prot_L-elsbetiae_contig668.15409.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig668.15409.1
Unique Nameprot_L-elsbetiae_contig668.15409.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length238
Homology
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BLAST of mRNA_L-elsbetiae_contig668.15409.1 vs. uniprot
Match: D8LGG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG6_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 4.360e-77
Identity = 137/177 (77.40%), Postives = 148/177 (83.62%), Query Frame = 0 
Query:   44 MARIEAEIELEQLQREEDGSAMTARDQVRTVTAGWLVGVVLXXXXXXXXXCLFSPALGFMLVLPIVSGGVIGGLVYSQLRDKMRSLRREPMPGEQXXXXXXXXXXXXXRNGNSEDKEEFLRQLQGRSDPSATYLHIGADNTALPSGSFLRRVALGATHVLVRSALDVTVAAAYAVLG 220
            M RI+AEIELEQLQREE GSAMTAR+QVRTVTAGWLVGV+L  XXXXXXXCLFSPALGFM+VLP VSGGVIGGLVYSQLRDK+RSL R PMP EQ                 SEDK+EFLRQLQGRSDPSATYLH+G D++ LPSGSFLRRVALGATH+LVRSALDVT AAA A+LG
Sbjct:    1 MGRIQAEIELEQLQREESGSAMTARNQVRTVTAGWLVGVILGWXXXXXXXCLFSPALGFMMVLPFVSGGVIGGLVYSQLRDKIRSLSRRPMPMEQEHQQPRG-------RSRSEDKQEFLRQLQGRSDPSATYLHMGTDDSTLPSGSFLRRVALGATHILVRSALDVTAAAACAMLG 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig668.15409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGG6_ECTSI4.360e-7777.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig668contigL-elsbetiae_contig668:10762..14282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig668.15409.1mRNA_L-elsbetiae_contig668.15409.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig668 10721..15101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig668.15409.1 ID=prot_L-elsbetiae_contig668.15409.1|Name=mRNA_L-elsbetiae_contig668.15409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MGASIEEEELTAQRDAAVSVCKGLQDKIRAQAAEYEARTEAAEMARIEAE
IELEQLQREEDGSAMTARDQVRTVTAGWLVGVVLGWAAGLVLGCLFSPAL
GFMLVLPIVSGGVIGGLVYSQLRDKMRSLRREPMPGEQQQQQQQQQQQPG
GRNGNSEDKEEFLRQLQGRSDPSATYLHIGADNTALPSGSFLRRVALGAT
HVLVRSALDVTVAAAYAVLGLGGAGGAGTGEGRGQTR*
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