mRNA_L-elsbetiae_contig650.15187.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig650.15187.1
Unique NamemRNA_L-elsbetiae_contig650.15187.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.980e-65
Identity = 117/163 (71.78%), Postives = 140/163 (85.89%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGTGGAP 489
            RW+ M     + TSR F+ YL  KGASGEV FD+E +T+G+TYQKDSS++ASQC DV+ LSGGERSFATLA+LLALG+++ECPFRVMDEFDVFMDA+SRN+AI+QVI+FA  D++RQFILITPQDLSSV A+D CKIIKM+ PR+GDHNQ TLEE LG GGAP
Sbjct: 1105 RWRQMRDFVARQTSRLFDAYLQEKGASGEVRFDNECQTLGLTYQKDSSDNASQCSDVKLLSGGERSFATLALLLALGQSHECPFRVMDEFDVFMDAMSRNIAIKQVIEFAKRDSSRQFILITPQDLSSVTASDACKIIKMQPPRKGDHNQTTLEETLGGGGAP 1267
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.700e-49
Identity = 94/159 (59.12%), Postives = 121/159 (76.10%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGT 477
            +WK         T+R F + L  K A GEV F+H+ KT+G++YQ  + ND S+C DVRQLSGGE+S+ATLA+LL+LG  ++CPFRVMDEFDVFMDAVSR+ AI +V+ FA  +  +QFI ITPQDLSSV ++DTCKIIKM+ PR+GDHNQ TL E+ G+
Sbjct: 1006 KWKTFRDVIPTWTARMFGDILAEKEAHGEVKFNHKKKTLGLSYQSQAHNDTSKCRDVRQLSGGEKSYATLALLLSLGAHHDCPFRVMDEFDVFMDAVSRDHAILEVLKFAKRNKDKQFIFITPQDLSSVTSSDTCKIIKMQPPRKGDHNQTTLTESFGS 1164
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: F0YEV6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEV6_AURAN)

HSP 1 Score: 163 bits (412), Expect = 3.120e-45
Identity = 85/161 (52.80%), Postives = 118/161 (73.29%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEALGTGG 483
            R K +  +  + ++R+F+  L  KG++G++ F+H++KT+G+TYQKD+++DA+  +++  LSGGERSF+TLAML++LG   ECPFRVMDEFDVFMD VSR VA+++++D A     RQFI ITPQDLSS+  +D  KI KM  P RG   Q TLEEA  T G
Sbjct:   35 RLKRIRQYICRRSNREFDNILQAKGSAGKLDFEHKEKTLGLTYQKDNADDANIINNITSLSGGERSFSTLAMLISLGATIECPFRVMDEFDVFMDQVSRKVAMKELVDMAKKMENRQFIFITPQDLSSLPQSDILKIFKMNPPIRG---QRTLEEAFATQG 192
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7R9VE37_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE37_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.580e-39
Identity = 77/157 (49.04%), Postives = 107/157 (68.15%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEAL 471
            RW+    + V+TT+  F++ L  KG++G++ FDHE++T+ +  QKD+SN+ SQ  DV+ LSGGERSF TLA+LLALG + E PFRVMDEFDVF+D V+R +A+  ++  A     RQFI ITPQDLS++      KII+MK P R   N    ++ L
Sbjct:   17 RWREFRGYLVETTNISFDQMLNKKGSAGQLDFDHENQTLNLIVQKDNSNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVSAAKSLEHRQFIFITPQDLSNLTTDPMLKIIRMKPPAR---NSTAAQQTL 170
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A8J2X4G0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4G0_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.780e-39
Identity = 81/154 (52.60%), Postives = 113/154 (73.38%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLE 462
            R + +  H  + ++R+F++ L  KG+SG + FDHED T+ MTYQKD+ ++ +Q D+++ LSGGERSF+TLAML++LG   ECPFRVMDEFDVFMD VSR VA+Q+++D A     RQF+ ITPQDLSS+  ++  K+ K+ AP RG   Q TL+
Sbjct: 1020 RLRRIRKHICRMSNREFDKILQKKGSSGALRFDHEDATLKMTYQKDNQDETTQIDNIQSLSGGERSFSTLAMLVSLGATIECPFRVMDEFDVFMDQVSRKVAMQELVDMAREMPNRQFVFITPQDLSSLPQSNHLKVFKLNAPIRG---QQTLD 1170
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S2C434_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C434_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.830e-37
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEAL 471
            +W+ +       T+ KF++ L  KG SG+V FD++ KT+ +  QKD+ +  SQ  D + LSGGERS+ TL++L++LG   ECPFRVMDEFDVFMDAVSR  A++ +I+     A RQFI ITPQD+SSV  +   KI +M+ P R +  Q TLEEA+
Sbjct:   22 KWQKLRKTVANLTNSKFDQTLNAKGHSGQVVFDYDKKTLSVVVQKDNRDSQSQITDPKLLSGGERSYVTLSLLISLGECIECPFRVMDEFDVFMDAVSRKKALETLIETGKKYAHRQFIFITPQDISSVTPSPMVKIHRMRPPGRLN-GQQTLEEAM 177
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S2WV71_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV71_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.760e-36
Identity = 79/156 (50.64%), Postives = 102/156 (65.38%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEA 468
            +WK       + T+ +F + L  KG +G V  DH+D+T+  + QKD+ +  SQ + V+ LSGGERS+ATL+ L+ALG A ECPFRVMDEFDVFMD VSR VA+  +I+   +   RQFILITPQDLSSV      KI K+  P+R    Q TLE A
Sbjct:  197 KWKKFRKTITELTNTRFEQTLQRKGQTGRVQMDHKDRTLEFSVQKDNRDSMSQIESVKLLSGGERSYATLSFLIALGDALECPFRVMDEFDVFMDQVSRRVALDLLIEQGRICRNRQFILITPQDLSSVTPAVDVKIFKLPDPKRTLAGQQTLEFA 352
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S1GII4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GII4_CYCTE)

HSP 1 Score: 136 bits (343), Expect = 9.880e-36
Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 1 
Query:   70 KGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLEEAL 471
            KG+SGE+ FDH++ T+ +  QKDS ND SQ DDV+ LSGGERS+ TL++LLALG   E PFRVMDEFDVF+DAV+R +A++ +I+ A     RQFI ITPQDLSS+      KI  MKAP R    + T ++ L
Sbjct:    5 KGSSGELKFDHKEGTLDLVVQKDS-NDDSQTDDVKALSGGERSYTTLSLLLALGERLETPFRVMDEFDVFLDAVARRLALRNLIEVAKHMENRQFIFITPQDLSSLTPDPKLKIHFMKAPERNASVEATTQQTL 137
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S4NJE4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJE4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.150e-35
Identity = 77/154 (50.00%), Postives = 106/154 (68.83%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAP-RRGDHNQVTL 459
            RW     H V+TT+  F++ L  KG+SG++ F+H+D ++ +  QKD++N+ SQ  DV+ LSGGERSF TLA+LLALG + E PFRVMDEFDVF+D V+R +A+  ++  A     RQFI ITPQDLS++      KII+MK P R+   +Q TL
Sbjct: 1145 RWMEFRAHLVETTNNSFDQMLNKKGSSGQLEFNHDDHSLNLIVQKDNTNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVTAAKSLEHRQFIFITPQDLSNLKTDPMLKIIRMKPPARQSSASQQTL 1298
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BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Match: A0A7S1W016_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1W016_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.540e-34
Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 1 
Query:    1 RWKHMLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQCDDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQQVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRR---GDHNQVTLE 462
            RWK    H   TT+  F+E L  KG+SG++ F HED+ + +  QKD++N+ SQ  DV+ LSGGERSF TL++LLALG + E PFRVMDEFDVF+D VSR +A+  ++  A     RQFI ITPQDLSS+      KI K+K P R   G  +Q TL+
Sbjct:  894 RWKLFRAHIAFTTNITFDEMLNKKGSSGQIEFLHEDRRLKLVVQKDNTNEMSQTKDVKALSGGERSFTTLSLLLALGESLETPFRVMDEFDVFLDPVSRKIALDTMVAVAKELEHRQFIFITPQDLSSLKPDRMLKIFKLKPPERNSIGGPSQQTLD 1050
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig650.15187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI1.980e-6571.78Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI2.700e-4959.12Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
F0YEV6_AURAN3.120e-4552.80Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7R9VE37_9STRA1.580e-3949.04Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J2X4G0_9STRA7.780e-3952.60Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2C434_9STRA2.830e-3749.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WV71_9STRA4.760e-3650.64Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1GII4_CYCTE9.880e-3655.22Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4NJE4_9STRA7.150e-3550.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1W016_9STRA5.540e-3450.96Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig650contigL-elsbetiae_contig650:15558..19085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score230.3
Seed ortholog evalue6.3e-58
Seed eggNOG ortholog2880.D7G4M2
Preferred nameSMC6
KEGG koko:K12614,ko:K15014
KEGG TC2.A.57.1
KEGG Pathwayko03018,map03018
KEGG ModuleM00395
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000793,GO:0000794,GO:0000803,GO:0001674,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007568,GO:0007569,GO:0008094,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0014074,GO:0016043,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019899,GO:0022402,GO:0030915,GO:0031000,GO:0031625,GO:0031974,GO:0031981,GO:0032200,GO:0032502,GO:0032991,GO:0033554,GO:0033676,GO:0034641,GO:0035061,GO:0035861,GO:0036270,GO:0042221,GO:0042493,GO:0042585,GO:0042592,GO:0042623,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044260,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048518,GO:0048522,GO:0048869,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051276,GO:0051304,GO:0051640,GO:0051641,GO:0051716,GO:0051983,GO:0051984,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071139,GO:0071704,GO:0071840,GO:0090304,GO:0090398,GO:0090734,GO:0097159,GO:0097240,GO:0098687,GO:0106068,GO:1901360,GO:1901363,GO:1901698,GO:1902494,GO:1990234,GO:1990683
EggNOG free text desc.double-strand break repair via homologous recombination
EggNOG OGsCOG1196@1,KOG0250@2759
EC3.6.4.13
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03019,ko03036
Exons4
Model size1123
Cds size486
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig650.15187.1prot_L-elsbetiae_contig650.15187.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig650 15570..18460 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.9467194-UTR-L-elsbetiae_contig650:15557..155691622816717.9467194-UTR-L-elsbetiae_contig650:15557..15569Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig650 15558..15569 +
1691683762.4842114-UTR-L-elsbetiae_contig650:15557..155691691683762.4842114-UTR-L-elsbetiae_contig650:15557..15569Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig650 15558..15569 +
1622816718.003335-UTR-L-elsbetiae_contig650:18460..190851622816718.003335-UTR-L-elsbetiae_contig650:18460..19085Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig650 18461..19085 +
1691683762.535344-UTR-L-elsbetiae_contig650:18460..190851691683762.535344-UTR-L-elsbetiae_contig650:18460..19085Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig650 18461..19085 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.9606183-CDS-L-elsbetiae_contig650:15569..156401622816717.9606183-CDS-L-elsbetiae_contig650:15569..15640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 15570..15640 +
1691683762.4970446-CDS-L-elsbetiae_contig650:15569..156401691683762.4970446-CDS-L-elsbetiae_contig650:15569..15640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 15570..15640 +
1622816717.9703133-CDS-L-elsbetiae_contig650:16271..164421622816717.9703133-CDS-L-elsbetiae_contig650:16271..16442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 16272..16442 +
1691683762.5081012-CDS-L-elsbetiae_contig650:16271..164421691683762.5081012-CDS-L-elsbetiae_contig650:16271..16442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 16272..16442 +
1622816717.9818306-CDS-L-elsbetiae_contig650:17093..172111622816717.9818306-CDS-L-elsbetiae_contig650:17093..17211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 17094..17211 +
1691683762.5172749-CDS-L-elsbetiae_contig650:17093..172111691683762.5172749-CDS-L-elsbetiae_contig650:17093..17211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 17094..17211 +
1622816717.9933908-CDS-L-elsbetiae_contig650:18334..184601622816717.9933908-CDS-L-elsbetiae_contig650:18334..18460Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 18335..18460 +
1691683762.5264738-CDS-L-elsbetiae_contig650:18334..184601691683762.5264738-CDS-L-elsbetiae_contig650:18334..18460Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig650 18335..18460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig650.15187.1

>prot_L-elsbetiae_contig650.15187.1 ID=prot_L-elsbetiae_contig650.15187.1|Name=mRNA_L-elsbetiae_contig650.15187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MLTHAVKTTSRKFNEYLLVKGASGEVSFDHEDKTMGMTYQKDSSNDASQC
DDVRQLSGGERSFATLAMLLALGRANECPFRVMDEFDVFMDAVSRNVAIQ
QVIDFAALDATRQFILITPQDLSSVIATDTCKIIKMKAPRRGDHNQVTLE
EALGTGGAPSS*
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mRNA from alignment at L-elsbetiae_contig650:15558..19085+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig650.15187.1 ID=mRNA_L-elsbetiae_contig650.15187.1|Name=mRNA_L-elsbetiae_contig650.15187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3528bp|location=Sequence derived from alignment at L-elsbetiae_contig650:15558..19085+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTGGAAACACATGCTGACGCACGCGGTGAAGACAACGAGCCGCAAGTT
CAACGAGTACCTACTAGTGAAGGGCGCATCAGGGTAACCCATACATAGGC
CGTACCTAAATAAATAGCGTGGCGCATGACATTTAAAGCCTCGAATTAAT
TCCTTTTTTTTTTGGCGCAATTTGTGTACACGAGTCTTATGTACCTATAT
GTACGTAAATGGGGGCTCGAGCAAGTGGGGTTGCCACTAGTTGGGTTTTG
CCGAAGGCGCCAACGGCGAATAATTTTTGGTAGGCGCTGATTTTTGCGAT
TCGGGTATACCAGGCAGGGCTGGGCTTTCGCGTATCGTGAACATGTGAAG
GTCCGGTTTCGGCGGATTCGTTACACGGCTTTTCGCATATTGAAAGCAAA
ATTGATGCGTACGGCAGCTCTTGGTCTAGGCCTCGTCCTTTTTTCGGGGG
GGGTCCCACGTTCACTAGAGACAGCAGTGCATTGCTCGTTTTTTGTTTCG
AAGCTCTTTGGCTTTTATCCCACCGTTTCCATACGAGGAAAATGGGGCTT
CTTGACAACACGACAGCGTGACCCCCTCACCCATCTAGTGAGCGAAAGGA
AAACTCGTCGCGTTCCGCAAATCCTCTGAGTTTTTTCCCGCGATCCCTGG
CTGTCCTGTCTTAATCTTTTACCCCGTGATTCGCGAACTGGCCTGATGCC
GGCCGAGTGCGCAGGGAAGTGAGCTTCGACCACGAAGACAAAACCATGGG
GATGACTTACCAGAAGGACAGCAGCAACGACGCGAGCCAGTGCGATGACG
TCCGCCAGCTCTCGGGAGGCGAGCGGTCTTTCGCGACGCTGGCCATGCTT
CTCGCTTTGGGGAGGGCCAACGAGTGTCCGTTTCGGTGAGGGGACCGAAC
AGCCTTCGCGGAGACATTCACTTTCATCTGGGAAATGAAGAGACACAGGG
CTCCGTGACCCCATAACCCCAACCCTAACCAATCCCGACTCCCTTTCTCG
ATGCATACCATACACTTTGTCCCACATGCTAGCCTCAAGACAAACGCTGC
GAAGGCTCCTGCGGTGAAAGCAGAACCGACGCTTTGTTTACGTGTGCATA
CACCCCGTCAGTGTGTTGGCCGCTGCGGGCATTGTTTTTCCCCGCCCCGT
TCCAGGGAAGCGAGCGGTAAAATGGTGAAAATGGCGTACCGTATACGACA
CAAGATAACACACCCCCTGGACCGATTTTCAGAGCCCGATTACCCCGCAA
CGAGTTTGATTCTGATACCAAACGACACGCTTTCGGGCAGCTCTCTTGAT
GACATCTGGACTGACACTCTTCTCGCTGCGGGGTACTTGAGCTTTGAAAA
TAGGTCCGGGGGGTGTGTTACCTTTGTGTCGCAAAGGGGAGTATACGGTG
GTTGTGGGCCATTGGCCAGGTATGTTCTTGTGTTTTTTTTTTCTTATCAT
TTTTTGGAAAGTGTCCGACCCATGCGCGTACCAATTAACTCTCTTGGAAA
TTTCAATTTTTCGGTTCCCGTTTTCCTCGTGGTCAGGGTCATGGACGAGT
TCGACGTGTTCATGGACGCCGTCAGCCGCAACGTCGCCATCCAGCAGGTC
ATCGACTTTGCAGCGCTAGACGCCACAAGGCAGTTCATCCTCATCACTCC
CCAGGTGTGGTTGATGCTGCTGCTCTCTGCTGCTCTTTGCTGGTTGCTAC
GGCTGTCTCGTACAGTAGGCGTCTTGGAGCATGTCTTGGTTGCAATATTG
TGTGAAGTAGTGAGTTGTCGCCGGTCATATTCTGTGGGTGCGCCGCCCCA
CGTTATTTATTTATTTTTCATATTTATTTCCAGTGCTCGATAGACTCCCT
GTCACGAGGACATCTTGCCAGAGTACTGAACCGTGGTCGCACAGAAGGGT
TCCTTTCCCCAAGGCCCCCACTCCCCCCCGTCTGCGGTGCTTGCCTAAGG
TTTTTGTCGCGAAAAGGGTTCAGCCGTCCCTTTCCCTCGTCCACGGTGAG
GCCGAAGTTTGCGTACACACGCTAAGCGCTATCCATGGGCGGGGACGGAA
GCGAGAGGAAAAAATCACTCCGCAAGAAAAAATCGCTTCCGCTGAGATTT
GAAACTCACGACCTGCCTGCTAGAAGGTGTTCGGGGGTACCAACTAGACC
ACCGGGGCCCCACTGGGGCGCATGAAGTAGACATATGTACATACATACCG
CCCGTTGCGCGATGCCTGTTCAGTCCAGGTTCAGTCCAGTTCATTGGCTG
GGGCGTGTTCGCGGGCTGCGGCGCGCGAGCACGCCACCTCTCTCGTGACT
CACGCTGTTCGCCCTTTTGGTCTCCAACATCAATCAATTGTGGTTGGTGT
TCTCCTTCTTGCCGGCTCCCTTTTTTTTTCCTTCCTCCGCGTGTTCCATC
CCATCAACAAGGTCGTGACCTAACTTAGTGAGGCGGCGCTTTGTTTTCTG
TCTACTACTCCTTTTGCTGTAGAGCCCGATGATTTTTGCTTGCTCATGCG
TACAAAATCGTTGCGGCGTCTTGCCATTGGTGATGGTGTCGCCCTAAGAG
GCATGAGGGGCTCGTTAGAAAGGGAAACCTTCGAGGAGTAACCAACACTC
CTTCGTGAGGTCCGTCCACTCCCTTGCGCGCGACGTATGCGTGTGAAGTG
TGTGTGTGCGCGCGCGTGTGTGTGTGTGTGCGTTTGCCACTGATCGGCCT
CGTTGACCAACCATTTTGTTTTGTTTTTCCGTGTGATTCTGTCTTCTGGT
CGCGCCAAATCTAATGAACTTCATCAGGACCTTTCGTCGGTGATAGCAAC
GGACACCTGCAAGATCATCAAGATGAAGGCCCCGCGTAGGGGGGATCACA
ACCAGGTCACGCTGGAAGAGGCTCTTGGTACTGGCGGAGCCCCCTCCTCG
TGAAGCTCACTCTCCGCTGGTGGCGACGGCGCTAGTAAGAACGGAAATGT
AGGGCGCGGAGAGAGCATGGGGCAGGGCAGCAGGGAGCGTCAGAGAGGAT
GTTCTTCACCGCCCTACCCTCGCCTTGAGGGTTGTTTTTACCGCTTAGAG
GAAGTGTGATAAACCCTACCTTTGTTGTTTGTCGGCGGAGATGTTGGTAC
GCTTGTGGAGCGGTAAGGGAGGCATTACCTCGCTGTGGCGTTCACCACAG
GCATATGTAGGGTTGCTTTCCGAACACATGTCTGGAGCCATTAGTTAGGA
TTCATTCTCTGTCGTTCCGCCGAAGGGCCACCGAGGGAGAGAGAAGGTGC
CCGCAGTTTCCTCATTGGCCAATTTGTTGGCCGGAAATTTCCTCTGGTCG
AAAAACCCGTGGTCGACCGGTGTTGTCATCCACGGTCGTGAGGCCGCCTC
TGGGCGAAATTTAAAATCTGAATTTTCGGCGTGAGTGACAAATTGACCTG
GCAGCTCATCGCGTGAGTTTGCTTTGTATTGTACACCTTGGGAAGAACCA
GAGAAGGAGGAACGTGCACAGAGATCCGTGTGCTGCTGACACTACAGAGG
GGTATGATGAATGAGCACAGGTCCATAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig650:15558..19085+

>mRNA_L-elsbetiae_contig650.15187.1 ID=mRNA_L-elsbetiae_contig650.15187.1|Name=mRNA_L-elsbetiae_contig650.15187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig650:15558..19085+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGACGCACGCGGTGAAGACAACGAGCCGCAAGTTCAACGAGTACCT
ACTAGTGAAGGGCGCATCAGGATGCTGACGCACGCGGTGAAGACAACGAG
CCGCAAGTTCAACGAGTACCTACTAGTGAAGGGCGCATCAGGGGAAGTGA
GCTTCGACCACGAAGACAAAACCATGGGGATGACTTACCAGAAGGACAGC
AGCAACGACGCGAGCCAGTGCGATGACGTCCGCCAGCTCTCGGGAGGCGA
GCGGTCTTTCGCGACGCTGGCCATGCTTCTCGCTTTGGGGAGGGCCAACG
AGTGTCCGTTTCGGGAAGTGAGCTTCGACCACGAAGACAAAACCATGGGG
ATGACTTACCAGAAGGACAGCAGCAACGACGCGAGCCAGTGCGATGACGT
CCGCCAGCTCTCGGGAGGCGAGCGGTCTTTCGCGACGCTGGCCATGCTTC
TCGCTTTGGGGAGGGCCAACGAGTGTCCGTTTCGGGTCATGGACGAGTTC
GACGTGTTCATGGACGCCGTCAGCCGCAACGTCGCCATCCAGCAGGTCAT
CGACTTTGCAGCGCTAGACGCCACAAGGCAGTTCATCCTCATCACTCCCC
AGGGTCATGGACGAGTTCGACGTGTTCATGGACGCCGTCAGCCGCAACGT
CGCCATCCAGCAGGTCATCGACTTTGCAGCGCTAGACGCCACAAGGCAGT
TCATCCTCATCACTCCCCAGGACCTTTCGTCGGTGATAGCAACGGACACC
TGCAAGATCATCAAGATGAAGGCCCCGCGTAGGGGGGATCACAACCAGGT
CACGCTGGAAGAGGCTCTTGGTACTGGCGGAGCCCCCTCCTCGTGAGACC
TTTCGTCGGTGATAGCAACGGACACCTGCAAGATCATCAAGATGAAGGCC
CCGCGTAGGGGGGATCACAACCAGGTCACGCTGGAAGAGGCTCTTGGTAC
TGGCGGAGCCCCCTCCTCGTGA
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