prot_L-elsbetiae_contig6158.14728.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6158.14728.1
Unique Nameprot_L-elsbetiae_contig6158.14728.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length180
Homology
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: D7FZ79_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ79_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.010e-111
Identity = 158/169 (93.49%), Postives = 164/169 (97.04%), Query Frame = 0
Query:    1 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFENP 169
            MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTG+VG+VQ VIRKQNRIIVEGVN+RKYSKKPEGGGRGTTVTRE AIHVTNVNLVCP+TGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEIL VRRKPRSNLTGPKDT  EDVEEITFRGLDE+G+ENP
Sbjct:   12 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYENP 180          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A835Z5A5_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.290e-48
Identity = 82/167 (49.10%), Postives = 115/167 (68.86%), Query Frame = 0
Query:    1 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFE 167
            MK+L +P ++ +P L PKNI+   KW I+RGD V +V G    K GVV+ VIRK+NR+IVEG+N+++ +     G     V+R   +HV+ V LVCP+TG PT+ + ++LEDGTRVRVA  SGA+IPRPE+L  RR+ ++ + GPKDT  E    +TF+G+DE G E
Sbjct:   16 MKKLQEPRKRYQPSLDPKNILSPEKWLIVRGDLVQMVTGADKNKQGVVREVIRKENRLIVEGLNVQQVTLPERDGQAERVVSRPQPVHVSAVALVCPETGRPTRAARRYLEDGTRVRVAALSGAIIPRPEVLLQRRRAKNLIVGPKDTEAEAAHAVTFKGVDELGNE 182          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A7S2UWK4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWK4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 7.560e-45
Identity = 79/170 (46.47%), Postives = 111/170 (65.29%), Query Frame = 0
Query:    1 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTT---VTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFE 167
            M+   K  Q +   L P+ +IP   W I  GDKV V++G   GK GVV+ + R +N ++VEG+N +K+    E    G     V RE A+H + +NLV P TG PT+V +++LEDG RVR++K+SGAVIP+PE L +R+KPR   TGP+DT P+DV ++TFRG+  DG E
Sbjct:    5 MRYYEKGAQAMLQRLQPRAVIPIKNWNIFTGDKVAVISGKEEGKQGVVRRIRRTRNSVVVEGINFQKFPGSLEDAAPGKAPEDVYREAALHYSQLNLVDPITGEPTRVMWRYLEDGARVRISKKSGAVIPKPEGLGLRKKPRKTATGPRDTPPDDVLQVTFRGIGADGRE 174          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A7S1C4Y4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4Y4_9STRA)

HSP 1 Score: 147 bits (371), Expect = 7.450e-42
Identity = 78/146 (53.42%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   22 PKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFE 167
            P  KW I+RGD V VV+G   GK GVV+ V+RKQNRI+VEGVN+ +   + +G   G   + E A+HV+NVNLV P +G PT+V+ + +EDG+RVRVAKRSGA+IPRPE+LK R  PR    GPKDT   +    TF   DED  E
Sbjct:   25 PLGKWRIVRGDTVEVVSGRDRGKQGVVKRVLRKQNRIVVEGVNMVRKHVRADGQNAGGIFSVEAALHVSNVNLVDPVSGKPTRVAIREMEDGSRVRVAKRSGAIIPRPELLKARTTPRRASVGPKDTEAAEAHRRTF--ADEDLLE 168          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A8J2X1P5_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1P5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 9.240e-40
Identity = 81/156 (51.92%), Postives = 100/156 (64.10%), Query Frame = 0
Query:   24 NKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRK---YSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITF-----------RGLDEDG 165
            N+W ILRGDKV VVNG H G+ G+VQ V+R  NR+IVE VN+     YSK  E   + T      +IH +NVNLVCP T  PT+V+ +FL+DGTRVRVA RSGA+I +P IL  R KPRS   GP+DT  + V E+T+           R LDEDG
Sbjct:   35 NRWNILRGDKVVVVNGRHRGQSGIVQKVLRSTNRLIVEDVNVGDRMLYSKGDEDKVK-TPTKAPRSIHYSNVNLVCPVTNLPTRVARRFLDDGTRVRVAVRSGAIIEKPAILTERHKPRSTQAGPRDTPEDHVLEVTYDPVVDAEQWRRRELDEDG 189          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A9NV55_PICSI (KOW domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NV55_PICSI)

HSP 1 Score: 138 bits (348), Expect = 1.430e-38
Identity = 73/136 (53.68%), Postives = 92/136 (67.65%), Query Frame = 0
Query:   26 WTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITF 158
            W ILRGD V +  G   G+ GV++ VIR QNR+IVEG NL K   +   G  G   T E  +HV+NV ++ P TG P K+ YKFLEDG++VRV++    SG++IPRPEILKVR KPR N+ GPKDT  EDV E T+
Sbjct:   13 WKILRGDNVMINAGKDKGQTGVIKRVIRSQNRVIVEGKNLVKKHVRRGEGHEGGIFTVEAPLHVSNVQVLDPVTGAPCKIGYKFLEDGSKVRVSRGQAASGSIIPRPEILKVRTKPRINVVGPKDTVEEDVLERTY 148          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A7S3V6A7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6A7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 6.150e-38
Identity = 80/168 (47.62%), Postives = 108/168 (64.29%), Query Frame = 0
Query:    1 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHT--GKVGVVQTVIRKQNRIIVEGVNL--RKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPED-VEEITFRGLDE 163
            MKR      ++KP +  K    K KW ILRGD V V+   H   GK GVV  V R+++R+I+EGVN   ++    P+ G  G T+ +E +IH +NVNLV P +G PT+VS K LEDG++VRVAK+SGA+IPRPEILK RR+P+S  +   DT+  D V E T+  + E
Sbjct:   12 MKRTFPKRTEIKPAM--KEAAKKTKWNILRGDTVQVIERKHPEFGKQGVVTVVDRRRDRVIIEGVNTGPKRQKANPDRGLAGRTIMKERSIHYSNVNLVDPVSGLPTRVSRKTLEDGSKVRVAKKSGAIIPRPEILKERRRPKSIASTVSDTSDADLVWETTYSSIPE 177          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A2D4BXV7_PYTIN (50S ribosomal protein L24, chloroplastic n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV7_PYTIN)

HSP 1 Score: 136 bits (342), Expect = 1.420e-37
Identity = 75/156 (48.08%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    4 LMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFR 159
            L  P +K KP  L KN      W I RGD V V+NG H GK G V  VIR++N++IVE +N+     K      G +    G IH +NVNLV P  G PT+V+ +F +DG +VRV+K++G +IP+PEILK R  PR   TGP DTAPEDV E T +
Sbjct:   10 LQGPRRKAKPIELIKN------WHIYRGDLVEVINGPHKGKQGQVAQVIREKNKVIVENINMHHRYVKRTPAAAGRSYLAPGPIHYSNVNLVDPSIGKPTRVAIRFTDDGDKVRVSKKTGTIIPKPEILKERHTPRRTETGPFDTAPEDVLESTVQ 159          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: F0XVF8_AURAN (50S ribosomal protein L24, chloroplastic (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF8_AURAN)

HSP 1 Score: 134 bits (338), Expect = 2.630e-37
Identity = 72/136 (52.94%), Postives = 92/136 (67.65%), Query Frame = 0
Query:   26 WTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREG--AIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRS-NLTGPKDTAPEDVEEITF 158
            W+I+RGDKV VVNG H G+ GVVQ V+R+ NR+IVEGVN+R       G      V      ++H +NVNLVCP T  PT+V+ +FL+DGTRVRVA RSGA+I  PE+LK R  PR+  + GPKDT   DV  +T+
Sbjct:    1 WSIVRGDKVVVVNGRHRGQSGVVQHVLRQSNRLIVEGVNVRDRMLYAPGDEEKVKVKTAAPCSVHYSNVNLVCPVTSLPTRVARRFLDDGTRVRVAVRSGAIIELPEVLKERHTPRTPGVPGPKDTDEADVLAVTY 136          
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A4S8JSD8_MUSBA (KOW domain-containing protein n=5 Tax=commelinids TaxID=4734 RepID=A0A4S8JSD8_MUSBA)

HSP 1 Score: 134 bits (337), Expect = 6.570e-37
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 0
Query:   26 WTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITF 158
            W ILRGD V ++ G   G+ G+++ VIR QNR+IVEG NL K   K   G  G   + E  +HV+NV ++ P TG P K+ YK+LEDG++VRV++    SG VIPRPEILK RRKPR N+ GPKDT  + V E T+
Sbjct:   13 WKILRGDNVMIIRGKDKGETGIIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFSIESPLHVSNVQVLDPATGKPCKIGYKYLEDGSKVRVSRGLAASGTVIPRPEILKERRKPRPNIVGPKDTPIDLVLEKTY 148          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ79_ECTSI3.010e-11193.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5A5_9STRA6.290e-4849.10Translation protein SH3-like domain-containing pro... [more]
A0A7S2UWK4_9STRA7.560e-4546.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1C4Y4_9STRA7.450e-4253.4250S ribosomal protein L24, chloroplastic n=1 Tax=B... [more]
A0A8J2X1P5_9STRA9.240e-4051.9250S ribosomal protein L24, chloroplastic n=1 Tax=P... [more]
A9NV55_PICSI1.430e-3853.68KOW domain-containing protein n=1 Tax=Picea sitche... [more]
A0A7S3V6A7_9STRA6.150e-3847.62Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2D4BXV7_PYTIN1.420e-3748.0850S ribosomal protein L24, chloroplastic n=1 Tax=P... [more]
F0XVF8_AURAN2.630e-3752.9450S ribosomal protein L24, chloroplastic (Fragment... [more]
A0A4S8JSD8_MUSBA6.570e-3751.47KOW domain-containing protein n=5 Tax=commelinids ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 27..54
e-value: 0.0081
score: 25.4
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 19..124
e-value: 7.8E-30
score: 105.2
IPR003256Ribosomal protein L24PFAMPF17136ribosomal_L24coord: 63..126
e-value: 6.1E-19
score: 68.2
IPR003256Ribosomal protein L24TIGRFAMTIGR01079TIGR01079coord: 28..126
e-value: 6.8E-26
score: 88.7
IPR003256Ribosomal protein L24PANTHERPTHR12903MITOCHONDRIAL RIBOSOMAL PROTEIN L24coord: 16..159
IPR003256Ribosomal protein L24HAMAPMF_01326_BRibosomal_L24_Bcoord: 26..120
score: 15.277
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 20..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6158contigL-elsbetiae_contig6158:1262..9740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6158.14728.1mRNA_L-elsbetiae_contig6158.14728.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6158 1235..10887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6158.14728.1 ID=prot_L-elsbetiae_contig6158.14728.1|Name=mRNA_L-elsbetiae_contig6158.14728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQT
VIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTG
FPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAP
EDVEEITFRGLDEDGFENPPSVAAGGMFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR014722Rib_L2_dom2
IPR003256Ribosomal_L24
IPR008991Translation_prot_SH3-like_sf