prot_L-elsbetiae_contig6196.14774.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6196.14774.1
Unique Nameprot_L-elsbetiae_contig6196.14774.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length527
Homology
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: A0A6H5JR72_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR72_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 2.970e-85
Identity = 223/523 (42.64%), Postives = 264/523 (50.48%), Query Frame = 0
Query:    1 LVVLETHLVLLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVARVRLLEGLRATGVLMVDADQVAEILLSQERSXXXXXXXXXXXXXXXAPEGEEESRYWGATRDGGRFVLVDCR--AAGGGSAAEGAVRARGEAASGGCVVWRRIPPAKSVGREAAAVAEILRTLKAGAAGGTEEGEVEGGSTTSMRRKLAADRPIYTG-AVTAGA---VTAPYGAGEASGRAVGGSXXXXXXXXXXXXXEARDXXXXXXXVDDAATHVCFIGSGGDSGGDSGSNGRGAGSRSAGGRGPTTFASPAAVXXXXXXXXXXEAMAPELRLARAASRTCLAAHVCVLEGGISALDEAL------SRRGLGISGVEVAGCTVGESE 511
            LVVLE HLVLLEQLLRFHDPALA H+DKC VSPAAYATPWFVT+FA Q P PALLHLWR ++EYGDPVLHQFL+LAWLV++R  L++ P +D+P   S LRL+SA  VD +F AAVALR  TPRL C  LRRAC+                                                        A  RV LL+GLRA  VL VDADQVAEILL+   S               +P   ++    G+ + GG FVLVDCR  A      A G +RA GE A  G V+WRR+ PA+S GREA AVAE+LR ++AG       GE  G        + AA      G +V +G+   V APYG     G A  G                         V  + THVCFIG GG          R            T+FA+ AA           EA APE RLAR ASR+CL   VCVL+GG +ALD A+      S  G G+  V  A C+V   E
Sbjct:  196 LVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWFVTLFASQTPAPALLHLWRLMLEYGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACF-----------------------AEDREGDGGGSCEGPGAPAGGRQQSGPPAGGPAAEPRVSLLQGLRAEEVLSVDADQVAEILLAGPSSTAVPAAAAPT-----SPATGDDGWRSGSRKFGGTFVLVDCRPPAPESEGPAGGGMRAGGEPAGDGRVIWRRVHPAESFGREAVAVAEVLREVEAGE--DALHGERSGAPCHKEAVEGAAPAHDIVGMSVVSGSSSVVAAPYG-NVGGGAAGNGLVHPTRICGHAVSGGGIRIGEVKHPVGTSTTHVCFIGCGGRXXXXXXXXXR-----------FTSFATAAA-----------EAAAPEFRLAREASRSCLTPRVCVLQGGFAALDGAMLSRGRSSENGRGVPEVGAAKCSVAAEE 665          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: D7FJC0_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC0_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 1.190e-80
Identity = 176/321 (54.83%), Postives = 201/321 (62.62%), Query Frame = 0
Query:    1 LVVLETHLVLLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVARVRLLEGLRATGVLMVDADQVAEILLSQERSXXXXXXXXXXXXXXX-APEGEEESRYWGATRDGGRFVLVDCR--AAGGGSAAEGAVRARGEAASGGCVVWRRIPPAKSVGREAAAVAEILRTLKAG 318
            LVVLE HLVLLEQLLRFHDPALA H+DKC VSPAAYATPWFVT+FA Q P PALLHLWR ++EYGDPVLHQFL+LAWLV++R  L++ P +D+P   S LRL+SA  VD +F AAVALR  TPRL C  LRRAC+                                                        A  RV LL+GLRA GVL VDADQVAEILL+   S     XXXXXXXXX  +P   ++    G+ R GGRFVLVDCR  A GG   A G +RA GEAA  G V+WRRI PA+S GREAAAVAE+LR + AG
Sbjct:  143 LVVLEAHLVLLEQLLRFHDPALAAHMDKCFVSPAAYATPWFVTLFASQTPAPALLHLWRLMLEYGDPVLHQFLSLAWLVSNRLVLMETPPDDMPATVSGLRLRSAGVVDDVFRAAVALRESTPRLFCDVLRRACF-----------------------AEDQEGDGGGSCEGRGAPAGGEQQSGPPAGGPAAEPRVSLLQGLRAEGVLSVDADQVAEILLAGPSSTAAPGXXXXXXXXXPTSPATGDDGWRSGSGRIGGRFVLVDCRPPAPGGEGPAGGGMRAGGEAAGDGRVMWRRIRPAESFGREAAAVAEVLREVGAG 440          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: M1VKD9_CYAM1 (TBC1 domain family member 23 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VKD9_CYAM1)

HSP 1 Score: 83.2 bits (204), Expect = 4.810e-13
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 0
Query:   10 LLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRA 133
            LL  LL FHDP LAV L++  ++P  ++T W VTVFAR L + A+L LW  L+  GDP+L  F+AL  L ++R+SLL A    +P+    + LQS + ++  +  A  L + TP      LRR+
Sbjct:  312 LLTALLWFHDPELAVRLERYQLTPDMFSTSWLVTVFARNLSLDAVLALWDALVLAGDPLLTIFVALVCLESNRQSLLMASEASLPEQLLSIPLQSRQDIEAAWQWARKLESRTP---AEALRRS 432          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: A0A7S2W2Q6_9STRA (TBC1 domain family member 23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2Q6_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.480e-13
Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 0
Query:   14 LLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLI---EYGDPVLHQFLALAWLVTSRRSLLDAPGEDVP-------------------KIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYD 136
            LL++HDP L  HLD   +SP  YATPWF+T+FAR +P+  L  LW   +   + G   LH F++LA  + +RR LLD+   D+P                   ++A R  L++ EGV  + G A +L   TP       RRA Y+
Sbjct:  257 LLQYHDPELCNHLDTHNLSPELYATPWFLTLFARSVPINVLFRLWDTYLLEEDEGGAHLHMFVSLALTLENRRGLLDSHPSDLPIYLTGVMGPLQQQQDSELAELAKRNPLKTVEGVSRIIGQARSLMRITP----VAFRRAVYN 397          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: D7FKI7_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI7_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.050e-12
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 0
Query:   14 LLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLR--LQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACY 135
            LL +H P L   LD+  + P  YATPWF+T+F+  L +P L  +W   + +GDP LH F+ LA+++ +  ++L A   ++P+   RL   ++S E V  L   A  L   TP+     LR A Y
Sbjct:  157 LLLYHHPRLCRFLDQYQLQPELYATPWFMTLFSNSLDLPRLYEVWDFYLYWGDPALHHFVVLAFVIGNAEAILKAEEANLPETMCRLTDGMRSVEEVRALMRTAKDLMLNTPKSFRKILRSALY 280          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: A0A8K1C6A6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A6_PYTOL)

HSP 1 Score: 80.5 bits (197), Expect = 4.290e-12
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 0
Query:   14 LLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYDG 137
            L+R+HDP L  +LD+  ++P  Y TPWF+T+F+R L    +L LW   I + DP L  F+A A +   R ++  +    +P++ S +  ++ E +D +   A+ L   TP+     L   CYDG
Sbjct:  227 LMRYHDPMLCNYLDQHAMTPELYVTPWFMTLFSRNLSRELVLQLWDFFILHEDPYLLHFVAYALVEVHRDAIFQSDVAMLPQVLSNITFETRERMDLVCQRALTLMETTPQSFKRDLYSVCYDG 350          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: K3WLM6_GLOUD (TBC1 domain family member 23 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLM6_GLOUD)

HSP 1 Score: 75.9 bits (185), Expect = 1.220e-10
Identity = 40/124 (32.26%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   14 LLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYDG 137
            L+ +HDP L  +LD+  ++P  Y TPWF+T+FAR L    +  LW   +   DP L  F+A A +  ++  ++ A    +P++ S + L++   ++ +   A+AL   TPR     L   CY G
Sbjct:  317 LMLYHDPKLCHYLDQHDMTPELYVTPWFMTLFARNLQPELVFMLWDFFLLEEDPFLMHFVAYAMVAANKEDIMSAEIAMLPQVLSNITLKTRAELEAVCETALALSKTTPRSFERDLYSVCYGG 440          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: M4BUX6_HYAAE (TBC1 domain family member 23 n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUX6_HYAAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.610e-10
Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 0
Query:    4 LETHLVLLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYDG 137
            L+  L L   L+ +HDP L  +LD+  ++P  Y TPWF+T FAR LP+  +  LW   +   DP +  F+A A +  +R  +  A    +P++ S L   S   ++ +   A A+   TP      L   CY G
Sbjct:  242 LQGSLQLYRLLMLYHDPELCHYLDQRDMTPELYVTPWFMTFFARSLPLDLVFCLWDLFLLEADPYMLHFVAYALVAANREKIFKAEFAMLPQVLSSLTFSSQHELEKICANARAILKSTPHSFNRDLYSICYGG 375          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: A0A024FWB8_9STRA (TBC1 domain family member 23 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FWB8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.030e-10
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    4 LETHLVLLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGL-FGAAVALRAGTPRLLCSTLRRACY 135
            L+  L L   LL +HDP L   LD+  +SP  Y TPWF+T+FAR L    L  LW  L+   DP L  F+A+  +  +R  L+      +P+  S ++ +S + V+ +   A V +   TP    + LR+AC+
Sbjct:  245 LQCSLQLYRLLLLYHDPELCQFLDQHDMSPEIYLTPWFMTLFARNLERQMLFILWDFLLIQSDPALLHFIAVILVCDAREDLIKTDLASLPQTLSSIKFRSIQHVNSVCLRAKVCMDERTPISFKTELRKACF 377          
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Match: F0W5J2_9STRA (TBC1 domain family member 23 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5J2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 8.080e-10
Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 0
Query:    4 LETHLVLLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLPVPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRLRLQSAEGVDGL-FGAAVALRAGTPRLLCSTLRRACY 135
            L+  L L   LL +HDP L   LD+  +SP  Y TPWF+T+FAR L    +  LW   +   DP L QF+A+  +  +R  L+      +P+  S ++ +S + V  +   A V +   TP    + L++AC+
Sbjct:  241 LQCSLQLYRLLLLYHDPELCQFLDQHDMSPEIYLTPWFMTLFARNLERCMIFTLWDFFLIQSDPALLQFIAVLLVCDAREELIQTDLASLPQALSSIKFRSIQHVKSICLRARVCMDERTPVSFKTELKKACF 373          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6196.14774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JR72_9PHAE2.970e-8542.64Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FJC0_ECTSI1.190e-8054.83Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
M1VKD9_CYAM14.810e-1341.13TBC1 domain family member 23 n=1 Tax=Cyanidioschyz... [more]
A0A7S2W2Q6_9STRA6.480e-1336.55TBC1 domain family member 23 n=1 Tax=labyrinthulid... [more]
D7FKI7_ECTSI1.050e-1236.29Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A0A8K1C6A6_PYTOL4.290e-1233.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WLM6_GLOUD1.220e-1032.26TBC1 domain family member 23 n=1 Tax=Globisporangi... [more]
M4BUX6_HYAAE1.610e-1032.09TBC1 domain family member 23 n=2 Tax=Hyaloperonosp... [more]
A0A024FWB8_9STRA2.030e-1034.59TBC1 domain family member 23 n=1 Tax=Albugo candid... [more]
F0W5J2_9STRA8.080e-1033.08TBC1 domain family member 23 n=1 Tax=Albugo laibac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 3..119
e-value: 5.5E-19
score: 70.2
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 5..84
e-value: 6.6E-10
score: 39.0
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..65
score: 15.383
IPR039755TBC1 domain family member 23PANTHERPTHR13297UNCHARACTERIZEDcoord: 9..131
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 4..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6196contigL-elsbetiae_contig6196:8323..10912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6196.14774.1mRNA_L-elsbetiae_contig6196.14774.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6196 8323..10914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6196.14774.1 ID=prot_L-elsbetiae_contig6196.14774.1|Name=mRNA_L-elsbetiae_contig6196.14774.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=527bp
LVVLETHLVLLEQLLRFHDPALAVHLDKCCVSPAAYATPWFVTVFARQLP
VPALLHLWRRLIEYGDPVLHQFLALAWLVTSRRSLLDAPGEDVPKIASRL
RLQSAEGVDGLFGAAVALRAGTPRLLCSTLRRACYDGAAAAAAAAQGKPA
GAAAAAAAAAAFSEERMPAGSGGDDGPASSDSAATSAAAATAVARVRLLE
GLRATGVLMVDADQVAEILLSQERSPPPPLPPPAAAAALTAPEGEEESRY
WGATRDGGRFVLVDCRAAGGGSAAEGAVRARGEAASGGCVVWRRIPPAKS
VGREAAAVAEILRTLKAGAAGGTEEGEVEGGSTTSMRRKLAADRPIYTGA
VTAGAVTAPYGAGEASGRAVGGSGGGAASSTAGSCVEARDTTAAAAAVDD
AATHVCFIGSGGDSGGDSGSNGRGAGSRSAGGRGPTTFASPAAVAAAAAA
AATAEAMAPELRLARAASRTCLAAHVCVLEGGISALDEALSRRGLGISGV
EVAGCTVGESEVANRLGGGDRIDPRRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR039755TBC1D23
IPR035969Rab-GTPase_TBC_sf