prot_L-elsbetiae_contig6691.15427.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6691.15427.1
Unique Nameprot_L-elsbetiae_contig6691.15427.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length316
Homology
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 1.940e-194
Identity = 260/298 (87.25%), Postives = 278/298 (93.29%), Query Frame = 0
Query:   19 SELGIMFHDEDIVVLNKPQGLRTVPGKASGPEAETRAHVEWHSGTKRQRQEFWTDVVHNACDSLLRDEETEGEEEFRGHLRRLTRENNVPRKRSKFQNYTAVTLGLEGEEGDRVSARLWDAVDGQLKKEVGPGVDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPHVR 316
            S++ ++F D DIVVLNKP GLRTVPGKA GPEAETR HVEWHSGTKRQRQEFWTDVVH AC+SLL DE+TEGEEEFR HLRRLT+ENNVPRKRSKF NYTAVTLGLEGEEGD+VSARLWD VDG LKKEVGPGVDCLLTRV+SRWP+ARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAV+EG+MAKTPKSGE+ AK+RPD +NRPKQMFCEE GNEA T WERIKRK+DRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGT EG AKS+RLLLHAR+ISFPH R
Sbjct:   22 SDVDVIFSDPDIVVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGTAKSERLLLHARRISFPHPR 319          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: UPI0019D3727C (pseudouridine synthase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3727C)

HSP 1 Score: 156 bits (394), Expect = 7.550e-43
Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 0
Query:  153 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            DCL+TR++  +P A  VHRLD DTSG++++ LT E    + RQF++R   KTYTAVV G+ A+   SGEI   I  D +NRP+Q+ C E G +A T ++ ++R+ DR+ ++ +PVTGR+HQ+R+H   LGHP++G  +Y   E  A +DRL+LHA +I F H
Sbjct:   47 DCLITRLQRDYPSASIVHRLDLDTSGIMIIPLTRECHAHISRQFQQRRVEKTYTAVVWGEPARD--SGEIDLPIACDWDNRPRQLICHERGKQALTRYQVLERRGDRSRLELSPVTGRSHQLRIHMRELGHPILGCDMYAHPEALAMADRLMLHATRIGFEH 206          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A2E2KKK0_9GAMM (RNA pseudouridine synthase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E2KKK0_9GAMM)

HSP 1 Score: 155 bits (392), Expect = 9.690e-43
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 0
Query:  153 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            DCL  RV++ +P AR VHRLD  TSGL+V+ALT+EA R++ R F+ER   K Y A++ GK ++  K G +   +  D  NRP Q+   E G  A T W+        T V+ TP+TGR+HQ+R+H   +GHP++GD  Y  E+ KA SDRLLLHA ++SFPH
Sbjct:   32 DCLWRRVQAEFPTARVVHRLDYATSGLMVLALTLEAQRDISRSFQERKTGKLYQAIISGKPSE--KQGSVDLPLICDWENRPLQIVDHEHGKNALTHWKATGEDSRGTRVELTPITGRSHQLRVHMQAMGHPIIGDRFYADEDSKALSDRLLLHAERLSFPH 191          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A1Q8FZ42_9PROT (Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74317 RepID=A0A1Q8FZ42_9PROT)

HSP 1 Score: 155 bits (392), Expect = 1.590e-42
Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = 0
Query:  153 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            DCL  R ++ +P AR +HRLD DTSG++V+ALT  A   + +QF +R  SK+Y A V+G+M  T  SG +   +  D  NRP+QM C E G  A T WE +   D  + V   P+TGR+HQ+R+H +HLGHP++GD+LY   +  A SDRL LHAR++ F H
Sbjct:   49 DCLEARARADFPTARIIHRLDMDTSGVIVLALTAHAQAHIGKQFEKRQTSKSYIARVQGEM--TQSSGRVDQPLITDWPNRPRQMICHERGRRAVTDWEVLDIADGVSRVRLAPLTGRSHQLRVHMLHLGHPILGDNLYAPPDALAASDRLCLHARELGFRH 208          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A6P2AHX5_9BACT (RluA family pseudouridine synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6P2AHX5_9BACT)

HSP 1 Score: 154 bits (389), Expect = 3.050e-42
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 0
Query:  152 VDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDAN--NRPKQMFCEESGNEAKTLWERIKRKDD--RTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            +DCL TRV+ ++P+AR VHRLD+DTSG++VMA   EA RE+ RQF +R   K YTA+V G +     +G I   IR D +  N+P+Q+   E G  + T +  I+R DD  RT +D  P+TGR+HQ+R+H   +GHP++GD LY   E  A SDRLLLHAR++ F H
Sbjct:   31 LDCLATRVQRQYPEARIVHRLDRDTSGVIVMAFDAEAHRELSRQFHDREVEKRYTAIVAGHVQSD--TGRIDLPIRKDMDPANKPRQLIDHEHGRPSITDYTVIERLDDPQRTRLDLKPITGRSHQLRLHLKEIGHPILGDDLYAPPEVLALSDRLLLHARELWFVH 195          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A8A4TYK2_9BACT (Pseudouridine synthase n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TYK2_9BACT)

HSP 1 Score: 154 bits (389), Expect = 3.960e-42
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 0
Query:  153 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            D L +R +   P+AR VHRLD +TSG+ VMAL  ++ RE+ RQF +R   KTY A+  G M    + GE+   +  D  NRP+QM   E+G +A+T W  I R+ DRTWV  TP+TGR+HQ+R+H   +GHP++GD LY   E    + RLLLHA  +SF H
Sbjct:   45 DSLASRAQQLEPEARTVHRLDCETSGVTVMALDADSHRELSRQFHDREVLKTYVAICAGMMET--EQGEVNLPLVCDWPNRPRQMVDHENGKQAQTFWRVIHREPDRTWVQLTPITGRSHQLRVHLREIGHPILGDRLYAPPEVMRMAPRLLLHAEMLSFSH 204          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A2E5DZI3_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5DZI3_9BACT)

HSP 1 Score: 153 bits (386), Expect = 9.050e-42
Identity = 76/168 (45.24%), Postives = 109/168 (64.88%), Query Frame = 0
Query:  148 VGPG-VDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            +GP   DCL+ R ++ +P AR VHRLD+DTSGL+V+A   +  RE+ RQF++R   KTY A+  G +A     G I A IR D +N P+QM  +  G  +KT W  ++R DD T +   P+TGR+HQ+R+H   +GHP++GD LY  +E +A+ DRL+LHA  + F H
Sbjct:   32 IGPEKADCLVARAQADFPGARIVHRLDRDTSGLIVLARDADTHRELSRQFQDREVEKTYEAIAGGILAID--EGMIDAAIRKDMDNPPRQMIDDVQGRPSKTRWMVMERGDDCTRIQLFPLTGRSHQLRLHLQSIGHPILGDDLYAPDEMRARVDRLMLHATILEFTH 197          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A2D5B3Y4_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B3Y4_9BACT)

HSP 1 Score: 153 bits (387), Expect = 9.890e-42
Identity = 78/168 (46.43%), Postives = 112/168 (66.67%), Query Frame = 0
Query:  148 VGPG-VDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            +GP   DCL +R ++ +P AR VHRLD+DTSG++VMA   +  RE+ RQF +R   K Y AVV G++A     G I A +R D ++ P+Q+  +E G  AKT +  I+R DDRT ++ +PVTGR+HQ+R+H + +GHP++GD LY T E  + S RLLLHA  ++  H
Sbjct:   47 IGPEKADCLASRAEAAFPGARIVHRLDRDTSGVIVMARDADTHRELSRQFHDREVDKQYEAVVGGRLAVD--DGVIDAPMRKDLDDPPRQIIDDEQGRSAKTGFRVIERMDDRTRMELSPVTGRSHQLRVHMMSIGHPILGDDLYATPELLSMSRRLLLHATLLTITH 212          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A0J8YVV8_9GAMM (23S rRNA pseudouridylate synthase n=15 Tax=Enterobacterales TaxID=91347 RepID=A0A0J8YVV8_9GAMM)

HSP 1 Score: 153 bits (386), Expect = 1.020e-41
Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = 0
Query:  153 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            D ++TR++  +P A  VHRLD  TSG++V+ALT  A RE+ RQFRER PSKTY A V G++   P  G +   +  D  NRPKQ  C E+G  A+T WE + R D    V   P+TGR+HQ+R+H + +GHP++GD  Y + E KA + RLLLHA +++  H
Sbjct:   42 DSIMTRIQRDFPSAESVHRLDMSTSGVMVVALTKAAERELKRQFREREPSKTYIAQVWGQLV--PDEGLVDLPLICDWPNRPKQKVCFETGKAAQTEWEVLARDDVSCRVQLKPITGRSHQLRVHMLAMGHPILGDYFYASPEAKALASRLLLHAERLTITH 201          
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A4V2SBM6_9GAMM (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4V2SBM6_9GAMM)

HSP 1 Score: 153 bits (386), Expect = 1.110e-41
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 0
Query:  153 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 314
            DCL+TR+++ +P AR VHRLD DTSG++++AL+ ++   + R F+ER   K Y AVV G++  T  SGEI   I  D  NRP+Q  C  +G  A TL+   +R+DDRT +   PVTGR+HQ+R+H   LGHP++G  +Y   +  A + RLLLHA +I+FPH
Sbjct:   45 DCLITRLQADYPSARTVHRLDLDTSGIMIIALSAQSQSVLGRLFQERRVCKEYEAVVYGQV--TADSGEIDLPIARDWENRPRQKICRRTGRHALTLYTVTERRDDRTRLLLEPVTGRSHQLRIHMASLGHPILGCDMYAHPQALAMASRLLLHASRIAFPH 204          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R0_ECTSI1.940e-19487.25Ribosomal large subunit pseudouridine synthase A n... [more]
UPI0019D3727C7.550e-4346.91pseudouridine synthase n=1 Tax=Parahaliea mediterr... [more]
A0A2E2KKK0_9GAMM9.690e-4347.53RNA pseudouridine synthase n=1 Tax=Oceanospirillac... [more]
A0A1Q8FZ42_9PROT1.590e-4246.91Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74... [more]
A0A6P2AHX5_9BACT3.050e-4248.50RluA family pseudouridine synthase n=1 Tax=Phycisp... [more]
A0A8A4TYK2_9BACT3.960e-4246.91Pseudouridine synthase n=1 Tax=Sulfidibacter coral... [more]
A0A2E5DZI3_9BACT9.050e-4245.24RNA pseudouridine synthase n=1 Tax=Phycisphaerae b... [more]
A0A2D5B3Y4_9BACT9.890e-4246.43RNA pseudouridine synthase n=1 Tax=Phycisphaerae b... [more]
A0A0J8YVV8_9GAMM1.020e-4146.9123S rRNA pseudouridylate synthase n=15 Tax=Enterob... [more]
A0A4V2SBM6_9GAMM1.110e-4146.91Ribosomal large subunit pseudouridine synthase A n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 128..316
e-value: 4.1E-52
score: 178.8
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 153..314
NoneNo IPR availablePANTHERPTHR21600:SF43RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Acoord: 153..314
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 166..278
e-value: 2.0E-23
score: 83.3
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 169..183
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 17..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6691contigL-elsbetiae_contig6691:2360..6296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6691.15427.1mRNA_L-elsbetiae_contig6691.15427.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6691 2331..6296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6691.15427.1 ID=prot_L-elsbetiae_contig6691.15427.1|Name=mRNA_L-elsbetiae_contig6691.15427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
MEAKEHERDVREDGTAVTSELGIMFHDEDIVVLNKPQGLRTVPGKASGPE
AETRAHVEWHSGTKRQRQEFWTDVVHNACDSLLRDEETEGEEEFRGHLRR
LTRENNVPRKRSKFQNYTAVTLGLEGEEGDRVSARLWDAVDGQLKKEVGP
GVDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERV
PSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLW
ERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKS
DRLLLHARKISFPHVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR006224PsdUridine_synth_RluC/D_CS
IPR020103PsdUridine_synth_cat_dom_sf