prot_L-elsbetiae_contig650.15187.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig650.15187.1
Unique Nameprot_L-elsbetiae_contig650.15187.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 2.130e-66
Identity = 115/159 (72.33%), Postives = 137/159 (86.16%), Query Frame = 0
Query:    1 MLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGTGGAP 159
            M     + TSR F+ YL  KGASGEV FD+E +T+G+TYQKDSS++ASQC DV+ LSGGERSFATLA+LLALG+++ECPFRVMDEFDVFMDA+SRN+AI+QVI+FA  D++RQFILITPQDLSSV A+D CKIIKM+ PR+GDHNQ TLEE LG GGAP
Sbjct: 1109 MRDFVARQTSRLFDAYLQEKGASGEVRFDNECQTLGLTYQKDSSDNASQCSDVKLLSGGERSFATLALLLALGQSHECPFRVMDEFDVFMDAMSRNIAIKQVIEFAKRDSSRQFILITPQDLSSVTASDACKIIKMQPPRKGDHNQTTLEETLGGGGAP 1267          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 5.700e-52
Identity = 92/147 (62.59%), Postives = 118/147 (80.27%), Query Frame = 0
Query:    9 TSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGT 155
            T+R F + L  K A GEV F+H+ KT+G++YQ  + ND S+C DVRQLSGGE+S+ATLA+LL+LG  ++CPFRVMDEFDVFMDAVSR+ AI +V+ FA  +  +QFI ITPQDLSSV ++DTCKIIKM+ PR+GDHNQ TL E+ G+
Sbjct: 1018 TARMFGDILAEKEAHGEVKFNHKKKTLGLSYQSQAHNDTSKCRDVRQLSGGEKSYATLALLLSLGAHHDCPFRVMDEFDVFMDAVSRDHAILEVLKFAKRNKDKQFIFITPQDLSSVTSSDTCKIIKMQPPRKGDHNQTTLTESFGS 1164          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: F0YEV6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEV6_AURAN)

HSP 1 Score: 161 bits (407), Expect = 2.370e-47
Identity = 83/151 (54.97%), Postives = 114/151 (75.50%), Query Frame = 0
Query:    7 KTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGTGG 157
            + ++R+F+  L  KG++G++ F+H++KT+G+TYQKD+++DA+  +++  LSGGERSF+TLAML++LG   ECPFRVMDEFDVFMD VSR VA+++++D A     RQFI ITPQDLSS+  +D  KI KM  P RG   Q TLEEA  T G
Sbjct:   45 RRSNREFDNILQAKGSAGKLDFEHKEKTLGLTYQKDNADDANIINNITSLSGGERSFSTLAMLISLGATIECPFRVMDEFDVFMDQVSRKVAMKELVDMAKKMENRQFIFITPQDLSSLPQSDILKIFKMNPPIRG---QRTLEEAFATQG 192          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A8J2X4G0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4G0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.810e-41
Identity = 80/147 (54.42%), Postives = 110/147 (74.83%), Query Frame = 0
Query:    4 HAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLE 150
            H  + ++R+F++ L  KG+SG + FDHED T+ MTYQKD+ ++ +Q D+++ LSGGERSF+TLAML++LG   ECPFRVMDEFDVFMD VSR VA+Q+++D A     RQF+ ITPQDLSS+  ++  K+ K+ AP RG   Q TL+
Sbjct: 1027 HICRMSNREFDKILQKKGSSGALRFDHEDATLKMTYQKDNQDETTQIDNIQSLSGGERSFSTLAMLVSLGATIECPFRVMDEFDVFMDQVSRKVAMQELVDMAREMPNRQFVFITPQDLSSLPQSNHLKVFKLNAPIRG---QQTLD 1170          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7R9VE37_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE37_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.630e-40
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 0
Query:    4 HAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEAL 153
            + V+TT+  F++ L  KG++G++ FDHE++T+ +  QKD+SN+ SQ  DV+ LSGGERSF TLA+LLALG + E PFRVMDEFDVF+D V+R +A+  ++  A     RQFI ITPQDLS++      KII+MK P R   N    ++ L
Sbjct:   24 YLVETTNISFDQMLNKKGSAGQLDFDHENQTLNLIVQKDNSNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVSAAKSLEHRQFIFITPQDLSNLTTDPMLKIIRMKPPAR---NSTAAQQTL 170          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S2C434_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C434_9STRA)

HSP 1 Score: 139 bits (349), Expect = 9.360e-39
Identity = 76/145 (52.41%), Postives = 102/145 (70.34%), Query Frame = 0
Query:    9 TSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEAL 153
            T+ KF++ L  KG SG+V FD++ KT+ +  QKD+ +  SQ  D + LSGGERS+ TL++L++LG   ECPFRVMDEFDVFMDAVSR  A++ +I+     A RQFI ITPQD+SSV  +   KI +M+ P R +  Q TLEEA+
Sbjct:   34 TNSKFDQTLNAKGHSGQVVFDYDKKTLSVVVQKDNRDSQSQITDPKLLSGGERSYVTLSLLISLGECIECPFRVMDEFDVFMDAVSRKKALETLIETGKKYAHRQFIFITPQDISSVTPSPMVKIHRMRPPGRLN-GQQTLEEAM 177          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S1GII4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GII4_CYCTE)

HSP 1 Score: 136 bits (343), Expect = 2.300e-38
Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 0
Query:   20 KGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEAL 153
            KG+SGE+ FDH++ T+ +  QKDS ND SQ DDV+ LSGGERS+ TL++LLALG   E PFRVMDEFDVF+DAV+R +A++ +I+ A     RQFI ITPQDLSS+      KI  MKAP R    + T ++ L
Sbjct:    5 KGSSGELKFDHKEGTLDLVVQKDS-NDDSQTDDVKALSGGERSYTTLSLLLALGERLETPFRVMDEFDVFLDAVARRLALRNLIEVAKHMENRQFIFITPQDLSSLTPDPKLKIHFMKAPERNASVEATTQQTL 137          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S2WV71_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV71_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.790e-37
Identity = 77/144 (53.47%), Postives = 98/144 (68.06%), Query Frame = 0
Query:    9 TSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEA 152
            T+ +F + L  KG +G V  DH+D+T+  + QKD+ +  SQ + V+ LSGGERS+ATL+ L+ALG A ECPFRVMDEFDVFMD VSR VA+  +I+   +   RQFILITPQDLSSV      KI K+  P+R    Q TLE A
Sbjct:  209 TNTRFEQTLQRKGQTGRVQMDHKDRTLEFSVQKDNRDSMSQIESVKLLSGGERSYATLSFLIALGDALECPFRVMDEFDVFMDQVSRRVALDLLIEQGRICRNRQFILITPQDLSSVTPAVDVKIFKLPDPKRTLAGQQTLEFA 352          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S2UR98_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR98_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.180e-36
Identity = 76/152 (50.00%), Postives = 100/152 (65.79%), Query Frame = 0
Query:    4 HAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGT 155
            H  +TTS  F+  L  KG+SG++ FDH D+ + +T QKD++N+ SQ  DV+ LSGGERSF TL++LLALG   E PFR+MDEFDVF+D VSR +A+  ++  A     RQFI ITPQDLS +      KIIKMK P R       +++ L T
Sbjct: 1009 HLAETTSNTFDVMLNKKGSSGQLDFDHGDRELNLTVQKDNTNEMSQTKDVKALSGGERSFTTLSLLLALGENLETPFRIMDEFDVFLDPVSRKIALDTMVSVAKDMEHRQFIFITPQDLSGLTTDTKLKIIKMKQPIRSTMVGGPMQQTLDT 1160          
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S4NJE4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJE4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.380e-36
Identity = 75/147 (51.02%), Postives = 104/147 (70.75%), Query Frame = 0
Query:    4 HAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAP-RRGDHNQVTL 149
            H V+TT+  F++ L  KG+SG++ F+H+D ++ +  QKD++N+ SQ  DV+ LSGGERSF TLA+LLALG + E PFRVMDEFDVF+D V+R +A+  ++  A     RQFI ITPQDLS++      KII+MK P R+   +Q TL
Sbjct: 1152 HLVETTNNSFDQMLNKKGSSGQLEFNHDDHSLNLIVQKDNTNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVTAAKSLEHRQFIFITPQDLSNLKTDPMLKIIRMKPPARQSSASQQTL 1298          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI2.130e-6672.33Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI5.700e-5262.59Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
F0YEV6_AURAN2.370e-4754.97Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2X4G0_9STRA1.810e-4154.42Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9VE37_9STRA2.630e-4050.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2C434_9STRA9.360e-3952.41Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1GII4_CYCTE2.300e-3855.22Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2WV71_9STRA2.790e-3753.47Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2UR98_9STRA3.180e-3650.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4NJE4_9STRA4.380e-3651.02Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 55..131
e-value: 9.2E-11
score: 41.6
NoneNo IPR availableGENE3D3.40.50.300coord: 2..148
e-value: 1.7E-20
score: 76.0
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 3..145
IPR027132Structural maintenance of chromosomes protein 6PANTHERPTHR19306:SF6STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6coord: 3..145
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig650contigL-elsbetiae_contig650:15570..18460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig650.15187.1mRNA_L-elsbetiae_contig650.15187.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig650 15558..19085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig650.15187.1 ID=prot_L-elsbetiae_contig650.15187.1|Name=mRNA_L-elsbetiae_contig650.15187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQC
DDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQ
QVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLE
EALGTGGAPSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027132SMC6
IPR027417P-loop_NTPase