prot_L-elsbetiae_contig67.15438.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig67.15438.1
Unique Nameprot_L-elsbetiae_contig67.15438.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig67.15438.1 vs. uniprot
Match: D7FH12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH12_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.990e-30
Identity = 69/103 (66.99%), Postives = 76/103 (73.79%), Query Frame = 0 
Query:   13 RVGEGADAL-AQDQQRVADELNEKLDVLTTLTYPNSSISPQDAGFMVSALCEAVPWRSARLSARVAQLFVSLCAKQQKVAFLVWQLNIVLDFFVGSLAPTAGE 114
            R G G  A  A+ +Q    ELNE+L +L  LTYPNSSISPQDAGFM+SALCEAVP  S  LSARVAQLF  LCAKQQ+V+FL WQLNIVLD FV SL   A E
Sbjct:  118 RAGAGTAAFPARPEQLDGAELNEQLGILARLTYPNSSISPQDAGFMLSALCEAVPRSSRGLSARVAQLFELLCAKQQRVSFLAWQLNIVLDLFVASLPSAAAE 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig67.15438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH12_ECTSI1.990e-3066.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig67contigL-elsbetiae_contig67:13530..15456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig67.15438.1mRNA_L-elsbetiae_contig67.15438.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig67 13529..15456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig67.15438.1 ID=prot_L-elsbetiae_contig67.15438.1|Name=mRNA_L-elsbetiae_contig67.15438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
TAASVVGNNGDGRVGEGADALAQDQQRVADELNEKLDVLTTLTYPNSSIS
PQDAGFMVSALCEAVPWRSARLSARVAQLFVSLCAKQQKVAFLVWQLNIV
LDFFVGSLAPTAGEESPPPPQ
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