prot_L-elsbetiae_contig6926.15697.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6926.15697.1
Unique Nameprot_L-elsbetiae_contig6926.15697.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length123
Homology
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BLAST of mRNA_L-elsbetiae_contig6926.15697.1 vs. uniprot
Match: A0A6H5JCK4_9PHAE (Telo_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK4_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.580e-34
Identity = 74/109 (67.89%), Postives = 83/109 (76.15%), Query Frame = 0 
Query:   15 PGGGPVSSLGVVRSTTAPHVFDTRTRIVSHWPPKVKDFVRRGP-GWADEPCFLFTLKLEDDSGVVEAVAAGPGASRLLPGCPSPAEFLASPDVQSRVERALAGLESAGA 122
            P G  +S+L VVRST AP+VFDTR RIVSHWPPKV+DFVRRGP    D   FLFTL+LEDD GVV+A+A+GP AS LLPG PSP EF  S +VQSRVER L  LES  A
Sbjct:  823 PEGRRMSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVRRGPESDNDRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPTEFYTSLEVQSRVERVLTRLESTSA 931
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BLAST of mRNA_L-elsbetiae_contig6926.15697.1 vs. uniprot
Match: D7FIQ5_ECTSI (POT1 protection of telomeres 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ5_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.960e-16
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 0 
Query:   48 KVKDFVRRGPGWADEPC-FLFTLKLEDDSGVVEAVAAGPGASRLLPGCPSPAEFLASPDVQSRVERALAGLES 119
            +V+DFVR GP   +    FLFTL+LEDD GVV+A+A+GP AS LLPG PSPAEF  S +V+SRVER L  LES
Sbjct:  538 EVEDFVRHGPESDNYRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPAEFYTSLEVRSRVERVLTRLES 610
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6926.15697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCK4_9PHAE2.580e-3467.89Telo_bind domain-containing protein n=1 Tax=Ectoca... [more]
D7FIQ5_ECTSI3.960e-1663.01POT1 protection of telomeres 1 homolog n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6926contigL-elsbetiae_contig6926:3732..4661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6926.15697.1mRNA_L-elsbetiae_contig6926.15697.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6926 3732..4661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6926.15697.1 ID=prot_L-elsbetiae_contig6926.15697.1|Name=mRNA_L-elsbetiae_contig6926.15697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=123bp
RRGAAAEGGRGSAGPGGGPVSSLGVVRSTTAPHVFDTRTRIVSHWPPKVK
DFVRRGPGWADEPCFLFTLKLEDDSGVVEAVAAGPGASRLLPGCPSPAEF
LASPDVQSRVERALAGLESAGAD
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