mRNA_L-elsbetiae_contig633.14978.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE) HSP 1 Score: 269 bits (688), Expect = 1.260e-80 Identity = 131/170 (77.06%), Postives = 147/170 (86.47%), Query Frame = 1 Query: 1 GDAVCQGMETLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETSVVYPRSQ-ERGQE 507 GDA+CQ MET + F+WDH RTMRMGITGAF VTPASF+WN+YAER+APG S+RAV+TKLGVS+AVLPPMLAAQF SLTLLE+ K M D KLSRDF PTLKNA+LFWP+VSV+NS FVPVLSRP+FSSF+GVFWNVYISYQANHNGMEVGE SVVYP Q E G+E Sbjct: 38 GDALCQAMETFGTERKFAWDHTRTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVMTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSTFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPAEQKEEGEE 207
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI) HSP 1 Score: 260 bits (665), Expect = 9.450e-78 Identity = 126/162 (77.78%), Postives = 141/162 (87.04%), Query Frame = 1 Query: 22 METLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETSVVYPRSQERGQE 507 MET + F+WDHARTMRMGITGAF VTPASF+WN+YAER+APG S+RAVVTKLGVS+AVLPPMLAAQF SLTLLE+ K M D KLSRDF PTLKNA+LFWP+VSV+NS FVPVLSRP+FSSF+GVFWNVYISYQANHNGMEVGE SVVYP Q+ +E Sbjct: 1 METFGTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMLAAQFASLTLLEEGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGELSVVYPTEQKEEEE 162
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A0D3E2X1_BRAOL (Uncharacterized protein n=11 Tax=Brassiceae TaxID=981071 RepID=A0A0D3E2X1_BRAOL) HSP 1 Score: 81.3 bits (199), Expect = 2.120e-13 Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 25 ETLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQAN 441 +T+ +S S+D RT RMG G ++ P W + R+ P K+ + + P++ F SL L + + SD +L RDF+P ++N V++WP+ + F PV +P+ S+ W +Y++Y N Sbjct: 99 QTIAKKSSDSYDLVRTARMGGYGLCVLGPTLHCWFNFMSRLLPRQDFITTFKKMAMGNIIYGPVMMVTFFSLNALLQGEGGSDIVARLKRDFLPAMRNCVMYWPICDFITFKFFPVHLQPLVSNAFSYLWTIYMTYMGN 237
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A2R5FZK7_9STRA (DNA-3-methyladenine glycosylase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZK7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.120e-13 Identity = 53/168 (31.55%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 1 GDAVCQGMETLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTK-LGVSIAVLPPMLAAQFTSLTLLE-----KDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGMEVGETSVVYPR 486 GD +CQ + G +W R+ G F+ P SFS+ ++ ER+ PGTS +V K L S L FT++TLL+ + + + DA +K++ D VPT L+WP+ +++ +VP L R + SS +GV WN+Y++ AN + + P+ Sbjct: 55 GDILCQ---MILEGHVTNWP--RSAVFAFIGTFITGPVSFSFQMFLERMVPGTSGAQIVKKTLCNSTFAFCVSLPIMFTAVTLLQPGPNGERRSLEDARRKIAGDLVPTFMAGSLYWPVFNMLVYRYVPTLHRAVASSLIGVVWNIYLAMVANKDAQASNSPAKAEPK 217
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A044SV73_ONCVO (Uncharacterized protein n=1 Tax=Onchocerca volvulus TaxID=6282 RepID=A0A044SV73_ONCVO) HSP 1 Score: 70.9 bits (172), Expect = 2.500e-10 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 64 ARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQF-TSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISY 432 ART+R F V P ++ W L E++ G + + ++ + +++ P+L F T+L +LE + +A +K +D VP +K WPL ++N +P+ R +F F+G+FWN+Y+SY Sbjct: 52 ARTIRFSSIILFWVAPITYRWFLLLEKL-KGETKLLPLKRMIIDQSLVAPLLTFSFITNLRMLEGNSSY-EALEKAKKDIVPVMKTNYQIWPLAQLINFYLLPLRYRLIFVQFVGLFWNMYLSY 173
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A165RUY1_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165RUY1_9AGAM) HSP 1 Score: 67.0 bits (162), Expect = 5.300e-9 Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 58 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDMSDAYQKLSRDFVPTL-KNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYIS 429 D RT R+ G L P W + ++ T R ++ K+ + AVL P++ A F S+TLLE K +SDA ++LS +VPTL +N +F P +N +P R +F S + +FWN Y+S Sbjct: 47 DWIRTARLSFYGGALFGPVITKWYQFLNKLQFATPTRGIIYKVWLDQAVLSPVIVAYFFGSMTLLE-GKPLSDAGERLSTAYVPTLIRNWGVFVP-AQAINFAVIPPHMRFVFVSVVSLFWNTYLS 170
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A0R3RHA8_9BILA (Uncharacterized protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RHA8_9BILA) HSP 1 Score: 63.5 bits (153), Expect = 5.510e-8 Identity = 34/127 (26.77%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 52 SWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISY 432 +++ ART+R F + P ++ W L E++ G + + ++ + ++ P+ F + + + DA +K RD +P WPLV ++N +P+ R +F F+G+FWN+Y+SY Sbjct: 36 NYNSARTIRFSSLILFWIAPITYRWFLLLEKL-KGDASLLPLKRMILDQSLAAPLFTFSFIANLHILEGNSPKDALEKAKRDIIPV-------WPLVQLINFYLLPLRYRVIFVQFVGLFWNMYLSY 154
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A4S4N266_9APHY (HIT domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N266_9APHY) HSP 1 Score: 65.5 bits (158), Expect = 1.240e-7 Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 58 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDMSDAYQKLSRDFVPTL-KNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYIS 429 D AR+ R+G G FL P W + +R+ T +R V+ K + +L P + A F S+TLLE K +S+A +++S ++VPTL +N +F P +N +VP R +F + +FWN Y+S Sbjct: 184 DIARSARLGFYGGFLFGPIITKWLQFLQRLEFKTPLRGVLYKTYLDQGLLTPAVVAFFFGSMTLLE-GKGISEATERISDNYVPTLIRNWGVFIP-AQAINFTYVPPHLRFVFVGVVSLFWNTYLS 307
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A1D2NCD3_ORCCI (Protein Mpv17 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NCD3_ORCCI) HSP 1 Score: 62.8 bits (151), Expect = 1.460e-7 Identity = 33/135 (24.44%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 55 WDHARTMRMGITGAFLVTPASFSW-NLYAERIA-PGTSVRAVVTKLGVSIAVLPPMLAAQFTSLTLLEKDKDMSDAYQKLSRDFVPTLKNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYISYQANHNGM 453 +D R +R G+ G ++ P +W + RI+ + + V K+GV + P+ A F + L + ++ ++++F + + WP V +++ VP+ R +F + VFWN Y+S++ N G+ Sbjct: 44 FDLNRNIRFGMLGLCIIGPTLRTWYGILDRRISIKASKLGTAVAKMGVDQGIFAPIFLANFLGINSLMQGNSLNQMKNDITKNFTDVVISNYKLWPAVQLISFSVVPLQYRVLFVQTVAVFWNTYLSWKTNSEGI 178
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Match: A0A5C3MTM0_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3MTM0_9AGAM) HSP 1 Score: 62.8 bits (151), Expect = 1.520e-7 Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 58 DHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAVVTKLGVSIAVLPPMLAAQFT-SLTLLEKDKDMSDAYQKLSRDFVPTL-KNAVLFWPLVSVVNSMFVPVLSRPMFSSFMGVFWNVYIS 429 D RT R+ G L P W + ++ T + ++ K+ + AVL P + A F S+TLLE K +S+A ++LS +VPTL +N +F P +N VP R +F S + +FWN Y+S Sbjct: 47 DFMRTARLSFYGGALFGPIITKWYQFLNKLQFSTPTKGIIYKVWLDQAVLSPAVVAYFFGSMTLLE-GKPLSEAGERLSSAYVPTLIRNWGVFVP-AQALNFAVVPPHMRFVFVSVVSLFWNTYLS 170 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig633.14978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig633.14978.1 >prot_L-elsbetiae_contig633.14978.1 ID=prot_L-elsbetiae_contig633.14978.1|Name=mRNA_L-elsbetiae_contig633.14978.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp METLDSGTSFSWDHARTMRMGITGAFLVTPASFSWNLYAERIAPGTSVRAback to top mRNA from alignment at L-elsbetiae_contig633:16168..19089+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig633.14978.1 ID=mRNA_L-elsbetiae_contig633.14978.1|Name=mRNA_L-elsbetiae_contig633.14978.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2922bp|location=Sequence derived from alignment at L-elsbetiae_contig633:16168..19089+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig633:16168..19089+ >mRNA_L-elsbetiae_contig633.14978.1 ID=mRNA_L-elsbetiae_contig633.14978.1|Name=mRNA_L-elsbetiae_contig633.14978.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig633:16168..19089+ (Laminarionema elsbetiae ELsaHSoW15)back to top |