prot_L-elsbetiae_contig633.14978.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig633.14978.1
Unique Nameprot_L-elsbetiae_contig633.14978.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length252
Homology
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 2.700e-84
Identity = 126/162 (77.78%), Postives = 141/162 (87.04%), Query Frame = 0
Query:    1 METLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETSVVYPRSQERGQE 162
            MET  +   F+WDHARTMRMGITGAF VTPASF+WN+YAER+APG S+RAVVTKLGVS+AVLPPMLAAQF SLTLLE+ K M D   KLSRDF PTLKNA+LFWP+VSV+NS FVPVLSRP+FSSF+GVFWNVYISYQANHNGMEVGE SVVYP  Q+  +E
Sbjct:    1 METFGTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPTEQKEEEE 162          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 9.370e-83
Identity = 126/163 (77.30%), Postives = 141/163 (86.50%), Query Frame = 0
Query:    1 METLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETSVVYPRSQ-ERGQE 162
            MET  +   F+WDH RTMRMGITGAF VTPASF+WN+YAER+APG S+RAV+TKLGVS+AVLPPMLAAQF SLTLLE+ K M D   KLSRDF PTLKNA+LFWP+VSV+NS FVPVLSRP+FSSF+GVFWNVYISYQANHNGMEVGE SVVYP  Q E G+E
Sbjct:   45 METFGTERKFAWDHTRTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVMTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAEQKEEGEE 207          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A0D3E2X1_BRAOL (Uncharacterized protein n=11 Tax=Brassiceae TaxID=981071 RepID=A0A0D3E2X1_BRAOL)

HSP 1 Score: 81.6 bits (200), Expect = 7.090e-15
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 0
Query:    2 ETLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQAN 140
            +T+   +S S+D  RT RMG  G  ++ P    W  +  R+ P         K+ +   +  P++   F SL  L + +  SD   +L RDF+P ++N V++WP+   +   F PV  +P+ S+     W +Y++Y  N
Sbjct:   99 QTIAKKSSDSYDLVRTARMGGYGLCVLGPTLHCWFNFMSRLLPRQDFITTFKKMAMGNIIYGPVMMVTFFSLNALLQGEGGSDIVARLKRDFLPAMRNCVMYWPICDFITFKFFPVHLQPLVSNAFSYLWTIYMTYMGN 237          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A2R5FZK7_9STRA (DNA-3-methyladenine glycosylase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZK7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 4.340e-14
Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 0
Query:   16 RTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTK-LGVSIAVLPPMLAAQFTSLTLLE-----KDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETSVVYPR 155
            R+      G F+  P SFS+ ++ ER+ PGTS   +V K L  S       L   FT++TLL+     + + + DA +K++ D VPT     L+WP+ +++   +VP L R + SS +GV WN+Y++  AN +       +   P+
Sbjct:   72 RSAVFAFIGTFITGPVSFSFQMFLERMVPGTSGAQIVKKTLCNSTFAFCVSLPIMFTAVTLLQPGPNGERRSLEDARRKIAGDLVPTFMAGSLYWPVFNMLVYRYVPTLHRAVASSLIGVVWNIYLAMVANKDAQASNSPAKAEPK 217          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A044SV73_ONCVO (Uncharacterized protein n=1 Tax=Onchocerca volvulus TaxID=6282 RepID=A0A044SV73_ONCVO)

HSP 1 Score: 70.9 bits (172), Expect = 2.350e-11
Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   15 ARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQF-TSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISY 137
            ART+R      F V P ++ W L  E++  G +    + ++ +  +++ P+L   F T+L +LE +    +A +K  +D VP +K     WPL  ++N   +P+  R +F  F+G+FWN+Y+SY
Sbjct:   52 ARTIRFSSIILFWVAPITYRWFLLLEKL-KGETKLLPLKRMIIDQSLVAPLLTFSFITNLRMLEGNSSY-EALEKAKKDIVPVMKTNYQIWPLAQLINFYLLPLRYRLIFVQFVGLFWNMYLSY 173          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A165RUY1_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165RUY1_9AGAM)

HSP 1 Score: 67.0 bits (162), Expect = 6.020e-10
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 0
Query:   13 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDMSDAYQKLSRDFVPTL-KNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYIS 136
            D  RT R+   G  L  P    W  +  ++   T  R ++ K+ +  AVL P++ A F  S+TLLE  K +SDA ++LS  +VPTL +N  +F P    +N   +P   R +F S + +FWN Y+S
Sbjct:   47 DWIRTARLSFYGGALFGPVITKWYQFLNKLQFATPTRGIIYKVWLDQAVLSPVIVAYFFGSMTLLE-GKPLSDAGERLSTAYVPTLIRNWGVFVP-AQAINFAVIPPHMRFVFVSVVSLFWNTYLS 170          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A0R3RHA8_9BILA (Uncharacterized protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RHA8_9BILA)

HSP 1 Score: 63.5 bits (153), Expect = 7.630e-9
Identity = 34/127 (26.77%), Postives = 65/127 (51.18%), Query Frame = 0
Query:   11 SWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISY 137
            +++ ART+R      F + P ++ W L  E++  G +    + ++ +  ++  P+    F +   + +     DA +K  RD +P        WPLV ++N   +P+  R +F  F+G+FWN+Y+SY
Sbjct:   36 NYNSARTIRFSSLILFWIAPITYRWFLLLEKL-KGDASLLPLKRMILDQSLAAPLFTFSFIANLHILEGNSPKDALEKAKRDIIPV-------WPLVQLINFYLLPLRYRVIFVQFVGLFWNMYLSY 154          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A4S4N266_9APHY (HIT domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N266_9APHY)

HSP 1 Score: 65.5 bits (158), Expect = 9.940e-9
Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   13 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDMSDAYQKLSRDFVPTL-KNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYIS 136
            D AR+ R+G  G FL  P    W  + +R+   T +R V+ K  +   +L P + A F  S+TLLE  K +S+A +++S ++VPTL +N  +F P    +N  +VP   R +F   + +FWN Y+S
Sbjct:  184 DIARSARLGFYGGFLFGPIITKWLQFLQRLEFKTPLRGVLYKTYLDQGLLTPAVVAFFFGSMTLLE-GKGISEATERISDNYVPTLIRNWGVFIP-AQAINFTYVPPHLRFVFVGVVSLFWNTYLS 307          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A1D2NCD3_ORCCI (Protein Mpv17 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NCD3_ORCCI)

HSP 1 Score: 62.8 bits (151), Expect = 1.990e-8
Identity = 33/135 (24.44%), Postives = 66/135 (48.89%), Query Frame = 0
Query:   12 WDHARTMRMGITGAFLVTPASFSW-NLYAERIA-PGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGM 144
            +D  R +R G+ G  ++ P   +W  +   RI+   + +   V K+GV   +  P+  A F  +  L +   ++     ++++F   + +    WP V +++   VP+  R +F   + VFWN Y+S++ N  G+
Sbjct:   44 FDLNRNIRFGMLGLCIIGPTLRTWYGILDRRISIKASKLGTAVAKMGVDQGIFAPIFLANFLGINSLMQGNSLNQMKNDITKNFTDVVISNYKLWPAVQLISFSVVPLQYRVLFVQTVAVFWNTYLSWKTNSEGI 178          
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A5C3MTM0_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3MTM0_9AGAM)

HSP 1 Score: 62.8 bits (151), Expect = 2.060e-8
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   13 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDMSDAYQKLSRDFVPTL-KNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYIS 136
            D  RT R+   G  L  P    W  +  ++   T  + ++ K+ +  AVL P + A F  S+TLLE  K +S+A ++LS  +VPTL +N  +F P    +N   VP   R +F S + +FWN Y+S
Sbjct:   47 DFMRTARLSFYGGALFGPIITKWYQFLNKLQFSTPTKGIIYKVWLDQAVLSPAVVAYFFGSMTLLE-GKPLSEAGERLSSAYVPTLIRNWGVFVP-AQALNFAVVPPHMRFVFVSVVSLFWNTYLS 170          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G038_ECTSI2.700e-8477.78Integral membrane protein-like protein n=1 Tax=Ect... [more]
A0A6H5JW72_9PHAE9.370e-8377.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D3E2X1_BRAOL7.090e-1528.78Uncharacterized protein n=11 Tax=Brassiceae TaxID=... [more]
A0A2R5FZK7_9STRA4.340e-1432.19DNA-3-methyladenine glycosylase 1 n=1 Tax=Hondaea ... [more]
A0A044SV73_ONCVO2.350e-1131.45Uncharacterized protein n=1 Tax=Onchocerca volvulu... [more]
A0A165RUY1_9AGAM6.020e-1035.71Uncharacterized protein n=1 Tax=Neolentinus lepide... [more]
A0A0R3RHA8_9BILA7.630e-926.77Uncharacterized protein n=1 Tax=Elaeophora elaphi ... [more]
A0A4S4N266_9APHY9.940e-935.71HIT domain-containing protein n=1 Tax=Antrodiella ... [more]
A0A1D2NCD3_ORCCI1.990e-824.44Protein Mpv17 n=1 Tax=Orchesella cincta TaxID=4870... [more]
A0A5C3MTM0_9AGAM2.060e-834.92Uncharacterized protein n=1 Tax=Heliocybe sulcata ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 75..136
e-value: 2.8E-16
score: 59.5
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 11..167
NoneNo IPR availablePANTHERPTHR11266:SF17PROTEIN MPV17coord: 11..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..251
NoneNo IPR availableTMHMMTMhelixcoord: 20..39
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig633contigL-elsbetiae_contig633:16189..17505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig633.14978.1mRNA_L-elsbetiae_contig633.14978.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig633 16168..19089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig633.14978.1 ID=prot_L-elsbetiae_contig633.14978.1|Name=mRNA_L-elsbetiae_contig633.14978.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
METLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRA
VVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNA
VLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETS
VVYPRSQERGQEEEEEEEEVVLSKTAVAKKAAEKAAAVAAVASDVKGAGV
AAANSVTAPAVVGEGTPEATSEGEGGAAAAATPAGRKKRGRIVRRTSVVS
M*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22