prot_L-elsbetiae_contig619.14768.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig619.14768.1
Unique Nameprot_L-elsbetiae_contig619.14768.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length225
Homology
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BLAST of mRNA_L-elsbetiae_contig619.14768.1 vs. uniprot
Match: D7FIC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC2_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 9.010e-46
Identity = 103/125 (82.40%), Postives = 107/125 (85.60%), Query Frame = 0 
Query:  101 DGLELPSDLLLRVKSGGLQRMEADVLEAKEMEEQAXXXXXXXXXX-GRQGARVKAGDVPRSDNFRLVVLDQDEEGVGGDSSGYAGSKAHAAENAKNFLRDRMGSRKRVSHSLFKARKSLGPSPNF 224
            DGLELPSDLLLRVKSGGLQRMEADVLEA   EEQAXXXXXXXXXX GR+ AR KAGD  RSDNFRLVVLD+D+ GV  D      SKAHAAE+AKNFLRDRMGSRKRVSHSLFKARK LGPSPNF
Sbjct:   99 DGLELPSDLLLRVKSGGLQRMEADVLEA---EEQAXXXXXXXXXXXGRRKARAKAGDASRSDNFRLVVLDEDDGGVDADDE----SKAHAAESAKNFLRDRMGSRKRVSHSLFKARKRLGPSPNF 216
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig619.14768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIC2_ECTSI9.010e-4682.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig619contigL-elsbetiae_contig619:30605..33970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig619.14768.1mRNA_L-elsbetiae_contig619.14768.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig619 30538..34933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig619.14768.1 ID=prot_L-elsbetiae_contig619.14768.1|Name=mRNA_L-elsbetiae_contig619.14768.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MAARGSRRVAVNEAPPDKVVDATDEEQSSDDEAPEEVSAAAASALAGRRR
KAEHQARQAAAAPKRKRARTSSSSAKGAGSSSNDSAIGGAASEAGGVRDG
DGLELPSDLLLRVKSGGLQRMEADVLEAKEMEEQAAAAAAAGAAGGRQGA
RVKAGDVPRSDNFRLVVLDQDEEGVGGDSSGYAGSKAHAAENAKNFLRDR
MGSRKRVSHSLFKARKSLGPSPNF*
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