prot_L-elsbetiae_contig6689.15419.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6689.15419.1
Unique Nameprot_L-elsbetiae_contig6689.15419.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length211
Homology
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BLAST of mRNA_L-elsbetiae_contig6689.15419.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 3.300e-41
Identity = 80/101 (79.21%), Postives = 92/101 (91.09%), Query Frame = 0 
Query:    1 PKAAWLALFWSEVSLLDVASVPGLGHWPLVPITTGELVSCSLLQQIVRACPSMLNEVKKRGLGVALATVKRTENAADERDEKELQDILAQQRQDQAREANP 101
            PKA+WLALFW+EVSLLDVASVPGLG WPLVPITTGELVSCS+LQQ+VRACPSMLNEVK+RGLGVALA ++R E AADERDE ELQ++LA+Q    A+EA+P
Sbjct: 1165 PKASWLALFWTEVSLLDVASVPGLGSWPLVPITTGELVSCSMLQQVVRACPSMLNEVKQRGLGVALAAMERAEKAADERDENELQELLARQ----AQEADP 1261
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BLAST of mRNA_L-elsbetiae_contig6689.15419.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.750e-32
Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0 
Query:    1 PKAAWLALFWSEVSLLDVASVPGLGHWPLVPITTGELVSCSLLQQIVRACPSMLNEVKKRGLGVALATVKRTE 73
            PKA+WLALFW+EVSLLDVASVPGLG WPLVPITTGELVSCS+LQQ+VRACPSMLNEVKKRGL VALA V+R E
Sbjct: 3124 PKASWLALFWTEVSLLDVASVPGLGSWPLVPITTGELVSCSMLQQVVRACPSMLNEVKKRGLEVALAAVERAE 3196
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BLAST of mRNA_L-elsbetiae_contig6689.15419.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.700e-10
Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    5 WLALFWSEVSLLDVASVPGLGHWPLVPITTGELVSCSLLQQIVRACPSMLNEVKKRGLGVA 65
            W+A FW EV + D A V  L  WPLVPITTGEL SCSL   I RACP  ++   +R L  A
Sbjct: 4421 WVAAFWREVPMSDAALVAALHEWPLVPITTGELASCSLAPSIFRACPGAIHADTQRRLDAA 4481
[Close]
BLAST of mRNA_L-elsbetiae_contig6689.15419.1 vs. uniprot
Match: A0A7S3XNM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNM4_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 3.040e-6
Identity = 31/79 (39.24%), Postives = 40/79 (50.63%), Query Frame = 0 
Query:    1 PKAAWLALFWSEVSLLDVASVPGLGHWPLVPITTGELVSCSLLQQIVRACPSMLNEVKKRGLGVALATVKRTENAADER 79
            P   WL  FW EVSLLD  +V     WPL+P T+GEL+SC      +R C  +++      L  A A   R   A +ER
Sbjct:  122 PSRVWLYKFWQEVSLLDAHAVAAFRAWPLLPTTSGELLSCGSADIGLRLCDQVVDGQLSGRLERAAAAEGRELKAREER 200
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6689.15419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJG4_ECTSI3.300e-4179.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K688_9PHAE1.750e-3287.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YL62_9STRA1.700e-1054.10RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3XNM4_HETAK3.040e-639.24Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.628

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6689contigL-elsbetiae_contig6689:6990..8647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6689.15419.1mRNA_L-elsbetiae_contig6689.15419.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6689 6988..8647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6689.15419.1 ID=prot_L-elsbetiae_contig6689.15419.1|Name=mRNA_L-elsbetiae_contig6689.15419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
PKAAWLALFWSEVSLLDVASVPGLGHWPLVPITTGELVSCSLLQQIVRAC
PSMLNEVKKRGLGVALATVKRTENAADERDEKELQDILAQQRQDQAREAN
PAESDDEGEDEDEDEDDDFLDFADDLEVEEEKGAAGGEAGVSGAGGLGSA
EDELESVEDASPDSSGDEYASTAGSPGQGRRAGYPAGSNAPVAAGTPPGP
PGRPSQSPANV
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