prot_L-elsbetiae_contig6674.15405.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6674.15405.1
Unique Nameprot_L-elsbetiae_contig6674.15405.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A6H5JI65_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI65_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 4.390e-104
Identity = 166/180 (92.22%), Postives = 174/180 (96.67%), Query Frame = 0
Query:    1 MASAKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            +ASA+ERMDKS+ESVRLNLETLRTGRANPKILDRVVV+CYGAETPLNQVASVKTTSATALLVESYDPTILADIA+AIQEADLG TPNNDG+VIRLNMPPVTEDRRKELAKEAK LGEEGKVAIRNIRREAVD VKKAEKAKNLGKDQSKD QDAIQKLTD TTKTIDEKV+ KEK+ILKV
Sbjct:   72 LASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATALLVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKSLGEEGKVAIRNIRREAVDTVKKAEKAKNLGKDQSKDVQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: B7GAC1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAC1_PHATC)

HSP 1 Score: 201 bits (511), Expect = 2.320e-62
Identity = 104/177 (58.76%), Postives = 138/177 (77.97%), Query Frame = 0
Query:    4 AKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            A +RM KS++SVRLNL+++RTGRA+ +ILDRV VD YG ETPLNQ+A++   SA  L ++ YD T L +I +AI E+DLG T NNDGS+IR+N+P +TEDRRKE+ K  K +GEEGKVA+RNIRR+ +D +KK EK+ ++G+D+ KD QD +QKLTD   K IDE V  KEKE++KV
Sbjct:   49 ASDRMAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLSIDPYDKTSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKVAVRNIRRDGLDTIKKMEKSSDIGEDEMKDGQDTMQKLTDKNVKEIDEVVGAKEKEVMKV 225          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A7S1ZTM1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZTM1_TRICV)

HSP 1 Score: 202 bits (513), Expect = 4.880e-62
Identity = 107/180 (59.44%), Postives = 137/180 (76.11%), Query Frame = 0
Query:    1 MASAKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            M  A++RM K+I SV+ NL+T+RTGRAN  ILDRV VD YGA TPLNQ+A +   S+  L V+ YD + LAD+  AI E+ LG TPNNDG+ IR+N+P +TEDRRKEL K+ K +GEEGKVA+RN+RR+ VDA+KK EKA ++GKD+S D  D IQKLTD + K IDE V+ KEKE++ V
Sbjct:   93 MMDAEDRMSKTISSVKSNLQTIRTGRANAAILDRVEVDYYGAMTPLNQMAGISVPSSQQLQVDPYDKSTLADVEKAIIESGLGLTPNNDGNTIRINIPQLTEDRRKELLKQCKAMGEEGKVAVRNVRRDNVDAIKKLEKASSIGKDESLDGLDEIQKLTDTSVKEIDEIVAKKEKEVMTV 272          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A7S1C109_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C109_9STRA)

HSP 1 Score: 201 bits (512), Expect = 5.770e-62
Identity = 108/177 (61.02%), Postives = 136/177 (76.84%), Query Frame = 0
Query:    4 AKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            AK RM KS + ++ NL+T+RTGRAN  ILDRV VD YG  TPLN +AS+   S++ LLV+ YD T L DI  AI EA LG  PNNDGS IRLN+P +TE+RRKEL K+ K +GEEGKV +RNIRR AV+++KK EKA ++ KDQS DAQ+++QKLTD+T K I+E VS KEKE++KV
Sbjct:   90 AKVRMKKSTDVLQQNLQTIRTGRANAAILDRVTVDYYGEPTPLNSLASISVPSSSQLLVDPYDKTSLGDIERAIVEASLGLNPNNDGSAIRLNIPALTEERRKELMKQVKAMGEEGKVGVRNIRRGAVESIKKLEKASDISKDQSMDAQESVQKLTDSTIKNIEEVVSKKEKEVMKV 266          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A7S2JZ54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ54_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.730e-60
Identity = 103/175 (58.86%), Postives = 134/175 (76.57%), Query Frame = 0
Query:    6 ERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            ERM KS +SV  NL+T+ TGRANP +LDR+  D YGA TP+NQ+AS+   SA+ L ++ YD + L+DI  AI  +DLG TP NDGSVIR+N+P +TE+RRKEL K+ KG+GEEGKVA+RN+RR+ VD +KK EKA  +G+DQSK+ QD IQK+TD   K IDE V+ KEK++ KV
Sbjct:   55 ERMQKSCDSVVRNLQTISTGRANPAMLDRIQADYYGAPTPINQMASISVPSASQLQIDPYDKSSLSDIEKAIIISDLGMTPQNDGSVIRINIPALTEERRKELLKKCKGIGEEGKVAVRNVRRDGVDKIKKLEKASTIGEDQSKEGQDDIQKMTDKYVKDIDEIVAKKEKDVSKV 229          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A7S1TJD3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJD3_9RHOD)

HSP 1 Score: 196 bits (497), Expect = 2.250e-60
Identity = 102/177 (57.63%), Postives = 137/177 (77.40%), Query Frame = 0
Query:    4 AKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            ++ERM KSIE+V  +  T+RTGRANP ILDRV+V  YGAETPL Q+ASV T S+T + ++++D + + DI  AI E+DLG TP+NDG+VIRLN+P +T+DRRKE+ K+ K L EEG+VA+RNIRR+ VD +K  EK+ ++GKD+SK AQD IQKLTD   KT+D  +  KE E++KV
Sbjct:   39 SEERMKKSIEAVGTSFNTIRTGRANPAILDRVMVSYYGAETPLKQLASVSTPSSTVIAIDAFDKSCIKDIERAIMESDLGLTPSNDGNVIRLNIPALTQDRRKEMVKQLKQLAEEGRVALRNIRRDGVDQIKALEKSSDIGKDESKIAQDEIQKLTDKYVKTVDSLLKDKEGEVMKV 215          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A836CN93_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN93_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.390e-60
Identity = 105/173 (60.69%), Postives = 131/173 (75.72%), Query Frame = 0
Query:    8 MDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            M KS++  R NL TLRTGRA+P ILDRV VD YG  TPL  +A+VKT+SAT L+VE YD + L+ I   I E+ +G  PNNDG VIRLN+P VTEDRRKEL KEA+ LGEEGKVA+RNIRR+ V+ +KKAEK+K + +DQSK+    IQK+TD   K +DE V+TKEK+I+ V
Sbjct:    1 MQKSVDKCRENLATLRTGRASPGILDRVFVDYYGTPTPLKGLAAVKTSSATQLMVEPYDRSSLSAIERGILESGVGLNPNNDGQVIRLNIPAVTEDRRKELCKEARALGEEGKVAVRNIRRDVVEVIKKAEKSKEISQDQSKNTSGDIQKITDKYAKMVDEAVATKEKDIMTV 173          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A7S4EEJ6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEJ6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 4.780e-60
Identity = 102/177 (57.63%), Postives = 135/177 (76.27%), Query Frame = 0
Query:    4 AKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            A +RM+KSIESV  N+ T+RTGRA+P ILDRV  D YG ETP+NQ+AS+   SA  L VE +D ++L D+  AI E+D+G TP NDG+VIRLN+P +TEDRRKE+ K+ K +GEEGKVA+RNIRR+AVD++KK EK  ++ +D+SK +QD IQK+TD   K ID  V  KE +++KV
Sbjct:   52 AMDRMEKSIESVMQNMNTIRTGRASPAILDRVKCDYYGTETPINQMASISVPSAQQLTVEPFDKSMLGDVERAIMESDVGLTPMNDGTVIRLNIPSLTEDRRKEMMKQCKAIGEEGKVAVRNIRRKAVDSIKKLEKDSDISEDESKSSQDDIQKMTDEKVKEIDGIVEKKENDVMKV 228          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A1E7F508_9STRA (Ribosome releasing factor n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F508_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.200e-59
Identity = 101/179 (56.42%), Postives = 137/179 (76.54%), Query Frame = 0
Query:    2 ASAKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            A A ++M KSI+S+ LN+ ++RTGRA+P ILDRV    YG ETP++Q+A++   SA  L+V+ +D T L DI  AI +AD+G TP NDGSVIRLN+P +TEDRRKE+ K+ K +GEEGKVAIRNIRR+AV+ +KK EK+ ++G+D+SK AQD IQK+TD   K +D+ V  KEKE++ V
Sbjct:   46 ADATDKMKKSIDSLYLNMNSVRTGRASPAILDRVRAQYYGTETPISQMATISVPSAQQLMVDPFDKTALGDIERAIVDADIGLTPQNDGSVIRLNIPALTEDRRKEMMKQCKAIGEEGKVAIRNIRRKAVETIKKLEKSSDIGEDESKMAQDKIQKMTDKNVKEVDDIVDRKEKEVMTV 224          
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Match: A0A7S2S100_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S100_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.390e-59
Identity = 105/181 (58.01%), Postives = 137/181 (75.69%), Query Frame = 0
Query:    2 ASAKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVASVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPVTEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLG--KDQSKDAQDAIQKLTDATTKTIDEKVSTKEKEILKV 180
            + A+ +M KS+ESV+ NL TLRTGRANP +LDRV VD YG  TPLNQVAS+  +S T+L+V+ YD + L D+  AI E+D+G  P+NDG  IRLN+P +TE+RRKEL K AK LGE+GKVA+RN+RR+AVD++KK  K K+ G  +D  KD+ D+IQKLTD   K +DE V+ KEK+I KV
Sbjct:   60 SEAEVKMKKSVESVQTNLNTLRTGRANPSLLDRVQVDYYGTPTPLNQVASISVSSGTSLIVDPYDKSSLGDVEKAIMESDIGIVPSNDGEKIRLNIPSLTEERRKELMKTAKSLGEDGKVALRNVRRDAVDSIKKLAKDKDAGVSEDSVKDSTDSIQKLTDKYVKEVDEVVAGKEKDISKV 240          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6674.15405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI65_9PHAE4.390e-10492.22RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
B7GAC1_PHATC2.320e-6258.76Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZTM1_TRICV4.880e-6259.44Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1C109_9STRA5.770e-6261.02Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2JZ54_9STRA1.730e-6058.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1TJD3_9RHOD2.250e-6057.63Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A836CN93_9STRA3.390e-6060.69Ribosome recycling factor domain-containing protei... [more]
A0A7S4EEJ6_9STRA4.780e-6057.63Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7F508_9STRA1.200e-5956.42Ribosome releasing factor n=1 Tax=Fragilariopsis c... [more]
A0A7S2S100_9STRA1.390e-5958.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableGENE3D1.10.132.20coord: 7..177
e-value: 1.3E-60
score: 205.7
NoneNo IPR availableGENE3D3.30.1360.40coord: 26..100
e-value: 1.3E-60
score: 205.7
IPR002661Ribosome recycling factorTIGRFAMTIGR00496TIGR00496coord: 5..180
e-value: 2.3E-64
score: 214.2
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 3..179
IPR002661Ribosome recycling factorHAMAPMF_00040RRFcoord: 2..180
score: 23.598
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 18..178
e-value: 7.4E-57
score: 191.8
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 3..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6674contigL-elsbetiae_contig6674:1369..5815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6674.15405.1mRNA_L-elsbetiae_contig6674.15405.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6674 1338..6544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6674.15405.1 ID=prot_L-elsbetiae_contig6674.15405.1|Name=mRNA_L-elsbetiae_contig6674.15405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MASAKERMDKSIESVRLNLETLRTGRANPKILDRVVVDCYGAETPLNQVA
SVKTTSATALLVESYDPTILADIASAIQEADLGFTPNNDGSVIRLNMPPV
TEDRRKELAKEAKGLGEEGKVAIRNIRREAVDAVKKAEKAKNLGKDQSKD
AQDAIQKLTDATTKTIDEKVSTKEKEILKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002661Ribosome_recyc_fac
IPR023584Ribosome_recyc_fac_dom
IPR036191RRF_sf