prot_L-elsbetiae_contig669.15422.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig669.15422.1
Unique Nameprot_L-elsbetiae_contig669.15422.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length579
Homology
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI)

HSP 1 Score: 677 bits (1748), Expect = 1.080e-238
Identity = 452/594 (76.09%), Postives = 468/594 (78.79%), Query Frame = 0
Query:    1 MGYVEQQPAAPFVQDANGI-----GGVMPVVGAIPXXXXXXXXXXXXXXXXTGTTRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGP-PMMGQPMGGHMQQXXXXXXXXXQGGG-----APMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSKTGGA----SNKAXXXXXXXXXXXXXXXXXPVATTEAXVAAPAVPAA-APISTTS 578
            MGYVEQ   A + QDANG+     GGVMPVVG +                 TG TRVYVGNLSWETEWQDLKDHMR+AGEVVRADVM+DASGRSKGCGIVEYRTPAEA EAINTLLDTELKGRLIFVREDREAAXXXXXXXXXX XX                     PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGG+VIRADVM+DQ GRSRGCGIVE+A+P+QA QAIEQLNNSELK RMIFVREDRE+G         XXXXXXXXXXXXXXXXXMVGQMQMGPMG F GQ FA GP  +MGQ MGGHMQQ     XXXX           MPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNT LGGRPIFVREDREQQ+PRQXXXXXXXXXXXXXXXXXXXXXXX      + AGRQLYVGNLSFETTWADLKDHFRT+GEVERADVMMDGSRRSKGWGTVRF T EEAQ+AIQELNGTELGSRQIEVREDSKTGG     S             XXXX   PV  TEA  AAPA  A  APISTTS
Sbjct:    5 MGYVEQP--AQYAQDANGVVVNGMGGVMPVVGGM--------SAPPVGVMTTGITRVYVGNLSWETEWQDLKDHMRTAGEVVRADVMRDASGRSKGCGIVEYRTPAEAQEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXMXXG--------------------PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGT------PGXXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXE-----NLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSKTGGXXXXXSYPKAGNAKAGATAXXXXSADPVGATEA--AAPAASATVAPISTTS 555          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE)

HSP 1 Score: 513 bits (1322), Expect = 3.000e-176
Identity = 318/372 (85.48%), Postives = 330/372 (88.71%), Query Frame = 0
Query:  164 PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGP-PMMGQPMGGHMQQXXXXXXXXXQGGGAP--MPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSKTGG 532
            PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGG+VIRADVM+DQ GRSRGCGIVE+A+P+QA QAIEQLNNSELK RMIFVREDRE+G          XXXXXXXXXXXXXXXXMVGQMQMGPMG F GQ FA GP  +MGQ MGGHMQQ     XXXX        MPQATGNRIYVGNLAWTVEWQELKDHMRTVGKV+HADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNT LGGRPIFVREDREQQ+PRQXXXXXXXXXXXXXXXXXXXXXXXX     + AGRQLYVGNLSFETTWADLKDHFRT+GEVERADVMMDGSRRSKGWGTVRF T EEAQ+AIQELNGTELGSRQIEVREDSKTGG
Sbjct:    5 PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGT----PGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXXE----NLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSKTGG 368          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA)

HSP 1 Score: 338 bits (866), Expect = 3.820e-106
Identity = 255/482 (52.90%), Postives = 295/482 (61.20%), Query Frame = 0
Query:   49 TTRVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            T RVYVGNLSWET W++LKDHM++ G EV RADV+    GRSKGCGI+E+ T   A  A+ TL DTEL GR IFVREDRE    XXXXXXXXXXXXXXXXXXXXXXXXX         G   Q  RVYVGNL+WDVA QDLKDHMR  G +V+ A+VM +  GRS+GCGIVEFA   +A +AI  L ++ELKGRMIFVREDRE    XXXXXXXX                          GGF G+                                          +YVGNLA+   WQ+LKDHMR  G V  A++LQ  DGRSKGCGIV Y+  + A+RAIREL NT L GRPIFVREDREQ     XXXXXXXXXXXXX                  AG QL+VGNLS++T+W +LKDHFR  G+VERA+VM     +S+G+GTVRF    +A  AIQ LNG EL  R +EV+ D K
Sbjct:  111 TRRVYVGNLSWETTWRELKDHMKTTGCEVTRADVLCSPDGRSKGCGIIEFETAEGAQRAVLTLNDTELMGRQIFVREDREEGSGXXXXXXXXXXXXXXXXXXXXXXXXXRYAS-----GGDAQTRRVYVGNLSWDVALQDLKDHMRNAG-EVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDRETTXXXXXXXXXXAV-----------------------FGGFQGR-----------------------------------XXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRVA-------------AGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 515          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.470e-102
Identity = 245/500 (49.00%), Postives = 286/500 (57.20%), Query Frame = 0
Query:   49 TTRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNR------IYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GDFA-------GRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            T R+YVGNLSW   W++LKDHM+SAG+V RAD+++   GRSKGCGIVE+ T  EA  A+ TL D+EL GR IFVREDREA                                    + +   + RVYVGNLA++VAWQDLKDHMR  G +V  A+VM    GRS+GCGIVEFAD + A  AI+ LN++EL GR IFVREDRE                               Q   G  GG  GQ               H   XXXXXX    G GA       N       +YVGNLA+   WQELKDHMR VG +  AD+LQ  DGRSKGCGIV Y+  + A RAIREL N+ L GRPIFVREDRE      XXXXXXXXXXXXXXXXXXXXXXXXXXXX      G+         G QLYVGNLS+ T W DLKDHF   G V+RA+V      R KG+G +RF T  +A  AI+ LNG E   R++EVR D+K
Sbjct:   89 TKRLYVGNLSWSVSWRELKDHMKSAGDVTRADILQTPDGRSKGCGIVEFATAEEASNAVETLNDSELMGRQIFVREDREAE-----------------------------------KAADASSKRVYVGNLAYEVAWQDLKDHMRDAG-EVQFAEVMMMNDGRSKGCGIVEFADEEGAQNAIDTLNDTELCGRQIFVREDRE-------------------------------QKVSG--GGHHGQ---------------HXXXXXXXXXLNRVGXGAXXXXGRYNNQLGNVNVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLNGGEFMGRKLEVRLDNK 504          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA)

HSP 1 Score: 323 bits (829), Expect = 4.300e-102
Identity = 231/482 (47.93%), Postives = 273/482 (56.64%), Query Frame = 0
Query:   51 RVYVGNLSWETEWQDLKDHMRSAGE---VVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            RVYVGNL+WE  WQDLKDHMR  GE   V RADVM+   GRSKGCG+VE+ T   A  A+  + DTEL GR IFVREDREAA                                         + RVYVGNL+W+V WQDLKDHMR   GDV  A+VM+   GRS+GCGIVE+A  +QA +AI  LN+++L GRMIFVREDRE G  XXXXXXXXXXXXXXXXXXXXXX                                                       +    +YVGNLA+   WQ+LKDHMR  G V  AD+L   DGRSKGC IV Y+  + A RAIREL N+ L GRPIFVREDREQ   R XXXXXXXXXX                   D    QL+VGNLS++TTW +LKDHF+  GEV+R +VM     R KG+GTV F   ++A +AI+ +NG EL  R +EV+ D+K
Sbjct:    3 RVYVGNLAWEATWQDLKDHMRGLGEGCEVTRADVMQTHDGRSKGCGLVEFATAEGARRAVLMMNDTELHGRQIFVREDREAAAALPAPGATGGRAVDAAEAG---------------------SRRVYVGNLSWEVVWQDLKDHMR-QAGDVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDREVGGXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------SNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQGGGRXXXXXXXXXXXRSAGYDGDYDRMPVD----DGTATQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVDAK 403          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A7S3Q3W4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3W4_9STRA)

HSP 1 Score: 325 bits (833), Expect = 9.410e-102
Identity = 211/480 (43.96%), Postives = 263/480 (54.79%), Query Frame = 0
Query:   51 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            RVYVGNL+WE  W++LKDHM+ AG EV RADV+    GRSKGCGIVE+ + AE  +    L DT+L GR IFVREDRE+                                         Q+ RVYVGNL+W+VAWQDLKD+MR  G +V+ ++VM++  GRS+GCGIVE+A P++A  A   L+++ELK RMIFVREDRE  +G                          G  Q G  G  +                                            +YVGNLA+   WQ+LKDHMR  G V  A+VLQ  DG SKGCGIV Y++ R ++RAIREL  + L GRPIFVREDREQ     XXXXXXXXXXX XX X                G QL+VGNLSF+T W +LKDHFR  G+VER +V+     R KG+GTVRF   ++A  AI+ LNG EL  R+++VR D+K
Sbjct:   84 RVYVGNLAWEVTWKELKDHMKEAGCEVTRADVLASPDGRSKGCGIVEFAS-AEGAQRALLLNDTDLAGRQIFVREDRESGNGGGYYTQQPGNPASATSGGNDASEE-------------KQSCRVYVGNLSWEVAWQDLKDYMRSAG-EVVYSEVMTNADGRSKGCGIVEYATPEEAKNACTTLSDTELKDRMIFVREDRETSSGG-------------------------GNQQGGNRGSTS--------------------------------------------VYVGNLAYETSWQDLKDHMRAAGNVDQANVLQQEDGTSKGCGIVVYQNARDSSRAIRELQESVLHGRPIFVREDREQGGXXXXXXXXXXXXXXFXXRXRGGHQRKPVTP-----GTQLFVGNLSFDTNWTELKDHFRQCGDVERVEVIEGHDGRKKGFGTVRFYNAKDAANAIERLNGVELQGRELQVRVDNK 474          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A7S2W0R0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0R0_9STRA)

HSP 1 Score: 324 bits (831), Expect = 4.830e-101
Identity = 228/484 (47.11%), Postives = 277/484 (57.23%), Query Frame = 0
Query:   51 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPR----QXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            RVYVGNLSW+  W+DLKD M+S G EV RADV+    GRSKGCGIVE+ T   A +A+ TL DTELKGR IFVREDRE+                                     G  +Q  RVYVGNL+WDVAWQDLKDHMR   G+V  A+VM++  GRS+GCGIVEFA  ++A  AIE L +SELKGRMIFVREDRE+ +                           G  Q G   G                                              ++VGNL++   WQ+LKDHMR  G V  A+VL   DGRSKGCGIV+Y+  + A+RA+REL N+ L GRPIF REDREQ        + XXXXXXXXXXXXXXXXXXXXXXXXXX     G QL+VGNLS +TTW DLKDHFR  G+VERA+V+ +G R +  +GT+RF   ++A  AI  L+G E    ++EVR D++
Sbjct:   98 RVYVGNLSWDVSWRDLKDWMQSTGCEVSRADVLASPDGRSKGCGIVEFATAEMAEKAVETLNDTELKGRAIFVREDRES------NSSSGYYTQQTEGESAPSPSASPAEADSCASGGESQGRRVYVGNLSWDVAWQDLKDHMR-QAGEVSFAEVMNESDGRSKGCGIVEFATAEEAKDAIETLTDSELKGRMIFVREDRESTSSGGG-----------------------GNFQSGSKEG-------------------------------------------STSVFVGNLSYETSWQDLKDHMRQAGNVDEANVLSMDDGRSKGCGIVQYQRAQDADRAVRELQNSILQGRPIFCREDREQPGAAPSRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGGGSQLFVGNLSADTTWKDLKDHFRQCGDVERAEVV-EGKRST--FGTIRFFKEKDALDAISNLDGVEFQGHELEVRNDNR 505          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A7S4AB42_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AB42_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.610e-99
Identity = 226/490 (46.12%), Postives = 274/490 (55.92%), Query Frame = 0
Query:   51 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDRE----AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGSGN---QNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMP-QATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSK-GCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDR-EQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            RVYVGNL+WE  WQDLKD M++   EVVR DVM+ + GRSKGC IVE+ T   A EA+ TL DTEL GR IFVREDRE     A                                     S N   Q+ RVYVGNL+WDV W DLKDHM+ +G DV+RADV+ +  GRS+GCGIVEF   + A +AIE L ++EL+GRMIFVREDRE G+G                                                  +  GGH  +          G G+  P Q + N +YV NL++ V WQ+LKDHMR  G V  A +L   DG +  GCGIV Y+  R A RAIREL  + L GRP+ +RED+      R   XXXXXXXXXXXXXXXXXXXXX           QLYVGNLS++TTW +LK+HF  +GEV RADV    + RSKG+G V+F+ PE+AQTAI  L+G EL  R +EVR D K
Sbjct:   67 RVYVGNLAWEISWQDLKDLMKTLNHEVVRVDVMQTSDGRSKGCAIVEFATSEGAAEAVLTLNDTELSGRRIFVREDREKSNIGAGGRDFSARGGRYSNNNQRNRHHGTNQSGSNYNHNSTVSSNPESQSRRVYVGNLSWDVTWSDLKDHMKTVG-DVVRADVICEHNGRSKGCGIVEFETEEGAQEAIETLTHTELRGRMIFVREDRE-GSGS-------------------------------------------------EGKGGHALRRI--------GAGSANPNQTSNNSVYVWNLSYDVSWQDLKDHMRKAGNVDQATILTGNDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDKIASAGSRSDRXXXXXXXXXXXXXXXXXXXXXGHGDEPASELTQLYVGNLSYDTTWKELKEHFNQAGEVARADVKTSDNGRSKGFGIVKFARPEDAQTAISTLSGVELDGRALEVRPDHK 497          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A448YVD1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVD1_9STRA)

HSP 1 Score: 317 bits (813), Expect = 9.560e-99
Identity = 204/489 (41.72%), Postives = 250/489 (51.12%), Query Frame = 0
Query:   51 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSK-GCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDR-EQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            RVYVGNL+WE  WQDLKD M++   EVVR DV++ + GRSKGCGIVE+ TP  A EA+ TL DTEL GR IFVREDRE A                                             G+Q+ RVYVGNL+WDVAW DLKDHM+   G+V+RADV+ +  GRS+GCGIVEF   + A  AI  L +SEL GR IFVREDRE G+G                                  GG   ++  PG                               Q++   +YV NL++ V WQ+LKDHMR  G V  A +L   DG +  GCGIV Y+  R A RAIREL  + L GRP+ +RED+   + PR                                   QLYVGNLS++TTW +LK+HF  +GEV RADV    S RSKG+G VRF++PE+AQ AI  L GTEL  R IEVR D +
Sbjct:   63 RVYVGNLAWEVSWQDLKDLMKTLDHEVVRVDVLQTSDGRSKGCGIVEFATPEGAAEAVLTLNDTELSGRRIFVREDREQASGRETGHNNYPYSSSRAGGRYGNPRSRYGGPAIHHGNHQGVSSDPGSQSRRVYVGNLSWDVAWADLKDHMK-QAGEVVRADVICEHNGRSKGCGIVEFETEEGARNAIATLTHSELLGRTIFVREDRE-GSGSEAK------------------------------GGQRPKRNGPG----------------------------AFHQSSNKSVYVWNLSYDVSWQDLKDHMRRAGNVDQATILTGSDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDKIAGRGPRPARGPRSGSDEPRAPPGVVT---------------QLYVGNLSYDTTWRELKEHFLQAGEVVRADVKASDSGRSKGFGIVRFASPEDAQNAIATLAGTELDGRPIEVRPDHR 476          
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Match: A0A1E7F6P9_9STRA (RRM_1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6P9_9STRA)

HSP 1 Score: 312 bits (800), Expect = 2.700e-96
Identity = 255/498 (51.20%), Postives = 298/498 (59.84%), Query Frame = 0
Query:   51 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMKDASGRSKGCGIVEYRTPAEALEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRG-----SGN---QNARVYVGNLAWDVAWQDLKDHMRGLGGDVIRADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRENGNGXXXXXXXXXXXXXXXXXXXXXXXXMVGQMQMGPMGGFAGQQFAPGPPMMGQPMGGHMQQXXXXXXXXXQGGGAPMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPLGGRPIFVREDREQQHPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFA----------GRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFSTPEEAQTAIQELNGTELGSRQIEVREDSK 529
            RVYVGNL+WE  WQDLKD M++   EVVR DVM+ + GRSKGCGIVE+ T   A EAI TL DTEL GR IFVREDRE +                      XXXXXXXXXXXX        S N   Q+ RVYVGNL+WDV+W +LKDHM+   G+V+RADV+S+  GRS+GCGIVE+A  D+A QAI  L ++EL+GR IFVREDRE G  XXXXXXXXXXXXXXXXXXXXXXXX                                                        N +YV NL++ V WQ+LKDHMR  G V  A VL   DG S GCGIV ++  R A RAIREL  + L GRP+ +REDR        XXXXXXXXXXXXXXXXXXXXX       +F+          G QLYVGNLS+ TTW DLK+HF  +GE+ RADV    S RSKG+G VRF+  ++A+ AI  L G EL  R +EVR D K
Sbjct:   70 RVYVGNLAWEVSWQDLKDLMKTTNHEVVRCDVMQTSDGRSKGCGIVEFATNEGAAEAILTLNDTELSGRSIFVREDRETSNSGGTSSNPREHSSRDRNRNRHXXXXXXXXXXXXXXXXXXTVSSNPESQSCRVYVGNLSWDVSWPELKDHMK-TAGEVVRADVISEHNGRSKGCGIVEYATEDEAQQAIATLTHTELQGRTIFVREDRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------XXXGSNSVYVWNLSYDVSWQDLKDHMRKAGNVDQATVLTGNDGTSIGCGIVVFQSARDAQRAIRELQESDLNGRPVRLREDRVSGTGGGGXXXXXXXXXXXXXXXXXXXXXRTRGGGRNFSQPDNEDPVPEGTQLYVGNLSYSTTWRDLKNHFSQAGEIVRADVKTSDSGRSKGFGIVRFTRSDDAEAAISSLGGIELDGRSLEVRLDHK 517          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig669.15422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGN3_ECTSI1.080e-23876.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8N0_9PHAE3.000e-17685.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4IUY5_9STRA3.820e-10652.90Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2KX18_9STRA1.470e-10249.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1BM28_9STRA4.300e-10247.93Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3Q3W4_9STRA9.410e-10243.96Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2W0R0_9STRA4.830e-10147.11Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4AB42_9STRA1.610e-9946.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448YVD1_9STRA9.560e-9941.72Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F6P9_9STRA2.700e-9651.20RRM_1-domain-containing protein n=1 Tax=Fragilario... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 173..246
e-value: 2.3E-22
score: 90.3
coord: 51..123
e-value: 2.0E-20
score: 83.9
coord: 336..408
e-value: 1.7E-23
score: 94.0
coord: 453..525
e-value: 4.1E-24
score: 96.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 454..522
e-value: 3.3E-20
score: 71.7
coord: 52..119
e-value: 3.5E-16
score: 58.8
coord: 337..405
e-value: 5.6E-19
score: 67.7
coord: 174..242
e-value: 5.1E-19
score: 67.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 335..412
score: 16.125
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 452..529
score: 18.069
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 172..250
score: 16.517
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 50..127
score: 15.272
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 303..431
e-value: 1.0E-26
score: 95.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 168..252
e-value: 2.5E-25
score: 90.3
coord: 450..531
e-value: 1.3E-25
score: 91.2
coord: 46..129
e-value: 2.4E-23
score: 84.0
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 326..533
coord: 44..265
coord: 169..412
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 314..444
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 165..264
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 30..154
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 451..528

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig669contigL-elsbetiae_contig669:13906..19691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig669.15422.1mRNA_L-elsbetiae_contig669.15422.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig669 13600..19691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig669.15422.1 ID=prot_L-elsbetiae_contig669.15422.1|Name=mRNA_L-elsbetiae_contig669.15422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=579bp
MGYVEQQPAAPFVQDANGIGGVMPVVGAIPPPPAAAAAAAAAAAAATGTT
RVYVGNLSWETEWQDLKDHMRSAGEVVRADVMKDASGRSKGCGIVEYRTP
AEALEAINTLLDTELKGRLIFVREDREAAGGGGAGGGAGGGGAGGAGGGN
QHRGPPPMAGGGGPRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGDVI
RADVMSDQTGRSRGCGIVEFADPDQAGQAIEQLNNSELKGRMIFVREDRE
NGNGGGGGHHGGQHQQMHQQQQQQQQQQMVGQMQMGPMGGFAGQQFAPGP
PMMGQPMGGHMQQMQMHQQQQHQGGGAPMPQATGNRIYVGNLAWTVEWQE
LKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTPL
GGRPIFVREDREQQHPRQRRGGGGGRGGRGEQANGGGGRGGGRGGGGDFA
GRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDGSRRSKGWGTVRFS
TPEEAQTAIQELNGTELGSRQIEVREDSKTGGASNKASNKAAAAAASATT
AAAAPVATTEAAVAAPAVPAAAPISTTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf