prot_L-elsbetiae_contig6713.15455.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6713.15455.1
Unique Nameprot_L-elsbetiae_contig6713.15455.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length118
Homology
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BLAST of mRNA_L-elsbetiae_contig6713.15455.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 9.610e-14
Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:    7 KNGLLSCLEAVLEACPRSGSGSAAAGAALAALRKSMAACERSAKRPPPDAQAHALARAALATWLS 71
            K GLLSCL AVLE     GS S AA  AL ALR SM+ACER  KRPPPDAQ HALARAALA WLS
Sbjct: 1933 KKGLLSCLRAVLEVSR--GSESLAAAGALRALRTSMSACERLGKRPPPDAQTHALARAALAAWLS 1995
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BLAST of mRNA_L-elsbetiae_contig6713.15455.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.770e-13
Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:    7 KNGLLSCLEAVLEACPRSGSGSAAAGAALAALRKSMAACERSAKRPPPDAQAHALARAALATWLSP 72
            K G LSCL AVLE     GS + AA  AL ALR SM+ACE+  KRPPPDAQAHALARAALA WLSP
Sbjct: 1494 KKGFLSCLRAVLEISR--GSENLAAAGALRALRTSMSACEQLGKRPPPDAQAHALARAALAAWLSP 1557
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6713.15455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K182_9PHAE9.610e-1472.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8A9_ECTSI1.770e-1369.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6713contigL-elsbetiae_contig6713:5663..6673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6713.15455.1mRNA_L-elsbetiae_contig6713.15455.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6713 5661..6673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6713.15455.1 ID=prot_L-elsbetiae_contig6713.15455.1|Name=mRNA_L-elsbetiae_contig6713.15455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp
AERRERKNGLLSCLEAVLEACPRSGSGSAAAGAALAALRKSMAACERSAK
RPPPDAQAHALARAALATWLSPSSGDSASSNGPAVAATPSGSSCPSSPSA
MLPPDSPFHQKKRSHQPP
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