mRNA_L-elsbetiae_contig6650.15381.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: D8LNK8_ECTSI (Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK8_ECTSI) HSP 1 Score: 199 bits (505), Expect = 3.730e-59 Identity = 95/107 (88.79%), Postives = 96/107 (89.72%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVIDGKHYGIHNFIVPIRGEDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQ 321 WPGTMGRTANHAMVIAQLVIDGK YGIHNFIVPIRG+DH PLPGVR GDIGPKIGFN MDNGF DRVRIPR NMAMRHQRVDRDG YAS GSKE GKIAYISMMQ Sbjct: 163 WPGTMGRTANHAMVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYASFGSKESGKIAYISMMQ 269
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A6H5K1J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J8_9PHAE) HSP 1 Score: 191 bits (486), Expect = 9.410e-59 Identity = 94/111 (84.68%), Postives = 96/111 (86.49%), Query Frame = 1 Query: 1 WPGTMGRTANHAMV---IAQLVIDGKHYGIHNFIVPIRGEDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQA 324 WPGTMGRTANHAMV IAQLVIDGK YGIHNFIVPIRG+DH PLPGVR GDIGPKIGFN MDNGF DRVRIPR NMAMRHQRVDRDG Y+S GSKE KIAYISMMQA Sbjct: 181 WPGTMGRTANHAMVRVVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNAMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESSKIAYISMMQA 291
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A835YNL1_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL1_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.190e-39 Identity = 72/108 (66.67%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVIDGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQ 321 WPGT+GRTANHAMVIAQLVI + YGIHNFIVP+R + H PL GVR GDIGPKIGF MDNG+ + DRVR+PRANMA R+ VDR G Y G KI+YI+MMQ Sbjct: 175 WPGTLGRTANHAMVIAQLVIGDRRYGIHNFIVPLRDVKAHAPLRGVRAGDIGPKIGFTTMDNGYCVFDRVRVPRANMAARYASVDRHGVYTKKGGDS--KISYITMMQ 280
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S3Y646_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y646_HETAK) HSP 1 Score: 133 bits (334), Expect = 3.020e-35 Identity = 66/108 (61.11%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVIDGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGGKIAYISMMQ 321 WPG +G+ HAMVIA+LV GK YGIHNFIVPIR E H PLPGV GDIGPK+GF +DNG+L LD+VR+PR MAMR+Q VDR+G Y S K++ I+MMQ Sbjct: 104 WPGGLGKVGTHAMVIARLVTGGKDYGIHNFIVPIRDPETHMPLPGVEVGDIGPKMGFLAVDNGYLALDKVRVPRRYMAMRYQTVDRNGRYQRRPSPH-EKVSSIAMMQ 210
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: B7FXZ0_PHATC (Acyl-coenzyme A oxidase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXZ0_PHATC) HSP 1 Score: 135 bits (340), Expect = 8.450e-35 Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVID-GKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTG-SKEGGKIAYISMMQ 321 WPGT+GRTANHAMVIA+L+ GK G+HNF+VP+R +DH+ LPGV+ GDIGPKIG+NVMDNGF D V+IPR NMAMR VD G Y+ S KI+YI+MMQ Sbjct: 192 WPGTLGRTANHAMVIARLIDGHGKDQGMHNFLVPLRSMKDHKLLPGVKSGDIGPKIGYNVMDNGFAQFDNVKIPRRNMAMRFAHVDERGRYSKKSVSAAASKISYITMMQ 301
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A1E7F3F0_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3F0_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.150e-34 Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVI-DGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYAS-TGSKEGGKIAYISMMQ 321 WPGT+GRTANHAMVIAQL+ DG H GIHNF+V +R EDH LPGV+ GDIGPKIG+N MDNGF V IPR NMAMR VD++G Y+ S K+AYI+MMQ Sbjct: 190 WPGTLGRTANHAMVIAQLIDGDGIHRGIHNFLVQLRSMEDHTLLPGVKTGDIGPKIGYNTMDNGFAYFKNVMIPRRNMAMRFASVDKNGRYSKKVMSDAASKVAYITMMQ 299
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: B8CA48_THAPS (Acyl-coa oxidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA48_THAPS) HSP 1 Score: 134 bits (337), Expect = 2.050e-34 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVI-DGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEG---GKIAYISMMQ 321 WPGT+G+TANHAMVIA+L+ G+ GIHNF+VP+R EDH LPGV GDIGPKIG+N MDNG+ D VRIPR NMAMR VD +G Y G +G K+AYI+MMQ Sbjct: 179 WPGTLGKTANHAMVIARLIDGSGRDRGIHNFVVPLRSMEDHTLLPGVDTGDIGPKIGYNNMDNGWASFDNVRIPRRNMAMRFATVDEEGKYGRIGGGDGDAASKVAYITMMQ 290
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S1TVA0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVA0_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.100e-34 Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVIDGKHYGIHNFIVPIRGED-HRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSKEGG----KIAYISMMQ 321 WPG++GRTAN AMVIA+L+IDG +G+ NF+VPIR D H LPGV GDIGPK+G+N MDNGFL + V+IPR NMAMR+ VDR G + + K+ Y++MMQ Sbjct: 139 WPGSLGRTANTAMVIARLIIDGADHGVQNFLVPIRDRDTHAALPGVTVGDIGPKLGYNNMDNGFLRFEHVKIPRMNMAMRYASVDRSGGFTTKAXXXXXXADDKVPYVTMMQ 250
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S3DPW3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPW3_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.430e-34 Identity = 70/111 (63.06%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVIDGK--HYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYAS-TGSKEGGKIAYISMMQ 321 WPGT+GRTANHAMVIA L IDG+ + GIHNF+VP+R +DH+ LPGV GDIGPKIG+NVMDNGF ++V IPR NMAMR VD G+Y T S K+AYI+MMQ Sbjct: 31 WPGTLGRTANHAMVIANL-IDGQGVNRGIHNFLVPLRSMKDHKLLPGVTTGDIGPKIGYNVMDNGFAKFEKVEIPRRNMAMRFVSVDEQGNYKKKTVSDASAKVAYITMMQ 140
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Match: A0A7S2LSD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LSD9_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.320e-34 Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 1 WPGTMGRTANHAMVIAQLVI-DGKHYGIHNFIVPIRG-EDHRPLPGVRCGDIGPKIGFNVMDNGFLILDRVRIPRANMAMRHQRVDRDGHYASTGSK--EGG--------KIAYISMMQ 321 WPGT+G+TANHAMVIA+L+ G +GIHNF+VP+R EDH LPGV GDIGPKIG+N MDNGF + VRIPR NMAMR VD +G Y G+K +GG K+AYI+MMQ Sbjct: 233 WPGTLGKTANHAMVIARLIDGSGVDHGIHNFLVPLRSMEDHTLLPGVETGDIGPKIGYNNMDNGFARFENVRIPRRNMAMRFAVVDEEGVYEKVGAKNKKGGSGSGDAASKVAYITMMQ 351 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6650.15381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6650.15381.1 >prot_L-elsbetiae_contig6650.15381.1 ID=prot_L-elsbetiae_contig6650.15381.1|Name=mRNA_L-elsbetiae_contig6650.15381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp MGRTANHAMVIAQLVIDGKHYGIHNFIVPIRGEDHRPLPGVRCGDIGPKIback to top mRNA from alignment at L-elsbetiae_contig6650:5648..10429- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6650.15381.1 ID=mRNA_L-elsbetiae_contig6650.15381.1|Name=mRNA_L-elsbetiae_contig6650.15381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4782bp|location=Sequence derived from alignment at L-elsbetiae_contig6650:5648..10429- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6650:5648..10429- >mRNA_L-elsbetiae_contig6650.15381.1 ID=mRNA_L-elsbetiae_contig6650.15381.1|Name=mRNA_L-elsbetiae_contig6650.15381.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig6650:5648..10429- (Laminarionema elsbetiae ELsaHSoW15)back to top |