prot_L-elsbetiae_contig6344.15001.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6344.15001.1
Unique Nameprot_L-elsbetiae_contig6344.15001.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: D7G978_ECTSI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G978_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.620e-66
Identity = 102/107 (95.33%), Postives = 105/107 (98.13%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQET 107
            +LPLSTTVRGPAP AQPG+EDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQ+FAAPGQAGWHLGTLFPGGTS QET
Sbjct:   26 ILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET 132          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A835YQX6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX6_9STRA)

HSP 1 Score: 186 bits (471), Expect = 2.020e-57
Identity = 91/154 (59.09%), Postives = 117/154 (75.97%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPG-QEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LPL T +RGPAP    G QEDI++E L+YFRAN++FRN+ +E +ADRTLIYLTF+ QQCL+E+EK   K+ A+RAL  LA ++FAAPG+AGW LGT+FP      E E FK Y +QCREEL  R+ +RV+  DG++SK W  FSKR+FMGKEM
Sbjct:   21 ILPLRTNLRGPAPILPKGDQEDIIDETLFYFRANIMFRNFAVESNADRTLIYLTFYAQQCLREMEKTDDKQAANRALNLLANKTFAAPGEAGWQLGTIFPAPRVRDEAEMFKAYFKQCREELGTRLIERVFA-DGTKSKWWQFFSKRRFMGKEM 173          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A7S2RMH4_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMH4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.460e-51
Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LPL T VRGPAPP    ++D+++E + +FRANVLFRN++I+ SADRTLIYLT ++QQCLKE E+     E  +AL  LA++ FA PG   W +G+++P   S  E E  K Y +QCREEL +R    ++L DGS++K W  FSKRKFMGKE+
Sbjct:   31 LLPLKTRVRGPAPPMPEDEDDVIDETIKFFRANVLFRNFEIKNSADRTLIYLTLYLQQCLKECERAKTVGEGEKALQQLALRQFAIPGDTNWAMGSMYPAPKSTAEGEGCKAYFKQCREELGRRFSQVLFLPDGSKNKWWQAFSKRKFMGKEL 183          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A7S4BNT7_CHRCT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNT7_CHRCT)

HSP 1 Score: 165 bits (417), Expect = 3.010e-49
Identity = 76/153 (49.67%), Postives = 112/153 (73.20%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LP+ T VRGPAP A    +D+++E L++F+ANVLFR+++++G+ADR LIYLT +I QCLK+LE  P +  A +ALT++A +SF  PG AG+ LGT FP   + QE +  + Y++Q REE  +R+ D+VY EDG  SK W++F+KR+FM K +
Sbjct:   20 ILPIKTAVRGPAPAAPAESDDVIDETLFFFKANVLFRHFELKGNADRVLIYLTLYITQCLKKLEGLPDRVSALKALTSMAHESFLIPGDAGFALGTFFPSPQTSQEADLTRAYLKQLREETGRRLLDKVYGEDGQPSKFWLVFAKRRFMNKSV 172          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A7S2FM28_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM28_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.280e-48
Identity = 72/153 (47.06%), Postives = 111/153 (72.55%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            MLP+ TTVRG APP +   EDI++E L +FRAN+ FRN++++G ADRTL+YL+ ++ Q LKEL++   K +A++ L  L ++SF  PG+ GW LG +FP  TS  + + F+ Y +QC+ E+ +R+ + +YL DG+++K W +F+KRKFMGK +
Sbjct:   33 MLPIKTTVRGTAPPCEADDEDIIDETLKFFRANIFFRNFEVKGGADRTLLYLSLYVAQVLKELDRQNDKTQAAKDLHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 185          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A7S1U2P7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2P7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.370e-48
Identity = 80/153 (52.29%), Postives = 113/153 (73.86%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LPL T+ RGPAP +  G+EDI++EALYYFRANVLFRNY+I+ +ADRTLIY+T ++   L+E ++     +ASR L   A+++FA PG+AGW LGTLFP      E+E FK Y +Q REE+++R+  ++Y + G ++K W +FSKRKFMG +M
Sbjct:   62 LLPLRTSKRGPAPVSPDGEEDILDEALYYFRANVLFRNYEIKSAADRTLIYMTLYVTMILRECDRIGSATDASRQLQLSAIRNFAVPGEAGWALGTLFPPPADRNESETFKAYFKQAREEMSERLIAKLYTDAG-KNKWWAMFSKRKFMGIDM 213          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A2D4BL79_PYTIN (Actin-related protein 2/3 complex subunit 3 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BL79_PYTIN)

HSP 1 Score: 160 bits (404), Expect = 3.100e-47
Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LP+ T  RGPAPPA  GQ+DIV+E +  FRANVLF N++I+G+ADR L+Y T F+  CLK+L+K   K +A R L   A+ SFA PG +G+ LG L     +  E E  +GY++Q RE +A R+ + VY  DG+RSK WMLF+KRKFM KE+
Sbjct:   21 LLPIKTRARGPAPPAPEGQDDIVDEIIQLFRANVLFTNFEIKGNADRVLVYGTLFVHLCLKKLDKCASKTDAVRVLQQAAVDSFAIPGDSGFPLGGLVRAPANANEAETIRGYLKQLREAIAFRLPEEVYGADGTRSKWWMLFAKRKFMNKEL 173          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A024TJX9_9STRA (Actin-related protein 2/3 complex subunit 3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TJX9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.570e-46
Identity = 80/154 (51.95%), Postives = 101/154 (65.58%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEML 154
            +LPL +  RGPAPP    QEDI +E L  FRANVLF NY+I+G+ADR L+Y T F   CLK LEK   K +A RAL  +A  SFA PG   + LG L     +  ETE  +GY++Q RE L+ R+ D VY++  ++SK WM F+KRKFM KEML
Sbjct:   21 LLPLKSRSRGPAPPCPDDQEDIADEVLTLFRANVLFTNYEIKGNADRVLVYGTLFTHMCLKRLEKCATKADAQRALAQIAADSFAVPGDPSFPLGGLVKTAANSAETESIRGYLKQLREALSTRLIDLVYVDGTNKSKWWMFFAKRKFMNKEML 174          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: A0A7S0Q1V8_9EUKA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1V8_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 3.790e-46
Identity = 72/153 (47.06%), Postives = 109/153 (71.24%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LP+ TT RGPAP A  G++DI++E + +F+ANVLF++++++G ADR LIYLT +I QCLK+LE  P K EA + LT +A ++FA PG   + LG+ FP   S QE +  + YM+Q REE+ +R+  +VY +    SK W++F+KR+FM K++
Sbjct:   25 ILPIKTTTRGPAPVASEGEDDIIDETIGFFKANVLFKHFEVKGPADRVLIYLTLYITQCLKKLEGAPSKMEALKTLTAMAHETFALPGDPAFPLGSFFPKPASSQEADLARAYMKQLREEMGRRLLTKVYGDSSEPSKFWLVFAKRRFMNKQL 177          
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Match: R1DRS6_EMIHU (Actin-related protein 2/3 complex subunit 3 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS6_EMIHU)

HSP 1 Score: 155 bits (393), Expect = 1.360e-45
Identity = 76/153 (49.67%), Postives = 110/153 (71.90%), Query Frame = 0
Query:    1 MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPGGTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMGKEM 153
            +LPL T++RGPA  A  G+EDIV+E L YF+ANVLF++++++G+ADRTLIYLT +  QCLK LE  P + +  +ALT LA ++F+APG+  + L + FP G S  E +  + Y++Q REEL +R+  +VY ++G  SK W+ FSKRKFM K +
Sbjct:   21 ILPLKTSIRGPAESAAEGEEDIVDETLGYFKANVLFKHFEVKGAADRTLIYLTLYTTQCLKRLETCPTQTDGVKALTALAHEAFSAPGEPRFALASFFPAGASPAELDLCRAYLKQAREELGRRLALKVYGDNGPPSKLWIAFSKRKFMNKAL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6344.15001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G978_ECTSI1.620e-6695.33Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A835YQX6_9STRA2.020e-5759.09Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S2RMH4_9STRA2.460e-5152.29Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S4BNT7_CHRCT3.010e-4949.67Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S2FM28_9STRA1.280e-4847.06Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S1U2P7_9STRA2.370e-4852.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2D4BL79_PYTIN3.100e-4751.63Actin-related protein 2/3 complex subunit 3 n=2 Ta... [more]
A0A024TJX9_9STRA3.570e-4651.95Actin-related protein 2/3 complex subunit 3 n=7 Ta... [more]
A0A7S0Q1V8_9EUKA3.790e-4647.06Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
R1DRS6_EMIHU1.360e-4549.67Actin-related protein 2/3 complex subunit 3 n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007204Actin-related protein 2/3 complex subunit 3PIRSFPIRSF016315p21-ARCcoord: 1..153
e-value: 4.0E-55
score: 184.3
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 1..152
e-value: 2.6E-57
score: 193.6
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 1..153
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilyGENE3D1.10.1760.10coord: 1..154
e-value: 5.2E-58
score: 197.7
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilySUPERFAMILY69060Arp2/3 complex 21 kDa subunit ARPC3coord: 1..153
NoneNo IPR availablePANTHERPTHR12391:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3coord: 1..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6344contigL-elsbetiae_contig6344:5849..10882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6344.15001.1mRNA_L-elsbetiae_contig6344.15001.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6344 5684..10942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6344.15001.1 ID=prot_L-elsbetiae_contig6344.15001.1|Name=mRNA_L-elsbetiae_contig6344.15001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
MLPLSTTVRGPAPPAQPGQEDIVEEALYYFRANVLFRNYQIEGSADRTLI
YLTFFIQQCLKELEKHPGKKEASRALTNLAMQSFAAPGQAGWHLGTLFPG
GTSGQETEQFKGYMRQCREELAKRMCDRVYLEDGSRSKHWMLFSKRKFMG
KEML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007204ARPC3
IPR036753ARPC3_sf