prot_L-elsbetiae_contig671.15451.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig671.15451.1
Unique Nameprot_L-elsbetiae_contig671.15451.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1185
Homology
BLAST of mRNA_L-elsbetiae_contig671.15451.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 1.550e-127
Identity = 485/986 (49.19%), Postives = 559/986 (56.69%), Query Frame = 0
Query:   50 ALRGRCEELEGEAAAAAEKIAVLEXXXXXXXXXXXXXXXXXXEDTAAEQVASEEEGEXXXXXQAAEGVPAATSTGEAVVATAVEEGEEDGGVQGSRLQQQEVLETRLQEAQSSAEESKQAAREMEAVVAGLREEQGTLNARVLELTAEVAAAAGASSALQETLNNVTKEKEDTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAESLRRDKVGGDIVRCGVEPAAASACIAFVEPDMLLFRSRQALGRSSPITESSDGSR----EQASLQSHLQEAAAEATRSQQALAQHLASSEEKKNGDETEASXXXXXXXXXXXXXXEQMASQKDKLRKAAARLRSLKEERDTATEKLASTSSLLENSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEETLRLSQGSDARVVTLEADLKAERARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETTKTRLKDLFAKYKAVQAKHGAAQDEVEALKLEAGKVSGLEAGRTELQSKVEGLDSKLAAADAALKEKEEEFARTASEKEQAAKVEKSAKEDLEVKVKRLKTMLAKLQKSRDLKDADIAALKAPPPPPKAFTVVLRVKHDGSTWCLLR-TPQAASSGDAGK----ADGAAAPGGGSQDAGLKQQWVTEDKARAWIAGGSSDSDAALWAPVVQDAFEERAIAAAAEARVSAAGALSTRQELEALSSEFSKYKARAHTALKKATSSGADDKRKDELIAALQSEQARLTALLEETTSSLERQLSDERGMSKGREDDLEA---VSERLETAQEQVRELQGSLRDQERRVAQLQEAEDGHSEEMSALREARDELKSHLKAAKAQAYESSSIAQRLQEELEELSKAKARDSGSRRGSGNWDTHGDGGWAGQQIL 1023
            ALR RC ELE  AA A+EKIA LE                    TA +  A+ EE       Q  +G  AAT   EA +     E   D   + S  Q+ E+LE RL+EA+   E SK+AARE E VVAGLREEQ  LN+RVLELTAEVA A  A S+ Q++L    +E+ED                                               LR+ +V  +      + AA               R R  L +     E+ +  R    E+ASL+  L             L   ++ S   + G    A+              EQ+A QKDKL+KAAARLRSLKEERD ATEK+AST++LLE SEK                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                     EE  +  + S AR   LEADL AER+     XXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXX ++KTRLKDLFAKYKAVQ                                                 E+E+EFA+   EKEQ A  EKSAKEDLEVKVKRLK++L+KLQKS   KDAD+AALKAP PPPKAFTV LRV+H+GSTWC ++ T Q A+S D GK    A+ +AAP     D   KQQWVTEDKAR W+AGGSS SD ALW  VVQ+AFEERA+AAAAEARV+A GAL+TRQELEALS+EF+KYKARAHTALKKATS+GA+DKRKDELIAALQSE ARLT  +E                              S  LETAQEQVR LQGSLRDQER++AQLQEAE+GHSEEMSALREARDELKS LKAAKAQA ESS IAQRLQEELEE++K++  D     G+G+WD   DGGWAGQQ+L
Sbjct:  595 ALRTRCAELEIGAAVASEKIAALEARVRDADAVSPSS-------TAEDAAAAPEEASGGDRGQDEDGDAAATVV-EATMPGVTSEAATDTREEESGAQR-ELLEKRLREAE---EASKEAAREKEGVVAGLREEQAALNSRVLELTAEVATAREALSSSQKSLE---RERED----------------------------------------------GLRKARVLTERAEAAEQAAATXXXXXXXXXQE---RERDLLEQREKAAEAEEALRRLRQEKASLEGRLXXXXXXXXXXXXELTAAISGSTASQEG----AAEAVAKAEGERAALEEQVAGQKDKLKKAAARLRSLKEERDAATEKVASTAALLETSEKNLADAEARSRSLEEAIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATCRLREAEDLLRSTSEESMVLRRGL----------EERCQRLEESAARAPALEADLAAERSGRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGALQGQVDAANXXXXXXXXXXXXXXXXXXSSKTRLKDLFAKYKAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREDEFAKMVGEKEQVAAAEKSAKEDLEVKVKRLKSLLSKLQKSSHSKDADLAALKAPAPPPKAFTVALRVRHEGSTWCFVKATQQPATSEDGGKDTAPAEASAAP---KPD---KQQWVTEDKARTWLAGGSSSSDVALWPKVVQEAFEERAVAAAAEARVAAEGALATRQELEALSTEFAKYKARAHTALKKATSNGAEDKRKDELIAALQSEVARLTKRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAELETAQEQVRGLQGSLRDQERKLAQLQEAEEGHSEEMSALREARDELKSQLKAAKAQANESSCIAQRLQEELEEVTKSRGNDDRRGNGNGSWDARADGGWAGQQLL 1496          
BLAST of mRNA_L-elsbetiae_contig671.15451.1 vs. uniprot
Match: D7FMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 4.110e-16
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 0
Query:  700 VKRLKTMLAKLQKSRDLKDADIAALKAPPPPPKAFTVVLRVKHDGSTWCLLRTPQ 754
            VKRLK++L+KLQKS   KDAD+AALKAP PPPKAFTV LRV+H+GSTWC ++  Q
Sbjct:    2 VKRLKSLLSKLQKSSHSKDADLAALKAPAPPPKAFTVALRVRHEGSTWCFVKATQ 56          
BLAST of mRNA_L-elsbetiae_contig671.15451.1 vs. uniprot
Match: D8LKN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN4_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.600e-10
Identity = 104/294 (35.37%), Postives = 127/294 (43.20%), Query Frame = 0
Query:  148 QQEVLETRLQEAQSSAEESKQAAREMEAVVAGLREEQGTLNARVLELTAEVAAAAGASSALQETLNNVTKEKEDTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAESLRRDKVGGDIVRCGVEPA----------AASACIAFVEPDMLLFRSRQALGRSSPITESSDGSR----------EQASLQSHLQEAAAEATRSQQALAQHLASSEEKKNGDETEASXXXXXXXXXXXXXXEQMASQKDKLRKAAARLRSLKEERDTATEKLASTSSLLENSEK 421
            Q E+L+ RL+E + +A+E    ARE E VVAGLREEQ  LN+RVLELTAEVAAA  A SA QE L    +E+ED L                                   XXXXXX       +                        AA A                                          E+ASL+  L+EAA E +R +Q L   ++ S   + G    A+              EQ+A QKDKL+KAAARLRSLKEERD ATEK+A TS+LLE SEK
Sbjct:  566 QLELLKKRLREVKEAAKEP---AREKEGVVAGLREEQAALNSRVLELTAEVAAAREALSASQECLE---REREDGLRQARQLTERAEAAEQAAEEAAAAGQERERDLEEQRXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXAAEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKASLEGRLEEAAEETSRLRQELTAAISGSTASQEG----AAEAVAKAEGERAALEEQVAGQKDKLKKAAARLRSLKEERDAATEKVAFTSALLETSEK 849          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig671.15451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KSR4_9PHAE1.550e-12749.19GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FMD5_ECTSI4.110e-1670.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKN4_ECTSI2.600e-1035.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..443
NoneNo IPR availableCOILSCoilCoilcoord: 528..562
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableCOILSCoilCoilcoord: 212..232
NoneNo IPR availableCOILSCoilCoilcoord: 693..713
NoneNo IPR availableCOILSCoilCoilcoord: 245..265
NoneNo IPR availableCOILSCoilCoilcoord: 982..1002
NoneNo IPR availableCOILSCoilCoilcoord: 869..889
NoneNo IPR availableCOILSCoilCoilcoord: 448..503
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableCOILSCoilCoilcoord: 149..183
NoneNo IPR availableCOILSCoilCoilcoord: 905..974
NoneNo IPR availableCOILSCoilCoilcoord: 654..688
NoneNo IPR availableCOILSCoilCoilcoord: 567..636
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 5..994
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1118..1139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1140..1150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1151..1171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1172..1184
NoneNo IPR availableTMHMMTMhelixcoord: 1149..1171
NoneNo IPR availableTMHMMTMhelixcoord: 1118..1140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig671contigL-elsbetiae_contig671:9513..29233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig671.15451.1mRNA_L-elsbetiae_contig671.15451.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig671 5156..29309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig671.15451.1 ID=prot_L-elsbetiae_contig671.15451.1|Name=mRNA_L-elsbetiae_contig671.15451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1185bp
MKTMKDEQQQQQQQQQQQQQQEEPPETAAPAPSAGNSGGPSSMEAEVEVA
LRGRCEELEGEAAAAAEKIAVLEEKLSSASTAAAAAAAAAGEDTAAEQVA
SEEEGEGEGEGQAAEGVPAATSTGEAVVATAVEEGEEDGGVQGSRLQQQE
VLETRLQEAQSSAEESKQAAREMEAVVAGLREEQGTLNARVLELTAEVAA
AAGASSALQETLNNVTKEKEDTLAQQARLLDERAGAAEEARLAARREAEE
QSTAAAEAAAAAEEAAESLRRDKVGGDIVRCGVEPAAASACIAFVEPDML
LFRSRQALGRSSPITESSDGSREQASLQSHLQEAAAEATRSQQALAQHLA
SSEEKKNGDETEASEAAAKAEEERSALGEQMASQKDKLRKAAARLRSLKE
ERDTATEKLASTSSLLENSEKNLADAEARCRALEEERESEKEAIAAGGRE
AEARASAAEEKLSTVEQDKSDLRQEVAALTSSLRDAGERADARESELDRL
ESDLGESCQRLGAAEETLRLSQGSDARVVTLEADLKAERARLGQLESELD
STRAGARQLESLKEGMARESEEIMGALQGQVDAANKERDVAVGSLEKAEQ
ERETTKTRLKDLFAKYKAVQAKHGAAQDEVEALKLEAGKVSGLEAGRTEL
QSKVEGLDSKLAAADAALKEKEEEFARTASEKEQAAKVEKSAKEDLEVKV
KRLKTMLAKLQKSRDLKDADIAALKAPPPPPKAFTVVLRVKHDGSTWCLL
RTPQAASSGDAGKADGAAAPGGGSQDAGLKQQWVTEDKARAWIAGGSSDS
DAALWAPVVQDAFEERAIAAAAEARVSAAGALSTRQELEALSSEFSKYKA
RAHTALKKATSSGADDKRKDELIAALQSEQARLTALLEETTSSLERQLSD
ERGMSKGREDDLEAVSERLETAQEQVRELQGSLRDQERRVAQLQEAEDGH
SEEMSALREARDELKSHLKAAKAQAYESSSIAQRLQEELEELSKAKARDS
GSRRGSGNWDTHGDGGWAGQQILATNGTHSSSEQGAGSALGLRSLPLPAA
DAGFGTSTGATGSAAASPSNGGGAGGGDFSGAGEAVSGSESVGRSGGGGG
GGGSVQLMAVAELERRCVLSVVDVGCVLCFGCTAAAWLSLSATRTFPSFP
VLPFGYFHFLFFVACSTNWLLHECPFETAVLKAA*
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