLEQEELKRESVLTERDEALAEVSELKHRVRTSDEQHAKRTSGLEVKLIKAIGENLALKEKYSSTDEKIETLTKELESARKQAKFDKETAETALSTLRQSQYRVISELQESRDELQRYKDQAETKGDELAVCRQQNAELEMRLGTLQSDLNSMERTSSEREAAADEDSRLAQARLEKEISLSESLHNKVASMSRTILRLVERHKDLKAQVVKHEAEEARLGDQIEEARKREVRFQQK 295
[Close]
BLAST of mRNA_L-elsbetiae_contig72.16039.1 vs. uniprot
Match: A0A835Z915_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z915_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.190e-20
Identity = 68/165 (41.21%), Postives = 109/165 (66.06%), Query Frame = 0 
Query:   93 TKEETLHLIKLRDEMISAKHQEVLLLSRQNQGLREGIDAVEKEMASLHGVIETKDDAVQRLRRESDRLHREIKRLHVEGEEHKGQENAMIVAATQNSRLLKLLEQEELKREEVLSERDEALAQVTELKHRVRTSDERHAKRTSGLEVKLIKAIGENLTLREKCSG 257
            +K + L L+++RD M+ AK +EV L++ QN  LR+  +A E EMA+L   ++ K+ A+   R+ S+R  R +KRL  E E + G+E A+ ++A Q++RLLKLLEQEE+KRE +L E+D A+++V ELK RV    + HA++   L+++L KA+ +     E  +G
Sbjct:   35 SKVQLLRLLRVRDGMLEAKQKEVSLVAHQNGLLRDQTNAAEAEMAALQLTLKEKEQALSAERKVSERAGRAVKRLQNEMEHYLGREQAIHMSAAQSTRLLKLLEQEEIKREHLLREKDAAVSEVGELKARVAALTKTHAEQEVDLQLRLAKALRDLAATNEHHAG 199
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig72.16039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTY6_ECTSI1.220e-12678.31Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z915_9STRA2.190e-2041.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 188..222
NoneNo IPR availableCOILSCoilCoilcoord: 291..325
NoneNo IPR availableCOILSCoilCoilcoord: 143..170
NoneNo IPR availableCOILSCoilCoilcoord: 380..414
NoneNo IPR availableCOILSCoilCoilcoord: 255..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig72contigL-elsbetiae_contig72:49760..54866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig72.16039.1mRNA_L-elsbetiae_contig72.16039.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig72 49760..54866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig72.16039.1 ID=prot_L-elsbetiae_contig72.16039.1|Name=mRNA_L-elsbetiae_contig72.16039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=435bp
GSGDEEESIEGSVESMTDESASTLRAPDSDSSSIATRYSAAGRADSVAST
SPSVRSKGARSLTTKSESKGGGTRKAKTKRGRKASSIDPASRTKEETLHL
IKLRDEMISAKHQEVLLLSRQNQGLREGIDAVEKEMASLHGVIETKDDAV
QRLRRESDRLHREIKRLHVEGEEHKGQENAMIVAATQNSRLLKLLEQEEL
KREEVLSERDEALAQVTELKHRVRTSDERHAKRTSGLEVKLIKAIGENLT
LREKCSGTDKRIQTLENELECCRKQALFDKETAQAALSTLRQSQYEALSQ
LQESRDELQRTKDQAETNGEELEVCRQQSAELEMRLQTADLGSVERALSQ
REAAADEDSSIAQARLSKELSLSESLHNKVASMSRTILRLVERHKELQAE
VGKRKAEEARLKDQIDQAGQRELQLQQKASNQHD*
back to top