mRNA_L-elsbetiae_contig6691.15427.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6691.15427.1
Unique NamemRNA_L-elsbetiae_contig6691.15427.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 2.770e-194
Identity = 260/298 (87.25%), Postives = 278/298 (93.29%), Query Frame = 3 
Query:   84 SELGIMFHDEDIVVLNKPQGLRTVPGKASGPEAETRAHVEWHSGTKRQRQEFWTDVVHNACDSLLRDEETEGEEEFRGHLRRLTRENNVPRKRSKFQNYTAVTLGLEGEEGDRVSARLWDAVDGQLKKEVGPGVDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPHVR 977
            S++ ++F D DIVVLNKP GLRTVPGKA GPEAETR HVEWHSGTKRQRQEFWTDVVH AC+SLL DE+TEGEEEFR HLRRLT+ENNVPRKRSKF NYTAVTLGLEGEEGD+VSARLWD VDG LKKEVGPGVDCLLTRV+SRWP+ARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAV+EG+MAKTPKSGE+ AK+RPD +NRPKQMFCEE GNEA T WERIKRK+DRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGT EG AKS+RLLLHAR+ISFPH R
Sbjct:   22 SDVDVIFSDPDIVVLNKPTGLRTVPGKAVGPEAETRVHVEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGTAKSERLLLHARRISFPHPR 319
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: UPI0019D3727C (pseudouridine synthase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3727C)

HSP 1 Score: 156 bits (394), Expect = 9.680e-43
Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 3 
Query:  486 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            DCL+TR++  +P A  VHRLD DTSG++++ LT E    + RQF++R   KTYTAVV G+ A+   SGEI   I  D +NRP+Q+ C E G +A T ++ ++R+ DR+ ++ +PVTGR+HQ+R+H   LGHP++G  +Y   E  A +DRL+LHA +I F H
Sbjct:   47 DCLITRLQRDYPSASIVHRLDLDTSGIMIIPLTRECHAHISRQFQQRRVEKTYTAVVWGEPARD--SGEIDLPIACDWDNRPRQLICHERGKQALTRYQVLERRGDRSRLELSPVTGRSHQLRIHMRELGHPILGCDMYAHPEALAMADRLMLHATRIGFEH 206
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A2E2KKK0_9GAMM (RNA pseudouridine synthase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E2KKK0_9GAMM)

HSP 1 Score: 155 bits (392), Expect = 1.240e-42
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 3 
Query:  486 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            DCL  RV++ +P AR VHRLD  TSGL+V+ALT+EA R++ R F+ER   K Y A++ GK ++  K G +   +  D  NRP Q+   E G  A T W+        T V+ TP+TGR+HQ+R+H   +GHP++GD  Y  E+ KA SDRLLLHA ++SFPH
Sbjct:   32 DCLWRRVQAEFPTARVVHRLDYATSGLMVLALTLEAQRDISRSFQERKTGKLYQAIISGKPSE--KQGSVDLPLICDWENRPLQIVDHEHGKNALTHWKATGEDSRGTRVELTPITGRSHQLRVHMQAMGHPIIGDRFYADEDSKALSDRLLLHAERLSFPH 191
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A1Q8FZ42_9PROT (Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74317 RepID=A0A1Q8FZ42_9PROT)

HSP 1 Score: 155 bits (392), Expect = 2.030e-42
Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = 3 
Query:  486 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            DCL  R ++ +P AR +HRLD DTSG++V+ALT  A   + +QF +R  SK+Y A V+G+M  T  SG +   +  D  NRP+QM C E G  A T WE +   D  + V   P+TGR+HQ+R+H +HLGHP++GD+LY   +  A SDRL LHAR++ F H
Sbjct:   49 DCLEARARADFPTARIIHRLDMDTSGVIVLALTAHAQAHIGKQFEKRQTSKSYIARVQGEM--TQSSGRVDQPLITDWPNRPRQMICHERGRRAVTDWEVLDIADGVSRVRLAPLTGRSHQLRVHMLHLGHPILGDNLYAPPDALAASDRLCLHARELGFRH 208
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A6P2AHX5_9BACT (RluA family pseudouridine synthase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6P2AHX5_9BACT)

HSP 1 Score: 154 bits (389), Expect = 3.900e-42
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 3 
Query:  483 VDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDAN--NRPKQMFCEESGNEAKTLWERIKRKDD--RTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            +DCL TRV+ ++P+AR VHRLD+DTSG++VMA   EA RE+ RQF +R   K YTA+V G +     +G I   IR D +  N+P+Q+   E G  + T +  I+R DD  RT +D  P+TGR+HQ+R+H   +GHP++GD LY   E  A SDRLLLHAR++ F H
Sbjct:   31 LDCLATRVQRQYPEARIVHRLDRDTSGVIVMAFDAEAHRELSRQFHDREVEKRYTAIVAGHVQSD--TGRIDLPIRKDMDPANKPRQLIDHEHGRPSITDYTVIERLDDPQRTRLDLKPITGRSHQLRLHLKEIGHPILGDDLYAPPEVLALSDRLLLHARELWFVH 195
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A8A4TYK2_9BACT (Pseudouridine synthase n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TYK2_9BACT)

HSP 1 Score: 154 bits (389), Expect = 5.070e-42
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 3 
Query:  486 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            D L +R +   P+AR VHRLD +TSG+ VMAL  ++ RE+ RQF +R   KTY A+  G M    + GE+   +  D  NRP+QM   E+G +A+T W  I R+ DRTWV  TP+TGR+HQ+R+H   +GHP++GD LY   E    + RLLLHA  +SF H
Sbjct:   45 DSLASRAQQLEPEARTVHRLDCETSGVTVMALDADSHRELSRQFHDREVLKTYVAICAGMMET--EQGEVNLPLVCDWPNRPRQMVDHENGKQAQTFWRVIHREPDRTWVQLTPITGRSHQLRVHLREIGHPILGDRLYAPPEVMRMAPRLLLHAEMLSFSH 204
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A2E5DZI3_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5DZI3_9BACT)

HSP 1 Score: 153 bits (386), Expect = 1.160e-41
Identity = 76/168 (45.24%), Postives = 109/168 (64.88%), Query Frame = 3 
Query:  471 VGPG-VDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            +GP   DCL+ R ++ +P AR VHRLD+DTSGL+V+A   +  RE+ RQF++R   KTY A+  G +A     G I A IR D +N P+QM  +  G  +KT W  ++R DD T +   P+TGR+HQ+R+H   +GHP++GD LY  +E +A+ DRL+LHA  + F H
Sbjct:   32 IGPEKADCLVARAQADFPGARIVHRLDRDTSGLIVLARDADTHRELSRQFQDREVEKTYEAIAGGILAID--EGMIDAAIRKDMDNPPRQMIDDVQGRPSKTRWMVMERGDDCTRIQLFPLTGRSHQLRLHLQSIGHPILGDDLYAPDEMRARVDRLMLHATILEFTH 197
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A2D5B3Y4_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B3Y4_9BACT)

HSP 1 Score: 153 bits (387), Expect = 1.260e-41
Identity = 78/168 (46.43%), Postives = 112/168 (66.67%), Query Frame = 3 
Query:  471 VGPG-VDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            +GP   DCL +R ++ +P AR VHRLD+DTSG++VMA   +  RE+ RQF +R   K Y AVV G++A     G I A +R D ++ P+Q+  +E G  AKT +  I+R DDRT ++ +PVTGR+HQ+R+H + +GHP++GD LY T E  + S RLLLHA  ++  H
Sbjct:   47 IGPEKADCLASRAEAAFPGARIVHRLDRDTSGVIVMARDADTHRELSRQFHDREVDKQYEAVVGGRLAVD--DGVIDAPMRKDLDDPPRQIIDDEQGRSAKTGFRVIERMDDRTRMELSPVTGRSHQLRVHMMSIGHPILGDDLYATPELLSMSRRLLLHATLLTITH 212
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A0J8YVV8_9GAMM (23S rRNA pseudouridylate synthase n=15 Tax=Enterobacterales TaxID=91347 RepID=A0A0J8YVV8_9GAMM)

HSP 1 Score: 153 bits (386), Expect = 1.300e-41
Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = 3 
Query:  486 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            D ++TR++  +P A  VHRLD  TSG++V+ALT  A RE+ RQFRER PSKTY A V G++   P  G +   +  D  NRPKQ  C E+G  A+T WE + R D    V   P+TGR+HQ+R+H + +GHP++GD  Y + E KA + RLLLHA +++  H
Sbjct:   42 DSIMTRIQRDFPSAESVHRLDMSTSGVMVVALTKAAERELKRQFREREPSKTYIAQVWGQLV--PDEGLVDLPLICDWPNRPKQKVCFETGKAAQTEWEVLARDDVSCRVQLKPITGRSHQLRVHMLAMGHPILGDYFYASPEAKALASRLLLHAERLTITH 201
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BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Match: A0A4V2SBM6_9GAMM (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4V2SBM6_9GAMM)

HSP 1 Score: 153 bits (386), Expect = 1.410e-41
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3 
Query:  486 DCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLWERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKSDRLLLHARKISFPH 971
            DCL+TR+++ +P AR VHRLD DTSG++++AL+ ++   + R F+ER   K Y AVV G++  T  SGEI   I  D  NRP+Q  C  +G  A TL+   +R+DDRT +   PVTGR+HQ+R+H   LGHP++G  +Y   +  A + RLLLHA +I+FPH
Sbjct:   45 DCLITRLQADYPSARTVHRLDLDTSGIMIIALSAQSQSVLGRLFQERRVCKEYEAVVYGQV--TADSGEIDLPIARDWENRPRQKICRRTGRHALTLYTVTERRDDRTRLLLEPVTGRSHQLRIHMASLGHPILGCDMYAHPQALAMASRLLLHASRIAFPH 204
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6691.15427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R0_ECTSI2.770e-19487.25Ribosomal large subunit pseudouridine synthase A n... [more]
UPI0019D3727C9.680e-4346.91pseudouridine synthase n=1 Tax=Parahaliea mediterr... [more]
A0A2E2KKK0_9GAMM1.240e-4247.53RNA pseudouridine synthase n=1 Tax=Oceanospirillac... [more]
A0A1Q8FZ42_9PROT2.030e-4246.91Pseudouridine synthase n=2 Tax=Maricaulis TaxID=74... [more]
A0A6P2AHX5_9BACT3.900e-4248.50RluA family pseudouridine synthase n=1 Tax=Phycisp... [more]
A0A8A4TYK2_9BACT5.070e-4246.91Pseudouridine synthase n=1 Tax=Sulfidibacter coral... [more]
A0A2E5DZI3_9BACT1.160e-4145.24RNA pseudouridine synthase n=1 Tax=Phycisphaerae b... [more]
A0A2D5B3Y4_9BACT1.260e-4146.43RNA pseudouridine synthase n=1 Tax=Phycisphaerae b... [more]
A0A0J8YVV8_9GAMM1.300e-4146.9123S rRNA pseudouridylate synthase n=15 Tax=Enterob... [more]
A0A4V2SBM6_9GAMM1.410e-4146.91Ribosomal large subunit pseudouridine synthase A n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6691contigL-elsbetiae_contig6691:2331..6296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score547.7
Seed ortholog evalue3.5e-153
Seed eggNOG ortholog2880.D7G4R0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0564@1,KOG1919@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPseudouridine synthase, RsuA/RluB/C/D/E/F
Ec32 orthologEc-20_000700.1
Exons7
Model size977
Cds size948
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6691.15427.1prot_L-elsbetiae_contig6691.15427.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6691 2360..6296 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.697203-UTR-L-elsbetiae_contig6691:2330..23591622816740.697203-UTR-L-elsbetiae_contig6691:2330..2359Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6691 2331..2359 +
1691683778.5056388-UTR-L-elsbetiae_contig6691:2330..23591691683778.5056388-UTR-L-elsbetiae_contig6691:2330..2359Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6691 2331..2359 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.7092743-CDS-L-elsbetiae_contig6691:2359..25271622816740.7092743-CDS-L-elsbetiae_contig6691:2359..2527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 2360..2527 +
1691683778.5190303-CDS-L-elsbetiae_contig6691:2359..25271691683778.5190303-CDS-L-elsbetiae_contig6691:2359..2527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 2360..2527 +
1622816740.7218237-CDS-L-elsbetiae_contig6691:3639..38031622816740.7218237-CDS-L-elsbetiae_contig6691:3639..3803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 3640..3803 +
1691683778.5325832-CDS-L-elsbetiae_contig6691:3639..38031691683778.5325832-CDS-L-elsbetiae_contig6691:3639..3803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 3640..3803 +
1622816740.7323291-CDS-L-elsbetiae_contig6691:4053..42061622816740.7323291-CDS-L-elsbetiae_contig6691:4053..4206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 4054..4206 +
1691683778.5435326-CDS-L-elsbetiae_contig6691:4053..42061691683778.5435326-CDS-L-elsbetiae_contig6691:4053..4206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 4054..4206 +
1622816740.7427251-CDS-L-elsbetiae_contig6691:4376..44891622816740.7427251-CDS-L-elsbetiae_contig6691:4376..4489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 4377..4489 +
1691683778.5530763-CDS-L-elsbetiae_contig6691:4376..44891691683778.5530763-CDS-L-elsbetiae_contig6691:4376..4489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 4377..4489 +
1622816740.7533839-CDS-L-elsbetiae_contig6691:5071..51811622816740.7533839-CDS-L-elsbetiae_contig6691:5071..5181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 5072..5181 +
1691683778.5629299-CDS-L-elsbetiae_contig6691:5071..51811691683778.5629299-CDS-L-elsbetiae_contig6691:5071..5181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 5072..5181 +
1622816740.7634482-CDS-L-elsbetiae_contig6691:5896..60071622816740.7634482-CDS-L-elsbetiae_contig6691:5896..6007Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 5897..6007 +
1691683778.572834-CDS-L-elsbetiae_contig6691:5896..60071691683778.572834-CDS-L-elsbetiae_contig6691:5896..6007Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 5897..6007 +
1622816740.7735114-CDS-L-elsbetiae_contig6691:6167..62961622816740.7735114-CDS-L-elsbetiae_contig6691:6167..6296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 6168..6296 +
1691683778.5829856-CDS-L-elsbetiae_contig6691:6167..62961691683778.5829856-CDS-L-elsbetiae_contig6691:6167..6296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6691 6168..6296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6691.15427.1

>prot_L-elsbetiae_contig6691.15427.1 ID=prot_L-elsbetiae_contig6691.15427.1|Name=mRNA_L-elsbetiae_contig6691.15427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
MEAKEHERDVREDGTAVTSELGIMFHDEDIVVLNKPQGLRTVPGKASGPE
AETRAHVEWHSGTKRQRQEFWTDVVHNACDSLLRDEETEGEEEFRGHLRR
LTRENNVPRKRSKFQNYTAVTLGLEGEEGDRVSARLWDAVDGQLKKEVGP
GVDCLLTRVKSRWPDARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERV
PSKTYTAVVEGKMAKTPKSGEILAKIRPDANNRPKQMFCEESGNEAKTLW
ERIKRKDDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTEEGKAKS
DRLLLHARKISFPHVR
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mRNA from alignment at L-elsbetiae_contig6691:2331..6296+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6691.15427.1 ID=mRNA_L-elsbetiae_contig6691.15427.1|Name=mRNA_L-elsbetiae_contig6691.15427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3966bp|location=Sequence derived from alignment at L-elsbetiae_contig6691:2331..6296+ (Laminarionema elsbetiae ELsaHSoW15)
TAACGCTGCGGGTCTATCTACTATCCGGCATGGAGGCGAAAGAGCATGAA
AGAGATGTAAGAGAAGATGGCACCGCGGTGACAAGCGAACTGGGTATTAT
GTTCCATGATGAGGACATTGTAGTGCTGAATAAACCCCAGGGCCTGCGGA
CGGTCCCCGGCAAGGCTTCTGGTCCAGAGGCTGAGACAAGAGCACATGTG
AGATCAGCAGCAGTAGATGGCGAGGTAGTCTATACTGCTGAAATCTGGGT
TTGGCTGCTGATGCGGTTTCAAGCATATCAATACAACAGAGTCGGGTACA
GCGGCCACGGAAAAGTTATGAGAGCTGCTTGACCACGGCCGGGGTTCAAC
GTTCAACAGGGTGGCGCGAATAACTTATAGAGCTTGGTGTCGTTCGGATG
ATTTGTATACCTACTCCTATAAATTTGAACACGTTATCTCAGCAATTGGG
TCCTCATCCTACTGTTTTGCTTGCCGATCCTCCATCGCCTGAATTTCTGC
TAAACGAAAAACGCTGTCATGATGTTGTAACTCGTTGTAGACTCACCTGC
TGCGTGTAGGACAGTGATGTACATATCCGCTGGAGGGGGTCCAACCCCCC
CCTCCTATGTGACCCCGGTTGGGTCGTCTAGCTAGAGTAGAAGTGGAGGA
TGGGGCCAGAGGGGCAGACGACAAAAGCCAATAATGTGCAGACAAAAATA
TATATATATATATATATCCGGGGTTCGAGCAGGGTACTGACCGGATATAT
CCGCTGTGACCGGGGACCAAAAATTCCCGTCCCCGGGGTGGTATACAACG
TATACTTAAGATATTTTGGCAGTTCGGAAGAAGCTCGCTGTCTACTCACG
GTGATGTAGTGTGTACCGCGTGTTTGCTGTCATTGCTGATGCTGCTGCAG
CCTGTCCATCGTTGCATTGGCAATGTTGCTGCAATGTTACAACGCGACCT
TGTGATGACGATTTTTTTTTTAAATTTCGGTCAAGTAGTCTATACTCCTG
CGAGTCTATGTAGCTATGTAGTGTGAGGGGGGTCCACACTTGGGGTACCC
CCCAACCCAAATGAGGGGCCTCAATATATCTGGAAAATATCCGGGAATTC
CCAGGGTACCTACTGCTGAAACCTGTATCCGGATATATCCGGTACCCGGA
TATGTAAATCACTGGTGTAGGATGACCGCTCTCACGGTGACTTTCGCCTT
ATCTTTATCTAGTCGGTAGTAGTGGGGTACCGGAGTAGCGAATCGCTGGC
TATTTCCGTGCGGGCGGGCTGTTCATGAACTCCGTGTTGTGCGGGAATTG
TGCTGTCAGGTCGAGTGGCATAGCGGAACGAAGAGGCAAAGGCAAGAGTT
TTGGACAGACGTGGTGCACAACGCTTGCGACTCCCTTCTGCGCGATGAAG
AGACCGAGGGGGAAGAAGAGTTCAGAGGACATCTGCGCCGTCTGACCAGA
GAAAACAACGTCCCGAGAAAGAGGCACGTGCACGCCTATTTAATGGTTCA
CGGTGCTTAAACGAAGGCGCCAAAAACAAAACTTCTGTGCCTGATGGGCG
TGTCTCGTCCTCCTTCTTGTGTGGTTTGAAGTATTTAGGCAGAGAAAAAC
CGATGTGTGCAATAATGCAAAGCAGCCCGCTCACGTAAAGACACCAAAGT
AAAATGTAAGTGAACGGGCGGGCTCACGGACGCGACTGTTGCCCCCTCCC
TCCGTGCCCCGTGAACTGCGCAGAAGTAAGTTTCAGAATTACACGGCAGT
CACGCTCGGTCTCGAAGGCGAGGAAGGGGACAGGGTATCAGCTCGCTTGT
GGGACGCTGTTGATGGCCAACTCAAGAAAGAAGTTGGGCCCGGCGTAGAC
TGCCTCTTGACTCGGGTAAAATCCAGGTGCGTTTTTGCCTCCATGCCGGT
TTGTAAAAATGTTTGCACCTTTTGGGCAGACTCCGTTGCTCGCGTTACGT
CGCGGGAGAGTTGTAGAGTAAACCTATTCGTCTACCGTGATCCCTTTCGG
CCAAAGCCTCAGTTTCCCACGAAACTGCTGTCTGCTTTTCCGGTAGATGG
CCCGACGCACGGCATGTGCATCGCCTGGATCAAGACACGTCGGGGTTGGT
GGTTATGGCTCTTACGGTGGAGGCGGCAAGGGAAATGTGCAGACAGTTCC
GCGAACGAGGTGAGCGTCGATCAGCCCGGATATGCAACCTGGGATGCACT
CGCAGATTGTTCTCGTCCAAGCTCCGTGTGCTGTTGTCGGTAGTGGAGGT
GATGAAGCACCACTACTGTTCGCTGCATCGGCTGTCTGTATTGGAATACT
TCGCATCATTGTACTTGTACTTGTGCGAGCGGGAGCGGGAGTGGATATAC
ACAGCTCGCTCGGGTAGCGAATGGTCTTCAGATGCAGCATTATGTGCGCC
TCGAACCAACCCTGGGAAAGTTGGGGGCAGCGCAGTGGTCTGGAGGCACC
AATTTTAGGCGCCTTGTACATGTGTATACACTCATCACACGGGGGGAGAA
TCGTGAAGTGACTGGACTAATTAATTATTTTTCAATCACCCCCACGATTT
GTAACTGAGAGCTCTACCCACCCCAACGCCTTTTTGCAAGAGCAAGATCT
CCCTGGTCCTGGTCGGCTAGATACGGCTGGTCCGCCGACGAGATATGCAT
GCCCAGGTCGCGCCAGGATTTGAACGTTTTACCGCAATATTGTCGCCGTG
TCTTTTCAACACACGCACGTCGCAATTGTTCTCGCTCGCAGTTCCCTCCA
AAACGTACACGGCAGTTGTGGAGGGAAAGATGGCCAAAACACCGAAGAGC
GGCGAGATATTGGCCAAAATACGCCCTGATGCCAACAATCGACCAAAGCA
AGTGAGGACGTGAAACAACAGAGTGTGACACCCGCAAACGTGGTGTGGGT
GTGTGTGTGTCCTTTCCATTTATCCTGGCCGACAGTCCCCCAAGGGGAGA
CGTGTACTACACCTTGCGGTGTCCTTAGAGGTACTACACTTTGCAGTGCA
TTTGTCTGTACAACTAGAACCAACCGGGGTCACACAGGAGGGGGGTGAGC
ACTGGGGACTTTTTCTTCTTTTTCCTTTTTTTGCCCCACCTTCCTCCTGC
GGTGCTTGCTTTCATTTTTATCGCGAGAAGGCTTCAGCTGTCCGTTTCCC
TCAACGTGATTACGTCGAAATCTGGTACTGGTACTCACGAGCTTTTCAGC
TTTTATCGCTTTCACCTGCAAAGCCGCTAGATAAACACTCGGATTGAACC
CCTAGACTTTACTGCTAGTGGGTGGGTACGAAGATAAACCATTAGACCAC
CGGGGCGGTGGACGTAATTTTAATTCCCTTGAAATGTACATGATAAACCT
GTGTAGTCCGTATTGACGCCGTTGTTTGTCTGACAAGTTACAAGTAGCGG
ATTACAGCCGAGCAATTCAGACGATGTCATGCTGGCCATCGTATTTCAAT
GATGGAAAGTGCGCAAAGGCTACAAACAACGTATTGGCGATTTCGCCGCA
ATATATCGCACTTTTCGCACCGCCTCGATTCCTGCTGGGCGGTGTGCGTA
CTTCCTCGTGCTTAAGATGTTCTGCGAAGAATCGGGGAACGAGGCAAAGA
CACTCTGGGAACGAATCAAGCGGAAGGACGACCGCACATGGGTGGACTTT
ACGCCCGTCACAGGCCGGACGCACCAGGTGTGCATACACTCTCGCCGCTG
CGAGCCGGGCAAGAGGGCACATCGTACCTGCCCCAGTGTTGTGTGATTCG
TAAGCCGCACTGACAGAAACTCACATTTGCCTACCCTTTCGTCTAACTCA
GCATGGTCCGTGCGACGTTGCTCATTCTTGTTTTCAGATCCGGATGCACG
CCGTGCACCTGGGCCACCCCGTGATGGGCGACTCTTTGTACGGTACAGAA
GAAGGGAAGGCTAAGTCGGACAGGCTGCTGCTCCACGCCAGGAAAATCTC
CTTCCCACACGTGAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6691:2331..6296+

>mRNA_L-elsbetiae_contig6691.15427.1 ID=mRNA_L-elsbetiae_contig6691.15427.1|Name=mRNA_L-elsbetiae_contig6691.15427.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig6691:2331..6296+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGCGAAAGAGCATGAAAGAGATGTAAGAGAAGATGGCACCGCGGT
GACAAGCGAACTGGGTATTATGTTCCATGATGAGGACATTGTAGTGCTGA
ATAAACCCCAGGGCCTGCGGACGGTCCCCGGCAAGGCTTCTGGTCCAGAG
GCTGAGACAAGAGCACATATGGAGGCGAAAGAGCATGAAAGAGATGTAAG
AGAAGATGGCACCGCGGTGACAAGCGAACTGGGTATTATGTTCCATGATG
AGGACATTGTAGTGCTGAATAAACCCCAGGGCCTGCGGACGGTCCCCGGC
AAGGCTTCTGGTCCAGAGGCTGAGACAAGAGCACATGTCGAGTGGCATAG
CGGAACGAAGAGGCAAAGGCAAGAGTTTTGGACAGACGTGGTGCACAACG
CTTGCGACTCCCTTCTGCGCGATGAAGAGACCGAGGGGGAAGAAGAGTTC
AGAGGACATCTGCGCCGTCTGACCAGAGAAAACAACGTCCCGAGAAAGAG
GTCGAGTGGCATAGCGGAACGAAGAGGCAAAGGCAAGAGTTTTGGACAGA
CGTGGTGCACAACGCTTGCGACTCCCTTCTGCGCGATGAAGAGACCGAGG
GGGAAGAAGAGTTCAGAGGACATCTGCGCCGTCTGACCAGAGAAAACAAC
GTCCCGAGAAAGAGAAGTAAGTTTCAGAATTACACGGCAGTCACGCTCGG
TCTCGAAGGCGAGGAAGGGGACAGGGTATCAGCTCGCTTGTGGGACGCTG
TTGATGGCCAACTCAAGAAAGAAGTTGGGCCCGGCGTAGACTGCCTCTTG
ACTCGGGTAAAATCCAGAAGTAAGTTTCAGAATTACACGGCAGTCACGCT
CGGTCTCGAAGGCGAGGAAGGGGACAGGGTATCAGCTCGCTTGTGGGACG
CTGTTGATGGCCAACTCAAGAAAGAAGTTGGGCCCGGCGTAGACTGCCTC
TTGACTCGGGTAAAATCCAGATGGCCCGACGCACGGCATGTGCATCGCCT
GGATCAAGACACGTCGGGGTTGGTGGTTATGGCTCTTACGGTGGAGGCGG
CAAGGGAAATGTGCAGACAGTTCCGCGAACGAGATGGCCCGACGCACGGC
ATGTGCATCGCCTGGATCAAGACACGTCGGGGTTGGTGGTTATGGCTCTT
ACGGTGGAGGCGGCAAGGGAAATGTGCAGACAGTTCCGCGAACGAGTTCC
CTCCAAAACGTACACGGCAGTTGTGGAGGGAAAGATGGCCAAAACACCGA
AGAGCGGCGAGATATTGGCCAAAATACGCCCTGATGCCAACAATCGACCA
AAGCAATTCCCTCCAAAACGTACACGGCAGTTGTGGAGGGAAAGATGGCC
AAAACACCGAAGAGCGGCGAGATATTGGCCAAAATACGCCCTGATGCCAA
CAATCGACCAAAGCAAATGTTCTGCGAAGAATCGGGGAACGAGGCAAAGA
CACTCTGGGAACGAATCAAGCGGAAGGACGACCGCACATGGGTGGACTTT
ACGCCCGTCACAGGCCGGACGCACCAGATGTTCTGCGAAGAATCGGGGAA
CGAGGCAAAGACACTCTGGGAACGAATCAAGCGGAAGGACGACCGCACAT
GGGTGGACTTTACGCCCGTCACAGGCCGGACGCACCAGATCCGGATGCAC
GCCGTGCACCTGGGCCACCCCGTGATGGGCGACTCTTTGTACGGTACAGA
AGAAGGGAAGGCTAAGTCGGACAGGCTGCTGCTCCACGCCAGGAAAATCT
CCTTCCCACACGTGAGAATCCGGATGCACGCCGTGCACCTGGGCCACCCC
GTGATGGGCGACTCTTTGTACGGTACAGAAGAAGGGAAGGCTAAGTCGGA
CAGGCTGCTGCTCCACGCCAGGAAAATCTCCTTCCCACACGTGAGA
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