mRNA_L-elsbetiae_contig68.15560.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI) HSP 1 Score: 262 bits (669), Expect = 2.820e-77 Identity = 144/202 (71.29%), Postives = 157/202 (77.72%), Query Frame = 1 Query: 19 ESAERQAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGS-PGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEG-GLGG-VGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQVSGTAV 615 E A RQAFAVGVS+KAAP PF+RTKVV+LAPRYVIVNA R I+VQQAG VEPL V SG QAAFHWPQAG+ GWFG AA G+KNRR+VLRFCG GD GWDWSGEILPEG G+ G VGRGVTTLR+RN +TREVAFVRVGTS+K SSV LV RNELPSF+PYRIDNF+ ETLTLRQV GTAV Sbjct: 4126 EDAARQAFAVGVSIKAAPAPFDRTKVVALAPRYVIVNATGRSIQVQQAGSPAGVEPLTVGSGGQAAFHWPQAGAGSGWFGGTAAVGAKNRRMVLRFCGGGSGD------------GEGGWDWSGEILPEGAGVAGCVGRGVTTLRVRNRVTREVAFVRVGTSLKRSSVHLVFRNELPSFSPYRIDNFTHETLTLRQVGGTAV 4315
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE) HSP 1 Score: 255 bits (651), Expect = 7.380e-75 Identity = 141/200 (70.50%), Postives = 153/200 (76.50%), Query Frame = 1 Query: 25 AERQAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGS-PGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEG-GLGG-VGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQVSGTAV 615 A RQAFAVGVS+KAAP PF RTKVV+LAPRYVIVNA R I+VQQAG VEPL V SG QA FHWP+AG+ GWFG AA G+KNRR+VLRFCG G WDWSGEILPEG G+GG VGRGVTTLR+RN +TREVAFVRVGTS+K SSV LV RNELPSFAPYRIDNF+ ETLTLRQV GTAV Sbjct: 3549 AARQAFAVGVSIKAAPAPFHRTKVVALAPRYVIVNATGRSIQVQQAGSPAGVEPLTVGSGGQAEFHWPRAGAGSGWFGGTAAVGAKNRRMVLRFCGGSGDGEGS-------------WDWSGEILPEGAGVGGGVGRGVTTLRVRNRVTREVAFVRVGTSLKRSSVHLVFRNELPSFAPYRIDNFTHETLTLRQVGGTAV 3735
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A0P1ADS7_PLAHL (Vacuolar protein sorting-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADS7_PLAHL) HSP 1 Score: 72.4 bits (176), Expect = 3.250e-11 Identity = 58/199 (29.15%), Postives = 87/199 (43.72%), Query Frame = 1 Query: 40 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAG--SPGWFGAPAAAGS-----------KNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 F +G S+ A F RTKV+ L PR+V+VN M +EV + V++ + + A P +G SP + +G+ K R + RF GW WSG + V G +R+R+G TRE FVR+ + S+ + R E + PYR++N+SLETL + Q Sbjct: 3245 FCIGYSILPAKGQFSRTKVIMLTPRFVLVNTMSSAVEVCHSSPKVNLPEINATT---ANGSIPGSGELSPLYHIVHLESGAFADFHWSLRYAKTRTIRCRFA-------------------KYGWSWSGAVPL------VESGEYAIRMRHGSTRESKFVRITLKLDTPSICVYFREESTTTPPYRVENYSLETLRMHQ 3415
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A3M6VM54_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM54_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.430e-11 Identity = 60/209 (28.71%), Postives = 84/209 (40.19%), Query Frame = 1 Query: 40 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEV-------------QQAGLSVDVEPLKVCS----------GAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 F++G S++ A + RTKV++L PR++++NAM IEV A S V + S GA A FHW +K R + RF GW WSG + V G +R+R+ TRE VRV + S V + R E + PYR++N+SLETL Q Sbjct: 41 FSIGYSIRPAKGQYSRTKVITLTPRFMLINAMSSAIEVCHSSSKMMTPAVINMANTSGSVANSRTTSPVNPVVQLDAGAYADFHW------------TLRFAKTRTIRCRFA-------------------EFGWSWSGAVPL------VESGEYAVRMRHESTRESKLVRVTLKLDSSCVCVYFREERTTAPPYRVENYSLETLRTHQ 212
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A484E2A5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2A5_BRELC) HSP 1 Score: 68.2 bits (165), Expect = 9.190e-10 Identity = 58/197 (29.44%), Postives = 81/197 (41.12%), Query Frame = 1 Query: 40 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAG-----------SKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 + +G S+ A + RTKV+ L PR+++VN M +EV + V A +A P+A S AG SK R++ RF GW WSG + V G +RLR+ TRE VRV + SV + R E + PYR++N+SLETL Q Sbjct: 3301 YCIGYSITPASGQYSRTKVIMLTPRFILVNTMTYAVEVCHSSSKVMAPIKNDILHANSAMPDPRAMSSVNSVVHLEAGGFADFHWTLQFSKTRKMRCRFT-------------------EIGWSWSGAVPL------VDSGEYVVRLRHETTRESRLVRVILKLDSPSVCVYFREERMAMPPYRVENYSLETLRTHQ 3472
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: K3WU58_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU58_GLOUD) HSP 1 Score: 67.0 bits (162), Expect = 2.280e-9 Identity = 59/201 (29.35%), Postives = 88/201 (43.78%), Query Frame = 1 Query: 40 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQA--------------GLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEI-LPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 +++G S+ AA + RTKVV L PR++++N +D IEV + G SV + + S + H +AG+ F G K R + R GW WSG + L E G +R+R+ TRE +R+ + GS V + R E S PYR++N+SLETL + Q Sbjct: 3335 YSIGYSISAAKGRYSRTKVVMLTPRFMLINTLDCAIEVCHSSAKFSGTTTSAIDIGSSVHLPNNGMMSSMNSVVHL-EAGAYADFHWTLRFG-KTRAIRCRLA-------------------EYGWSWSGAVPLGESG-------EYAVRMRHESTRESKLLRLTLKLDGSCVCVYFREESASAPPYRVENYSLETLRIHQ 3507
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A3R7MVF3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MVF3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.770e-9 Identity = 54/188 (28.72%), Postives = 82/188 (43.62%), Query Frame = 1 Query: 40 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGS-KNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEI-LPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 ++VG S+ A + RTKV+ L PR++++N M IEV + + + +GA + + SP AG+ + LRF GW WSG + L E G +R+R+ TRE VRV + S + + R E + PYR++N+SLETL Q Sbjct: 175 YSVGYSITPAKGQYSRTKVIMLTPRFMLINTMSSAIEVCHSSAKIMTPSVIDMTGAAGSMPNSRVMSPVNPVVQLDAGAFADFHWTLRFAKTRT---------IRCRFTEYGWSWSGAVPLGESG-------EYAVRMRHESTRESKLVRVALKLDSSCLCVYFREERTTAPPYRVENYSLETLRTHQ 346
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A8K1FIE1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIE1_PYTOL) HSP 1 Score: 66.2 bits (160), Expect = 4.180e-9 Identity = 57/201 (28.36%), Postives = 86/201 (42.79%), Query Frame = 1 Query: 34 QAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEV-----------QQAGLSVDVEP-LKVCSGAQAAFHWPQAGSPGWFGAPAAAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEI-LPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 + +++G S+ AA + RTKV+ LAPR++IVN ++ +E+ Q G+ + P L + +G A FHW + K + + R E G WSG + L E G +R+RN TR VRV V + + LR E S PYR++N+SLET + Q Sbjct: 3120 RVYSIGFSITAAKGRYSRTKVIMLAPRFMIVNTLESAVEICHSPASSGVDEQGGGVLTALNPSLHLEAGGYADFHW------------TSQFLKFKTIRCRMA--EHGSA-----------------WSGAVPLSESG-------EYVIRMRNETTRSTKMVRVVLKVDTPCICVYLREESTSVPPYRVENYSLETFRVHQ 3282
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: A0A5D6Y466_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y466_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.180e-9 Identity = 57/189 (30.16%), Postives = 82/189 (43.39%), Query Frame = 1 Query: 40 FAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPA---AAGSKNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 ++VG S+ AA + RTKVV L PR+++VN + IEV + ++ H P G + A + LRF G R GW WSG + P G G +R+R+ TRE +R+ + GS V + R E S PYR++N+SLETL + Q Sbjct: 3270 YSVGYSISAAKGRYSRTKVVMLTPRFMLVNTLGCAIEVCHSSAKFSTTTAAAID-IGSSVHLPNNGMMSSMNSVVRLDAGAYADFHWTLRF-GKTRAIR--------CRIAEFGWSWSGAV-PLGD-----SGEYAVRMRHESTRESKLLRLTLKLDGSCVCVYFREESASAPPYRVENYSLETLRIHQ 3442
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Match: M4BNJ9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNJ9_HYAAE) HSP 1 Score: 64.7 bits (156), Expect = 1.350e-8 Identity = 58/189 (30.69%), Postives = 82/189 (43.39%), Query Frame = 1 Query: 34 QAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEVQQAGLSVDVEPLKVCSGAQAAFHWPQAGSPGWFGAPAAAGS-KNRRLVLRFCGNEDGDRGHXXXXXXXXXXXTGWDWSGEILPEGGLGGVGRGVTTLRLRNGLTREVAFVRVGTSVKGSSVRLVLRNELPSFAPYRIDNFSLETLTLRQ 597 Q F++G SV A + RTK++ L PR++++N MD IEV + S + P + A A + S AG+ N LRF GW WSG + V G +R+R+ RE VRV + S V + R EL + P+RI+N+SLETL Q Sbjct: 1157 QKFSIGYSVCQAEGQYSRTKIIMLTPRFMLINTMDSAIEVCHSS-SKTMTPTMI-GVANANGPTSRLASSVTPVVQLDAGTYANFHWTLRFAKTRT---------IRCRFVDCGWSWSGAVPL------VESGEYAVRMRHESLRESKLVRVTLKLDSSCVCVYFREELTTAPPFRIENYSLETLRTHQ 1328 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig68.15560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig68.15560.1 >prot_L-elsbetiae_contig68.15560.1 ID=prot_L-elsbetiae_contig68.15560.1|Name=mRNA_L-elsbetiae_contig68.15560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp RRRRRRESAERQAFAVGVSVKAAPPPFERTKVVSLAPRYVIVNAMDRGIEback to top mRNA from alignment at L-elsbetiae_contig68:62493..64212+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig68.15560.1 ID=mRNA_L-elsbetiae_contig68.15560.1|Name=mRNA_L-elsbetiae_contig68.15560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1720bp|location=Sequence derived from alignment at L-elsbetiae_contig68:62493..64212+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig68:62493..64212+ >mRNA_L-elsbetiae_contig68.15560.1 ID=mRNA_L-elsbetiae_contig68.15560.1|Name=mRNA_L-elsbetiae_contig68.15560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1236bp|location=Sequence derived from alignment at L-elsbetiae_contig68:62493..64212+ (Laminarionema elsbetiae ELsaHSoW15)back to top |