prot_L-elsbetiae_contig6340.14997.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6340.14997.1
Unique Nameprot_L-elsbetiae_contig6340.14997.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length179
Homology
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BLAST of mRNA_L-elsbetiae_contig6340.14997.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 3.070e-65
Identity = 106/118 (89.83%), Postives = 114/118 (96.61%), Query Frame = 0 
Query:    8 RYDEDGSVEWMNLPKEPAIVARQVVWVKMRSHPWWPAQVYQPSGPKAMQDGMIEVKERHAFVVFFKTDESGFVPIGQNVIQSFGSRQDLLNPVKKPSKGLEKAIVAAKVELGNMAEAS 125
            RYDEDGSVEW+NLP++PAIVARQVVWVKMRSHPWWPAQVYQP+GPKAMQDGMIEVKERHAFVVFFKTDESGFVP+GQNVIQSF SRQDL NP KKPSKGLEKAI+AAK E+GNMAEA+
Sbjct:  305 RYDEDGSVEWLNLPEQPAIVARQVVWVKMRSHPWWPAQVYQPTGPKAMQDGMIEVKERHAFVVFFKTDESGFVPVGQNVIQSFASRQDLANPAKKPSKGLEKAIIAAKSEIGNMAEAA 422
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6340.14997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHU3_ECTSI3.070e-6589.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainPFAMPF00855PWWPcoord: 29..116
e-value: 2.3E-12
score: 47.1
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 28..91
score: 11.478
NoneNo IPR availableGENE3D2.30.30.140coord: 14..129
e-value: 1.1E-13
score: 53.0
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 26..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6340contigL-elsbetiae_contig6340:7820..9866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6340.14997.1mRNA_L-elsbetiae_contig6340.14997.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6340 7820..9866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6340.14997.1 ID=prot_L-elsbetiae_contig6340.14997.1|Name=mRNA_L-elsbetiae_contig6340.14997.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MASCVKYRYDEDGSVEWMNLPKEPAIVARQVVWVKMRSHPWWPAQVYQPS
GPKAMQDGMIEVKERHAFVVFFKTDESGFVPIGQNVIQSFGSRQDLLNPV
KKPSKGLEKAIVAAKVELGNMAEASKPRTIESYAKEDRGKPPEPTPAPLG
KKARHKKEATPGRPKKGAGGGTGPRAKKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom