prot_L-elsbetiae_contig68.15560.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig68.15560.1
Unique Nameprot_L-elsbetiae_contig68.15560.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 2.820e-77
Identity = 144/202 (71.29%), Postives = 157/202 (77.72%), Query Frame = 0
Query:    7 ESAERQAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGS-PGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEG-GLGG-VGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQVSGTAV 205
            E A RQAFAVGVS+KAAP PF+RTKVV+LAPRYVIVNA  R I+VQQAG    VEPL V SG QAAFHWPQAG+  GWFG  AA G+KNRR+VLRFCG   GD               GWDWSGEILPEG G+ G VGRGVTTLR+RN +TREVAFVRVGTS+K SSV LV RNELPSF+PYRIDNF+ ETLTLRQV GTAV
Sbjct: 4126 EDAARQAFAVGVSIKAAPAPFDRTKVVALAPRYVIVNATGRSIQVQQAGSPAGVEPLTVGSGGQAAFHWPQAGAGSGWFGGTAAVGAKNRRMVLRFCGGGSGD------------GEGGWDWSGEILPEGAGVAGCVGRGVTTLRVRNRVTREVAFVRVGTSLKRSSVHLVFRNELPSFSPYRIDNFTHETLTLRQVGGTAV 4315          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 7.380e-75
Identity = 141/200 (70.50%), Postives = 153/200 (76.50%), Query Frame = 0
Query:    9 AERQAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGS-PGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEG-GLGG-VGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQVSGTAV 205
            A RQAFAVGVS+KAAP PF RTKVV+LAPRYVIVNA  R I+VQQAG    VEPL V SG QA FHWP+AG+  GWFG  AA G+KNRR+VLRFCG      G              WDWSGEILPEG G+GG VGRGVTTLR+RN +TREVAFVRVGTS+K SSV LV RNELPSFAPYRIDNF+ ETLTLRQV GTAV
Sbjct: 3549 AARQAFAVGVSIKAAPAPFHRTKVVALAPRYVIVNATGRSIQVQQAGSPAGVEPLTVGSGGQAEFHWPRAGAGSGWFGGTAAVGAKNRRMVLRFCGGSGDGEGS-------------WDWSGEILPEGAGVGGGVGRGVTTLRVRNRVTREVAFVRVGTSLKRSSVHLVFRNELPSFAPYRIDNFTHETLTLRQVGGTAV 3735          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A0P1ADS7_PLAHL (Vacuolar protein sorting-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADS7_PLAHL)

HSP 1 Score: 72.4 bits (176), Expect = 3.250e-11
Identity = 58/199 (29.15%), Postives = 87/199 (43.72%), Query Frame = 0
Query:   14 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAG--SPGWFGAPAAAGS-----------KNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            F +G S+  A   F RTKV+ L PR+V+VN M   +EV  +   V++  +   +   A    P +G  SP +      +G+           K R +  RF                      GW WSG +        V  G   +R+R+G TRE  FVR+   +   S+ +  R E  +  PYR++N+SLETL + Q
Sbjct: 3245 FCIGYSILPAKGQFSRTKVIMLTPRFVLVNTMSSAVEVCHSSPKVNLPEINATT---ANGSIPGSGELSPLYHIVHLESGAFADFHWSLRYAKTRTIRCRFA-------------------KYGWSWSGAVPL------VESGEYAIRMRHGSTRESKFVRITLKLDTPSICVYFREESTTTPPYRVENYSLETLRMHQ 3415          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A3M6VM54_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM54_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.430e-11
Identity = 60/209 (28.71%), Postives = 84/209 (40.19%), Query Frame = 0
Query:   14 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEV-------------QQAGLSVDVEPLKVCS----------GAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            F++G S++ A   + RTKV++L PR++++NAM   IEV               A  S  V   +  S          GA A FHW                +K R +  RF                      GW WSG +        V  G   +R+R+  TRE   VRV   +  S V +  R E  +  PYR++N+SLETL   Q
Sbjct:   41 FSIGYSIRPAKGQYSRTKVITLTPRFMLINAMSSAIEVCHSSSKMMTPAVINMANTSGSVANSRTTSPVNPVVQLDAGAYADFHW------------TLRFAKTRTIRCRFA-------------------EFGWSWSGAVPL------VESGEYAVRMRHESTRESKLVRVTLKLDSSCVCVYFREERTTAPPYRVENYSLETLRTHQ 212          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A484E2A5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2A5_BRELC)

HSP 1 Score: 68.2 bits (165), Expect = 9.190e-10
Identity = 58/197 (29.44%), Postives = 81/197 (41.12%), Query Frame = 0
Query:   14 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAG-----------SKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            + +G S+  A   + RTKV+ L PR+++VN M   +EV  +   V          A +A   P+A S         AG           SK R++  RF                      GW WSG +        V  G   +RLR+  TRE   VRV   +   SV +  R E  +  PYR++N+SLETL   Q
Sbjct: 3301 YCIGYSITPASGQYSRTKVIMLTPRFILVNTMTYAVEVCHSSSKVMAPIKNDILHANSAMPDPRAMSSVNSVVHLEAGGFADFHWTLQFSKTRKMRCRFT-------------------EIGWSWSGAVPL------VDSGEYVVRLRHETTRESRLVRVILKLDSPSVCVYFREERMAMPPYRVENYSLETLRTHQ 3472          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: K3WU58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU58_GLOUD)

HSP 1 Score: 67.0 bits (162), Expect = 2.280e-9
Identity = 59/201 (29.35%), Postives = 88/201 (43.78%), Query Frame = 0
Query:   14 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQA--------------GLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEI-LPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            +++G S+ AA   + RTKVV L PR++++N +D  IEV  +              G SV +    + S   +  H  +AG+   F      G K R +  R                       GW WSG + L E G          +R+R+  TRE   +R+   + GS V +  R E  S  PYR++N+SLETL + Q
Sbjct: 3335 YSIGYSISAAKGRYSRTKVVMLTPRFMLINTLDCAIEVCHSSAKFSGTTTSAIDIGSSVHLPNNGMMSSMNSVVHL-EAGAYADFHWTLRFG-KTRAIRCRLA-------------------EYGWSWSGAVPLGESG-------EYAVRMRHESTRESKLLRLTLKLDGSCVCVYFREESASAPPYRVENYSLETLRIHQ 3507          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A3R7MVF3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MVF3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.770e-9
Identity = 54/188 (28.72%), Postives = 82/188 (43.62%), Query Frame = 0
Query:   14 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGS-KNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEI-LPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            ++VG S+  A   + RTKV+ L PR++++N M   IEV  +   +    +   +GA  +    +  SP        AG+  +    LRF                      GW WSG + L E G          +R+R+  TRE   VRV   +  S + +  R E  +  PYR++N+SLETL   Q
Sbjct:  175 YSVGYSITPAKGQYSRTKVIMLTPRFMLINTMSSAIEVCHSSAKIMTPSVIDMTGAAGSMPNSRVMSPVNPVVQLDAGAFADFHWTLRFAKTRT---------IRCRFTEYGWSWSGAVPLGESG-------EYAVRMRHESTRESKLVRVALKLDSSCLCVYFREERTTAPPYRVENYSLETLRTHQ 346          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A8K1FIE1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIE1_PYTOL)

HSP 1 Score: 66.2 bits (160), Expect = 4.180e-9
Identity = 57/201 (28.36%), Postives = 86/201 (42.79%), Query Frame = 0
Query:   12 QAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEV-----------QQAGLSVDVEP-LKVCSGAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEI-LPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            + +++G S+ AA   + RTKV+ LAPR++IVN ++  +E+           Q  G+   + P L + +G  A FHW             +   K + +  R    E G                   WSG + L E G          +R+RN  TR    VRV   V    + + LR E  S  PYR++N+SLET  + Q
Sbjct: 3120 RVYSIGFSITAAKGRYSRTKVIMLAPRFMIVNTLESAVEICHSPASSGVDEQGGGVLTALNPSLHLEAGGYADFHW------------TSQFLKFKTIRCRMA--EHGSA-----------------WSGAVPLSESG-------EYVIRMRNETTRSTKMVRVVLKVDTPCICVYLREESTSVPPYRVENYSLETFRVHQ 3282          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A5D6Y466_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y466_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.180e-9
Identity = 57/189 (30.16%), Postives = 82/189 (43.39%), Query Frame = 0
Query:   14 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPA---AAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            ++VG S+ AA   + RTKVV L PR+++VN +   IEV  +                ++ H P  G      +     A    +    LRF G     R              GW WSG + P G       G   +R+R+  TRE   +R+   + GS V +  R E  S  PYR++N+SLETL + Q
Sbjct: 3270 YSVGYSISAAKGRYSRTKVVMLTPRFMLVNTLGCAIEVCHSSAKFSTTTAAAID-IGSSVHLPNNGMMSSMNSVVRLDAGAYADFHWTLRF-GKTRAIR--------CRIAEFGWSWSGAV-PLGD-----SGEYAVRMRHESTRESKLLRLTLKLDGSCVCVYFREESASAPPYRVENYSLETLRIHQ 3442          
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: M4BNJ9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNJ9_HYAAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-8
Identity = 58/189 (30.69%), Postives = 82/189 (43.39%), Query Frame = 0
Query:   12 QAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGS-KNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 199
            Q F++G SV  A   + RTK++ L PR++++N MD  IEV  +  S  + P  +   A A     +  S         AG+  N    LRF                      GW WSG +        V  G   +R+R+   RE   VRV   +  S V +  R EL +  P+RI+N+SLETL   Q
Sbjct: 1157 QKFSIGYSVCQAEGQYSRTKIIMLTPRFMLINTMDSAIEVCHSS-SKTMTPTMI-GVANANGPTSRLASSVTPVVQLDAGTYANFHWTLRFAKTRT---------IRCRFVDCGWSWSGAVPL------VESGEYAVRMRHESLRESKLVRVTLKLDSSCVCVYFREELTTAPPFRIENYSLETLRTHQ 1328          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP20_ECTSI2.820e-7771.29Vacuolar protein sorting-associated protein, putat... [more]
A0A6H5JKL9_9PHAE7.380e-7570.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1ADS7_PLAHL3.250e-1129.15Vacuolar protein sorting-associated protein n=1 Ta... [more]
A0A3M6VM54_9STRA5.430e-1128.71Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A484E2A5_BRELC9.190e-1029.44Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
K3WU58_GLOUD2.280e-929.35Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7MVF3_9STRA3.770e-928.72Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A8K1FIE1_PYTOL4.180e-928.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y466_9STRA4.180e-930.16Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
M4BNJ9_HYAAE1.350e-830.69Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009543Vacuolar protein sorting-associated protein 13, SHR-binding domainPFAMPF06650SHR-BDcoord: 10..78
e-value: 6.6E-10
score: 38.8
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 10..203
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 10..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig68contigL-elsbetiae_contig68:62493..64212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig68.15560.1mRNA_L-elsbetiae_contig68.15560.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig68 62493..64212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig68.15560.1 ID=prot_L-elsbetiae_contig68.15560.1|Name=mRNA_L-elsbetiae_contig68.15560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
RRRRRRESAERQAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIE
VQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLR
FCGNEDGDRGHGGGDGDGEKEETGWDWSGEILPEGGLGGVGRGVTTLRLR
NGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQV
SGTAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009543SHR-BD
IPR026847VPS13