prot_L-elsbetiae_contig6650.15381.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6650.15381.1
Unique Nameprot_L-elsbetiae_contig6650.15381.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length104
Homology
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: D8LNK8_ECTSI (Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK8_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 5.880e-55
Identity = 91/103 (88.35%), Postives = 92/103 (89.32%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVIDGKHYGIHNFIVPIRGEDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQ 103
            MGRTANHAMVIAQLVIDGK YGIHNFIVPIRG+DH PLPGVR GDIGPKIGFN MDNGF   DRVRIPR NMAMRHQRVDRDG YAS GSKE GKIAYISMMQ
Sbjct:  167 MGRTANHAMVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYASFGSKESGKIAYISMMQ 269          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A6H5K1J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J8_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.900e-54
Identity = 90/107 (84.11%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    1 MGRTANHAMV---IAQLVIDGKHYGIHNFIVPIRGEDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQA 104
            MGRTANHAMV   IAQLVIDGK YGIHNFIVPIRG+DH PLPGVR GDIGPKIGFN MDNGF   DRVRIPR NMAMRHQRVDRDG Y+S GSKE  KIAYISMMQA
Sbjct:  185 MGRTANHAMVRVVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNAMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESSKIAYISMMQA 291          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A835YNL1_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.700e-35
Identity = 68/104 (65.38%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVIDGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQ 103
            +GRTANHAMVIAQLVI  + YGIHNFIVP+R  + H PL GVR GDIGPKIGF  MDNG+ + DRVR+PRANMA R+  VDR G Y   G     KI+YI+MMQ
Sbjct:  179 LGRTANHAMVIAQLVIGDRRYGIHNFIVPLRDVKAHAPLRGVRAGDIGPKIGFTTMDNGYCVFDRVRVPRANMAARYASVDRHGVYTKKGGDS--KISYITMMQ 280          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S3Y646_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y646_HETAK)

HSP 1 Score: 124 bits (312), Expect = 4.330e-32
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVIDGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQ 103
            +G+   HAMVIA+LV  GK YGIHNFIVPIR  E H PLPGV  GDIGPK+GF  +DNG+L LD+VR+PR  MAMR+Q VDR+G Y    S    K++ I+MMQ
Sbjct:  108 LGKVGTHAMVIARLVTGGKDYGIHNFIVPIRDPETHMPLPGVEVGDIGPKMGFLAVDNGYLALDKVRVPRRYMAMRYQTVDRNGRYQRRPSPH-EKVSSIAMMQ 210          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: B7FXZ0_PHATC (Acyl-coenzyme A oxidase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXZ0_PHATC)

HSP 1 Score: 124 bits (311), Expect = 6.620e-31
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVID-GKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTG-SKEGGKIAYISMMQ 103
            +GRTANHAMVIA+L+   GK  G+HNF+VP+R  +DH+ LPGV+ GDIGPKIG+NVMDNGF   D V+IPR NMAMR   VD  G Y+    S    KI+YI+MMQ
Sbjct:  196 LGRTANHAMVIARLIDGHGKDQGMHNFLVPLRSMKDHKLLPGVKSGDIGPKIGYNVMDNGFAQFDNVKIPRRNMAMRFAHVDERGRYSKKSVSAAASKISYITMMQ 301          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A1E7F3F0_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3F0_9STRA)

HSP 1 Score: 124 bits (310), Expect = 9.020e-31
Identity = 65/106 (61.32%), Postives = 76/106 (71.70%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVI-DGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYAS-TGSKEGGKIAYISMMQ 103
            +GRTANHAMVIAQL+  DG H GIHNF+V +R  EDH  LPGV+ GDIGPKIG+N MDNGF     V IPR NMAMR   VD++G Y+    S    K+AYI+MMQ
Sbjct:  194 LGRTANHAMVIAQLIDGDGIHRGIHNFLVQLRSMEDHTLLPGVKTGDIGPKIGYNTMDNGFAYFKNVMIPRRNMAMRFASVDKNGRYSKKVMSDAASKVAYITMMQ 299          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S1TVA0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVA0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.010e-30
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVIDGKHYGIHNFIVPIRGED-HRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGG----KIAYISMMQ 103
            +GRTAN AMVIA+L+IDG  +G+ NF+VPIR  D H  LPGV  GDIGPK+G+N MDNGFL  + V+IPR NMAMR+  VDR G + +           K+ Y++MMQ
Sbjct:  143 LGRTANTAMVIARLIIDGADHGVQNFLVPIRDRDTHAALPGVTVGDIGPKLGYNNMDNGFLRFEHVKIPRMNMAMRYASVDRSGGFTTKAXXXXXXADDKVPYVTMMQ 250          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: B8CA48_THAPS (Acyl-coa oxidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA48_THAPS)

HSP 1 Score: 123 bits (308), Expect = 1.640e-30
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVI-DGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEG---GKIAYISMMQ 103
            +G+TANHAMVIA+L+   G+  GIHNF+VP+R  EDH  LPGV  GDIGPKIG+N MDNG+   D VRIPR NMAMR   VD +G Y   G  +G    K+AYI+MMQ
Sbjct:  183 LGKTANHAMVIARLIDGSGRDRGIHNFVVPLRSMEDHTLLPGVDTGDIGPKIGYNNMDNGWASFDNVRIPRRNMAMRFATVDEEGKYGRIGGGDGDAASKVAYITMMQ 290          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S3DPW3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPW3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.530e-30
Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVIDGK--HYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYAS-TGSKEGGKIAYISMMQ 103
            +GRTANHAMVIA L IDG+  + GIHNF+VP+R  +DH+ LPGV  GDIGPKIG+NVMDNGF   ++V IPR NMAMR   VD  G+Y   T S    K+AYI+MMQ
Sbjct:   35 LGRTANHAMVIANL-IDGQGVNRGIHNFLVPLRSMKDHKLLPGVTTGDIGPKIGYNVMDNGFAKFEKVEIPRRNMAMRFVSVDEQGNYKKKTVSDASAKVAYITMMQ 140          
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S2LSD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LSD9_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.270e-30
Identity = 66/115 (57.39%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    1 MGRTANHAMVIAQLVI-DGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSK--EGG--------KIAYISMMQ 103
            +G+TANHAMVIA+L+   G  +GIHNF+VP+R  EDH  LPGV  GDIGPKIG+N MDNGF   + VRIPR NMAMR   VD +G Y   G+K  +GG        K+AYI+MMQ
Sbjct:  237 LGKTANHAMVIARLIDGSGVDHGIHNFLVPLRSMEDHTLLPGVETGDIGPKIGYNNMDNGFARFENVRIPRRNMAMRFAVVDEEGVYEKVGAKNKKGGSGSGDAASKVAYITMMQ 351          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK8_ECTSI5.880e-5588.35Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ecto... [more]
A0A6H5K1J8_9PHAE1.900e-5484.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNL1_9STRA4.700e-3565.38Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y646_HETAK4.330e-3260.58Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B7FXZ0_PHATC6.620e-3160.38Acyl-coenzyme A oxidase n=1 Tax=Phaeodactylum tric... [more]
A0A1E7F3F0_9STRA9.020e-3161.32Acyl-coenzyme A oxidase n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1TVA0_9STRA1.010e-3054.63Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
B8CA48_THAPS1.640e-3059.26Acyl-coa oxidase (Fragment) n=1 Tax=Thalassiosira ... [more]
A0A7S3DPW3_9STRA2.530e-3061.68Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2LSD9_9STRA5.270e-3057.39Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.110.10coord: 1..91
e-value: 1.3E-29
score: 104.8
NoneNo IPR availablePANTHERPTHR10909:SF250PEROXISOMAL ACYL-COENZYME A OXIDASE 1coord: 1..103
NoneNo IPR availablePANTHERPTHR10909ELECTRON TRANSPORT OXIDOREDUCTASEcoord: 1..103
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilySUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 2..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6650contigL-elsbetiae_contig6650:5648..10417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6650.15381.1mRNA_L-elsbetiae_contig6650.15381.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6650 5648..10429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6650.15381.1 ID=prot_L-elsbetiae_contig6650.15381.1|Name=mRNA_L-elsbetiae_contig6650.15381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp
MGRTANHAMVIAQLVIDGKHYGIHNFIVPIRGEDHRPLPGVRCGDIGPKI
GFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYIS
MMQA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009100AcylCoA_DH/oxidase_NM_dom