prot_L-elsbetiae_contig67.15437.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig67.15437.1
Unique Nameprot_L-elsbetiae_contig67.15437.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
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BLAST of mRNA_L-elsbetiae_contig67.15437.1 vs. uniprot
Match: A0A6H5K415_9PHAE (DUF4042 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K415_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.640e-45
Identity = 102/142 (71.83%), Postives = 114/142 (80.28%), Query Frame = 0 
Query:    3 SDRRDCARALAQLLYENGERLGTRFDDVLPPLLGLAAPSAVDLETKHAALDALANLSLKNWPGFTETQRQAVCSCLTQNFVAHWRAVSSFSSPPRIAALAXXXXXXXXXXXXXXXXXXXXERKVLASATRGLACAVGKSGVT 144
            S +RDC RALAQLLYENGERLGTRFDDV+PPLL LA PSA+DL+T+HAALDALANL LKNW GF E QRQ  CSCLT+NFVA+WRA +S S         XXXXXXXXXXXXX       ERK+LASATRGLACA+GK+GV+
Sbjct:   79 SFQRDCTRALAQLLYENGERLGTRFDDVVPPLLRLADPSAIDLDTRHAALDALANLCLKNWAGFAEPQRQMTCSCLTRNFVANWRAFASSSXXXXXXXXXXXXXXXXXXXXXXPG-----ERKILASATRGLACAIGKAGVS 215
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BLAST of mRNA_L-elsbetiae_contig67.15437.1 vs. uniprot
Match: D7FH12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH12_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 4.750e-39
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 0 
Query:    3 SDRRDCARALAQLLYENGERLGTRFDDVLPPLLGLAAPSAVDLETKHAALDALANLSLKNWPGFTETQRQAVCSCLTQNFVAHWRAV 89
            S +RDC RALAQLLYENGERLGTRFDDV+PPLL LA PSA+DL+T+HAALDALANL LKNW GF E QRQA+CSCLT+NFVAHW  V
Sbjct:  248 SGQRDCTRALAQLLYENGERLGTRFDDVVPPLLRLADPSAIDLDTRHAALDALANLCLKNWAGFAEQQRQAICSCLTRNFVAHWARV 334
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig67.15437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K415_9PHAE1.640e-4571.83DUF4042 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FH12_ECTSI4.750e-3980.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig67contigL-elsbetiae_contig67:12659..13463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig67.15437.1mRNA_L-elsbetiae_contig67.15437.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig67 12657..13463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig67.15437.1 ID=prot_L-elsbetiae_contig67.15437.1|Name=mRNA_L-elsbetiae_contig67.15437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
SPSDRRDCARALAQLLYENGERLGTRFDDVLPPLLGLAAPSAVDLETKHA
ALDALANLSLKNWPGFTETQRQAVCSCLTQNFVAHWRAVSSFSSPPRIAA
LASAAVSSSAATGGGGGGGGAAERKVLASATRGLACAVGKSGVTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold