mRNA_L-elsbetiae_contig6158.14728.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6158.14728.1
Unique NamemRNA_L-elsbetiae_contig6158.14728.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: D7FZ79_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ79_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 3.430e-111
Identity = 165/178 (92.70%), Postives = 173/178 (97.19%), Query Frame = 1 
Query:    1 SSSNFLVPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFENP 534
            +SSNFL+PAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTG+VG+VQ VIRKQNRIIVEGVN+RKYSKKPEGGGRGTTVTRE AIHVTNVNLVCP+TGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEIL VRRKPRSNLTGPKDT  EDVEEITFRGLDE+G+ENP
Sbjct:    3 ASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYENP 180
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A835Z5A5_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A5_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.250e-45
Identity = 85/176 (48.30%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:    1 SSSNFLVPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFE 528
            ++S  L+ AMK+L +P ++ +P L PKNI+   KW I+RGD V +V G    K GVV+ VIRK+NR+IVEG+N+++ +     G     V+R   +HV+ V LVCP+TG PT+ + ++LEDGTRVRVA  SGA+IPRPE+L  RR+ ++ + GPKDT  E    +TF+G+DE G E
Sbjct:    7 TASRGLLKAMKKLQEPRKRYQPSLDPKNILSPEKWLIVRGDLVQMVTGADKNKQGVVREVIRKENRLIVEGLNVQQVTLPERDGQAERVVSRPQPVHVSAVALVCPETGRPTRAARRYLEDGTRVRVAALSGAIIPRPEVLLQRRRAKNLIVGPKDTEAEAAHAVTFKGVDELGNE 182
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A7S2UWK4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWK4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.040e-40
Identity = 79/170 (46.47%), Postives = 111/170 (65.29%), Query Frame = 1 
Query:   28 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTT---VTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFE 528
            M+   K  Q +   L P+ +IP   W I  GDKV V++G   GK GVV+ + R +N ++VEG+N +K+    E    G     V RE A+H + +NLV P TG PT+V +++LEDG RVR++K+SGAVIP+PE L +R+KPR   TGP+DT P+DV ++TFRG+  DG E
Sbjct:    5 MRYYEKGAQAMLQRLQPRAVIPIKNWNIFTGDKVAVISGKEEGKQGVVRRIRRTRNSVVVEGINFQKFPGSLEDAAPGKAPEDVYREAALHYSQLNLVDPITGEPTRVMWRYLEDGARVRISKKSGAVIPKPEGLGLRKKPRKTATGPRDTPPDDVLQVTFRGIGADGRE 174
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A7S1C4Y4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4Y4_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.870e-38
Identity = 78/146 (53.42%), Postives = 99/146 (67.81%), Query Frame = 1 
Query:   91 PKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFRGLDEDGFE 528
            P  KW I+RGD V VV+G   GK GVV+ V+RKQNRI+VEGVN+ +   + +G   G   + E A+HV+NVNLV P +G PT+V+ + +EDG+RVRVAKRSGA+IPRPE+LK R  PR    GPKDT   +    TF   DED  E
Sbjct:   25 PLGKWRIVRGDTVEVVSGRDRGKQGVVKRVLRKQNRIVVEGVNMVRKHVRADGQNAGGIFSVEAALHVSNVNLVDPVSGKPTRVAIREMEDGSRVRVAKRSGAIIPRPELLKARTTPRRASVGPKDTEAAEAHRRTF--ADEDLLE 168
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A8J2X1P5_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1P5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.390e-36
Identity = 81/156 (51.92%), Postives = 100/156 (64.10%), Query Frame = 1 
Query:   97 NKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRK---YSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITF-----------RGLDEDG 522
            N+W ILRGDKV VVNG H G+ G+VQ V+R  NR+IVE VN+     YSK  E   + T      +IH +NVNLVCP T  PT+V+ +FL+DGTRVRVA RSGA+I +P IL  R KPRS   GP+DT  + V E+T+           R LDEDG
Sbjct:   35 NRWNILRGDKVVVVNGRHRGQSGIVQKVLRSTNRLIVEDVNVGDRMLYSKGDEDKVK-TPTKAPRSIHYSNVNLVCPVTNLPTRVARRFLDDGTRVRVAVRSGAIIEKPAILTERHKPRSTQAGPRDTPEDHVLEVTYDPVVDAEQWRRRELDEDG 189
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A9NV55_PICSI (KOW domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NV55_PICSI)

HSP 1 Score: 139 bits (349), Expect = 5.640e-35
Identity = 76/146 (52.05%), Postives = 96/146 (65.75%), Query Frame = 1 
Query:  103 WTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITF-----RGLDE 516
            W ILRGD V +  G   G+ GV++ VIR QNR+IVEG NL K   +   G  G   T E  +HV+NV ++ P TG P K+ YKFLEDG++VRV++    SG++IPRPEILKVR KPR N+ GPKDT  EDV E T+     RGL +
Sbjct:   13 WKILRGDNVMINAGKDKGQTGVIKRVIRSQNRVIVEGKNLVKKHVRRGEGHEGGIFTVEAPLHVSNVQVLDPVTGAPCKIGYKFLEDGSKVRVSRGQAASGSIIPRPEILKVRTKPRINVVGPKDTVEEDVLERTYDAKAGRGLPD 158
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A7S3V6A7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6A7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.330e-34
Identity = 80/168 (47.62%), Postives = 108/168 (64.29%), Query Frame = 1 
Query:   28 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHT--GKVGVVQTVIRKQNRIIVEGVNL--RKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPED-VEEITFRGLDE 516
            MKR      ++KP +  K    K KW ILRGD V V+   H   GK GVV  V R+++R+I+EGVN   ++    P+ G  G T+ +E +IH +NVNLV P +G PT+VS K LEDG++VRVAK+SGA+IPRPEILK RR+P+S  +   DT+  D V E T+  + E
Sbjct:   12 MKRTFPKRTEIKPAM--KEAAKKTKWNILRGDTVQVIERKHPEFGKQGVVTVVDRRRDRVIIEGVNTGPKRQKANPDRGLAGRTIMKERSIHYSNVNLVDPVSGLPTRVSRKTLEDGSKVRVAKKSGAIIPRPEILKERRRPKSIASTVSDTSDADLVWETTYSSIPE 177
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A2D4BXV7_PYTIN (50S ribosomal protein L24, chloroplastic n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV7_PYTIN)

HSP 1 Score: 135 bits (341), Expect = 9.340e-34
Identity = 75/156 (48.08%), Postives = 96/156 (61.54%), Query Frame = 1 
Query:   37 LMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITFR 504
            L  P +K KP  L KN      W I RGD V V+NG H GK G V  VIR++N++IVE +N+     K      G +    G IH +NVNLV P  G PT+V+ +F +DG +VRV+K++G +IP+PEILK R  PR   TGP DTAPEDV E T +
Sbjct:   10 LQGPRRKAKPIELIKN------WHIYRGDLVEVINGPHKGKQGQVAQVIREKNKVIVENINMHHRYVKRTPAAAGRSYLAPGPIHYSNVNLVDPSIGKPTRVAIRFTDDGDKVRVSKKTGTIIPKPEILKERHTPRRTETGPFDTAPEDVLESTVQ 159
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: F0XVF8_AURAN (50S ribosomal protein L24, chloroplastic (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF8_AURAN)

HSP 1 Score: 134 bits (338), Expect = 1.130e-33
Identity = 72/136 (52.94%), Postives = 92/136 (67.65%), Query Frame = 1 
Query:  103 WTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREG--AIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRS-NLTGPKDTAPEDVEEITF 501
            W+I+RGDKV VVNG H G+ GVVQ V+R+ NR+IVEGVN+R       G      V      ++H +NVNLVCP T  PT+V+ +FL+DGTRVRVA RSGA+I  PE+LK R  PR+  + GPKDT   DV  +T+
Sbjct:    1 WSIVRGDKVVVVNGRHRGQSGVVQHVLRQSNRLIVEGVNVRDRMLYAPGDEEKVKVKTAAPCSVHYSNVNLVCPVTSLPTRVARRFLDDGTRVRVAVRSGAIIELPEVLKERHTPRTPGVPGPKDTDEADVLAVTY 136
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BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Match: A0A4S8JSD8_MUSBA (KOW domain-containing protein n=5 Tax=commelinids TaxID=4734 RepID=A0A4S8JSD8_MUSBA)

HSP 1 Score: 134 bits (337), Expect = 2.770e-33
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 1 
Query:  103 WTILRGDKVHVVNGHHTGKVGVVQTVIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILKVRRKPRSNLTGPKDTAPEDVEEITF 501
            W ILRGD V ++ G   G+ G+++ VIR QNR+IVEG NL K   K   G  G   + E  +HV+NV ++ P TG P K+ YK+LEDG++VRV++    SG VIPRPEILK RRKPR N+ GPKDT  + V E T+
Sbjct:   13 WKILRGDNVMIIRGKDKGETGIIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFSIESPLHVSNVQVLDPATGKPCKIGYKYLEDGSKVRVSRGLAASGTVIPRPEILKERRKPRPNIVGPKDTPIDLVLEKTY 148
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6158.14728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ79_ECTSI3.430e-11192.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5A5_9STRA3.250e-4548.30Translation protein SH3-like domain-containing pro... [more]
A0A7S2UWK4_9STRA1.040e-4046.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1C4Y4_9STRA4.870e-3853.4250S ribosomal protein L24, chloroplastic n=1 Tax=B... [more]
A0A8J2X1P5_9STRA3.390e-3651.9250S ribosomal protein L24, chloroplastic n=1 Tax=P... [more]
A9NV55_PICSI5.640e-3552.05KOW domain-containing protein n=1 Tax=Picea sitche... [more]
A0A7S3V6A7_9STRA2.330e-3447.62Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2D4BXV7_PYTIN9.340e-3448.0850S ribosomal protein L24, chloroplastic n=1 Tax=P... [more]
F0XVF8_AURAN1.130e-3352.9450S ribosomal protein L24, chloroplastic (Fragment... [more]
A0A4S8JSD8_MUSBA2.770e-3351.47KOW domain-containing protein n=5 Tax=commelinids ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6158contigL-elsbetiae_contig6158:1235..10887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.6
Seed ortholog evalue6e-86
Seed eggNOG ortholog2880.D7FZ79
KEGG koko:K02895
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categoryother localisation
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0198@1,KOG1708@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Ec32 ortholog descriptionRibosomal protein L24
Ec32 orthologEc-13_002770.1
Exons5
Model size1714
Cds size540
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816674.0391695-UTR-L-elsbetiae_contig6158:1234..12611622816674.0391695-UTR-L-elsbetiae_contig6158:1234..1261Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6158 1235..1261 +
1691683730.2883286-UTR-L-elsbetiae_contig6158:1234..12611691683730.2883286-UTR-L-elsbetiae_contig6158:1234..1261Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6158 1235..1261 +
1622816674.115051-UTR-L-elsbetiae_contig6158:9740..108871622816674.115051-UTR-L-elsbetiae_contig6158:9740..10887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6158 9741..10887 +
1691683730.3650947-UTR-L-elsbetiae_contig6158:9740..108871691683730.3650947-UTR-L-elsbetiae_contig6158:9740..10887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6158 9741..10887 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816674.050009-CDS-L-elsbetiae_contig6158:1261..13421622816674.050009-CDS-L-elsbetiae_contig6158:1261..1342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 1262..1342 +
1691683730.3053677-CDS-L-elsbetiae_contig6158:1261..13421691683730.3053677-CDS-L-elsbetiae_contig6158:1261..1342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 1262..1342 +
1622816674.0606236-CDS-L-elsbetiae_contig6158:4079..41931622816674.0606236-CDS-L-elsbetiae_contig6158:4079..4193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 4080..4193 +
1691683730.3152838-CDS-L-elsbetiae_contig6158:4079..41931691683730.3152838-CDS-L-elsbetiae_contig6158:4079..4193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 4080..4193 +
1622816674.0767975-CDS-L-elsbetiae_contig6158:7530..76341622816674.0767975-CDS-L-elsbetiae_contig6158:7530..7634Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 7531..7634 +
1691683730.3254182-CDS-L-elsbetiae_contig6158:7530..76341691683730.3254182-CDS-L-elsbetiae_contig6158:7530..7634Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 7531..7634 +
1622816674.0908084-CDS-L-elsbetiae_contig6158:8990..90901622816674.0908084-CDS-L-elsbetiae_contig6158:8990..9090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 8991..9090 +
1691683730.3384762-CDS-L-elsbetiae_contig6158:8990..90901691683730.3384762-CDS-L-elsbetiae_contig6158:8990..9090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 8991..9090 +
1622816674.1030226-CDS-L-elsbetiae_contig6158:9599..97401622816674.1030226-CDS-L-elsbetiae_contig6158:9599..9740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 9600..9740 +
1691683730.3508162-CDS-L-elsbetiae_contig6158:9599..97401691683730.3508162-CDS-L-elsbetiae_contig6158:9599..9740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6158 9600..9740 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6158.14728.1prot_L-elsbetiae_contig6158.14728.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6158 1262..9740 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6158.14728.1

>prot_L-elsbetiae_contig6158.14728.1 ID=prot_L-elsbetiae_contig6158.14728.1|Name=mRNA_L-elsbetiae_contig6158.14728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGKVGVVQT
VIRKQNRIIVEGVNLRKYSKKPEGGGRGTTVTREGAIHVTNVNLVCPDTG
FPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILKVRRKPRSNLTGPKDTAP
EDVEEITFRGLDEDGFENPPSVAAGGMFS*
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mRNA from alignment at L-elsbetiae_contig6158:1235..10887+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6158.14728.1 ID=mRNA_L-elsbetiae_contig6158.14728.1|Name=mRNA_L-elsbetiae_contig6158.14728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9653bp|location=Sequence derived from alignment at L-elsbetiae_contig6158:1235..10887+ (Laminarionema elsbetiae ELsaHSoW15)
TCGTCGTCTAATTTCCTTGTGCCAGCGATGAAGCGGCTGATGAAGCCCAC
CCAGAAGTTGAAGCCTGGTCTGCTGCCTAAGAACATCATCCCCAAAAACA
AGTGGACGGTGAGTCAACTGCTGTCGCCAACATGGCCGCCGCCTGCAGGC
TTCCCCGCGCGGTACATCATAGCTTGCAACACGGCTGTGCTGCACTCGTT
CATGATTCGCCGTGAATTGAGAGATAAAATAGGGAGCTACATACAAGCTA
CAAGTAGCCTGCAGCAAACGAGGCAGGCACGTGCAATCACCGCTCTGCTA
AATCTGACTACCTGTACGAAAGAAGTTTGCGCCGCACGTGCAGCAGCCTA
AAAAGCAAGGTTAGAACCTACAAATACGCAGAGGCCGCGAGCAGCCATAC
CAGCGATCGTCACACAGTGCACATAAGATGTACGTAGGTTAGGGTTAGGG
TTATCACGGAGCAGTACACCAACTACCCGGTACCTCTGTAGGGGGGCTCT
CTTTACATCTTAAGTGCTTGCTGTGTACGGTACCGTAGGTGACACAAGAT
ACCACACCCCCTGGACCGACTTTTAGAGCTCCATTACCCCGTAACGAAGA
GGGTGCCAGCACCAAACGACACATTTTCGGACAGCCCTCGACTAGATCTT
TCCGACGCCACCCCCCTTAAGGCAGTGGCGCTCTTCTGGCAGGGGAGGAA
TCGAGCTTTGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGCACTTTTGT
CACCTACGGTACCTACCGGTGTGGATGCAGGCACAGTAGCAGCAAGCAGT
GTGTAGCGCCACGGCGCCACCCCAAAAATAATCCACCCGTTGAGAGTTTT
AGAGGGACATATATATATAGCAGCAGTGGCAGGAGGGGGATCACCTGTTT
TGACTTGGGGGTGGTGCGTGAAAACAACAGCTTTTTGAGCACCACTGCTG
CATCTCACACACCCACAGCCAGCGTTACCTGGTACGCATCTACCGTAGGT
GACTCAAGACACCGCACCCTCTGGACAGATTTCCAAGGCTCAATTCCTCC
CCAGAGTGCTACTCAGTGCCGGAAAGGGGTGGCGTTGGAAATATCTAGTC
GAGGGCTGTCCGAAACTGTGTCGTTTGGTGCCGGCACCCTCTTTGTTGCG
GAGTAATGGAGCTCTAAAATTCGGTCCAGGGGGTGTGGTATCTTGTGTCA
CCTACGGTACCGTACACAGCAAGAAGCACTTAAGATGTAAAGAGAGCCCC
CCTACAGAGGTACCGGGTAGTTGGTGTACTGCTCCGTGATTCGCTAAATA
GTTTTGAAACACCTCTGCTGCCTCCGCTTCGCGTCTTGGAGGGCGCGACT
ACCGTACATTGGTGACACAAGATGCCACACCCCCTGGACCGATTTTTAGA
CCTCCCTTACTCCGTTACGAAAAAGGCGCCAGCACCAAACGACACATTAT
CGGACAGCCCTGGACTAGATATCTCCAACGCCACCCCCTTTCGGCATTGG
CACTGTTCTTCTTGCTGGGGAGGAATCGATCTTTGAAAATCTGTGCAGGG
GGTGTGGTATCTTGTGTGTTACCTACGGTACCCTCTACCTCGCACCAACA
CACACATACATATGGCTTTCCCCTCAATGTTCTTGATCGATGACAATGGA
GCGTGGAAACCCGGATTTCGTGTGTTTTTCTATTGTACTGTACTGAGCCA
ATATTACGTCACTTATAATGGAATACCGGTTGAAATCCGCGGAGTCCTGG
CTCTTCATGTGGGGGCTAGGTTCCATTTTTTATTTGACTGATCTCTATTT
AAAACCGTGTTGTATGTATCCTTTCGAGTAAAAGAAACCAGAAAAGACCC
CTCACACTGAATATACCCGCATGTACGTACATACCGTCGGTGACACAAGA
TACCACACCCCCTGGACAGATTTTCAAAGCTCGATTCCTCCCCAGCAAGA
AGAGTCCCAGTACCGAAAGGGGGTGCGTTGGTTGGAAATATCTAGTCGAG
GGCTGTCCGAAACTGTGTCGTTTGGTGCCGGCACCCTCTTCGTTGCGGAG
TAATTGAGCTCTAAAATTCGGCCCAGGGGGTGTGGTATCTTGTGTCACCT
ACGGTATGTACATACGTTCGTGCGTCGTAGAATGCTTGCAACCCACTTGT
TGGGACATTTTCGACTTCCACACACAAGTACCTTAATTTGTGTGGGCTAC
CTATTTATTGATGTACATATATATCGCACACCTGCGCCGGGTTCCAAAAC
TCGGTTACCGTCGGTGACACGAGATACCACACCTCCTGGACCGAATTTTA
GAGCTCCATAACTCCGTTACGAAGAAGGTGCCAGCACTAAACGACATTTT
TTTGGACAGCGCTCGACTAGATCTTTCCAACGCCACCCATTTCGGCGCCG
ACACTCTTCTTGCTGGGGAGGAATCAAGCTTTGAAAATATGTCCAGGGGG
TGTGGTATCTTGTGTCACCTACGGTAAACAATACAGTACCGTTATGTACC
CGGATCTCACAGAGACCCTACAGATCCAGACCTTGGTATGTTCGCAATTT
TGTTTTCGCAGTTTTCTTTAAAAATAAGCAAAGAGTCAAAGATGGAACCT
AACCCACACTAGAGCAAAGACTCGATATGGGGTTCAAACGGCATTTACCT
ATACAGAGACGCAATATTTGGCGAAGCGAGCAGAGAAACAACCCATACAT
ATCAGAAGAGTTCAACATCTCCCCTCCCCTGCAAAGATTTAAGATTTGCG
AGGTCGGCCAACAATTATTCCTTTTCTTTTTGTTCCCCTCTCCGACGATC
TCTCGGGCCTTCTCGCCGTCGCCGCCCGTCGCCGTCTCGCCGCAGATTCT
GCGGGGCGACAAGGTGCACGTGGTGAACGGGCACCACACCGGGAAGGTCG
GGGTCGTACAGACCGTGATCCGGAAGCAGAACCGCATCATCGTGGAAGGG
GTGAATCTGGTGAGGACAAGAAGACGCAGGGGAGATGTTGAATTCTTCTG
ATATTTAGGTTGTTTTTTCTGCTCGCTTCGCCAAATAGTACGTCTCGGTA
TGGAATACCGTTTGAACCCCATATCGAGTCTTTGCTCTAGTATGGGTTAG
GTTCCATCTTTGATTCTTTTTTTTATTTGAACAAGAAGAAGAAGAACGGA
GATTTGAAGGAGGGAAATAGAGTGGGAGGAGAAAGAGCGGGCTGTACCGT
AGGTGACACAAGATATATACCCCCCCCCTCCCCCCCCCCCCCCCCCCGGC
GGGGTGCTCAAAACCCCAGTTGGCCCGGAGGGGGAGAAGATAGATAGGGA
GAGAGATAAAGAGAGAGAGAGATAGAGAAAGAGAGAGAGAGAGGGGGAAG
GGCTAGCTGTACCGTAGGTGACACAAGATACCCCCCCCCCCTCCTGGGCA
GGTTCTTAAAGCTCAATTCTGCCGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAAAGAGAGAGAGAGAGAGAGGGGGGGGGAAGGGCTAGCTGAACCGTAG
GTTACACAAGATACCACACCCTTCCCCTCCCTGGACAGATTTTCAAAGGT
CATTCGGCCGTGACGAAGAGGGCGCCAGCACCAAAACGGTACCTTTTCGG
ACGGCCCTCGACTAGATAAATCTTTCCAGCACCACCCCATTTCGGCACTG
ACGCTCTTCTTGCTGGGGAGGAGTCGAGCTTTTGAGAATCGGTCCGGCGG
GGTGTGGCATCTTGTGTCACCTACGGTGTTTTTGTTTGGTAGATCTTTTG
GCGTTGCGCTTGTGGCCCAGTCAATCAGTCTTTCTCTGTGGGGGGGGGGG
TTCCCGTTTTCCTTCTTAAATAGTTCCGAGTAGTATGTACTATACCTTTG
ATTTTGTGCTGGCGAGACGCAAAGACCCCCCGGGGTCCAGTTTAGTACCA
CCGGGCGGGTATGTACCCTGTTTTTGTTTTATTTTTCTTCCGCGGCGTCG
AGTGTGCCTTGCTTTGTGACCACGGGCCCCCAAGGATGTTTTGGCAAGTT
TGGACTAGAGAGCTAATGTGAGAAACAACAGCAACAACAACAAGCCTCTC
TTCGAGACGAATGCCTGTCCTGTCGAAAAAGGCGTTTTTGCTTCTGGAAG
TTTTCTGAATAGCCTGCGCAGAGTTTTTCTTGAGCTATTTAGCACATGGG
ATCAAGCGGAGTAATCGGGAAAGGAGGGGTCGGGGGTCTTGGGGGTTTAG
TCCCTGTCTCTATTTCCATGTGTAGTAGATACAAAAAAGTCAATTCCTTC
GCGACGGCGGTCCTACACGTGTCGGCTGTCTGTCTTCTGTCTGCCGTGTG
TACGTCTGACCGACCTATAAAAAAGAGATTCCAGGGGACTGCTCTGAGAC
ACGTCCCTCTCTGACCACAGTATTTATAGTCCGATTCCGCTACAATATAA
AAAATATTGTATTTTATTTCTATTAATTAATTAATTATTTGGTTTGGAGC
AGGGAATATACTGCTCTGAGACACGTCCCTCTCTGACCATGCGAGACTAG
GTGTATCACAGTATTTATAGTCCGATTCCGCTACAATATAAAAAATATTG
TGTTTTCTTTTTATTAATTAATTAATTATTTGGTTTGGAGCAGGGAATAT
ACTGCTCTGAGACACGTCCCTCTCTGACCATGCGAGACAATGTAGGTGTA
CTATGCGAGACTAGGTGTATCACAGTATTTATAGTCCGATTCCGCTACAA
TATAAAAAATATAGTGTTTTTTTTTAATTAATTAATTAATTATTTGGTTT
GGAGCAGGGTATAATGCAATTAGTCGTTTTTTTTGTTGTTTTTTCGTGTC
CAACACCGACCGGTCGCACACACGTGATACATAGGGTTTTGTTTGGAGCA
TAAATATACCGAATGACACAAGATAACACACCCCCTGGATCGATTTTCGA
AGCTAAGTTATTCCGCACGGGGTATGATCATAATACCCGACGACACGTTT
TCGGACAGCTCTCGATGAGATCTTTCCGACGCCGCCCTTTTTCGGGGCTG
ACGCTCTTCTCGCTGTGGAGTACTTGAGCTTTGAAAATCGGCCCAGGGGG
TGTGTTGTCTTGTGCCGTATACGGTACCATACAGAATTACTCGGCACGTC
GAAGGTAATAACTGCCTCACACAAGAGACAGGACGATGATCGTGGGGGCA
CGCACGAATCGGTGAGGGGTATAGGACACGCACGGTCACGCCCAGCCCGT
ACGCAGAAGGCTTTGGCGACTCCCCGCTGGCTGTAGCCCCTGCCTTGTAC
CTACCGGCACATACGTACCAAACATTACAAATGTTATTATTTTATTTGCC
ATCCGACAATTGCAGATGTATCCAACCAAAATTTCTTCCAAACTGATGAT
GCTATTCTCACATGCTCGAACACACTTGCGTAGAATGCACAAACCGCCAA
CACTACCAAACCATATATCAAGTGTTCTCTCGGTACGTGTTACAAACTTT
GTGTGTTGTACCATAAGCTAGGATTGAACTCGCTGTTGCTGTACCAGCCT
TGCAATAACAGGTTGGAAGTTGGGATATGGGCATGAGTCCCGAATTCTCT
CGGTGCGTGCTGTTTTGTGCGCTTTGCACTTGGCGCTGCTGTTGTTGGTG
GCAGCGTGTGTTTGCACTTGGGCGTTCACGGTTTCAGGGGGTCGGGCATG
GAATACAGATGTTTGATACCTACATTGTCGTACACGTTATGTGGTGTACT
GTAGGCTAGGACTGAACTAGCTAAAATGTGCTGTGCCAGCCTTGCACTGG
GTTGGAAGTTGCCATTGGGGTGAGTCCCGAATCCTCTCGGCGCGTGTTGT
TTTGTGCGTTTTGCACTTGGCGCTGCTGTTGTTGGTGGCAGTATGTATGC
ATTTGCAATTGGTCGATCATGGATCTCGGGAATCCGGTAAGCTAAACAAA
CCCCTTGGCAGGGCACGAGGAATATCAGAGTATGTACCGACACAAGGCCC
CCGCGCGCACCCACTTTTTCTTGTTTTGTTTTGGAGATGCTGGCTTGGAA
GTAACTGCAATACCGTATATGACTCAAGATAACACACCCCCTGGACCGAT
TTCGAAAGCTCGATTACTCGACAGCGAGAAGAGTTTCAGTCCCGAAAAGA
GCGGCGTTGGAAATACCTGTCCGAAAATGTGTCGTTTGGCATTAAAATCA
CAACTCGTTGCGGAGTAACCGAGCTTTGAAAATCGGTCTAGGGGGTGTGT
TATCTTGTGTCATATACGGTATGTACCGCCGTCGCCGCCAGCGCCACTCC
ACCTGATGTCTAATCCCGTCTTGGTGATAATCTTTTGTTTTTGCAGAGAA
AATACAGCAAGAAGCCGGAGGGAGGAGGCAGAGGGACTACCGTTACAAGA
GAGGGGGCCATCCACGTCACAAACGTCAATCTTGTCTGTCCGGACACGGG
GTGAGTGGGTTCGGGATGTATGTATAGCAGTACCCATGATTGTGGTGTTG
GTTTTTTTTTTGTCGATTTTGTTTTATCTTGTTGCTGCCGCTATTGTTGT
TTGTTTGAAAGCAAACAAAAAATCAAAGATGGAACCTGACCCACACCAGA
GCAAAGACTCGATATGGGGTTCAAACGGTATTCCATACAGAGACGTGAAA
TATTTGGCGAAGCGAGCAGAAAAACAACCTAAATATCAGAAGAGTTCAAC
ATCTCCCCTGCAAAGATAAGATTTAAGATTTGCGAGGTCGGCCAACAATT
ATTCCAGCGGGTATGTAGAGTCCACCGTGATGCCGTAATGTTGTCATCTG
CTTCAAAATAGGAACACATCGCATTGTTGAACTAAATCAAAATCTGGTTT
AATATATGTATGCAGGTTACTGCTTTAGAGGAGAAAATACAATATTAATT
GTTGTTGTCGTTATTATTTTATTTTTCGTGTACCTTTTCTTAGGTTTAAG
TTAGCCTATGACCACGGGAATTGACCGCATCAAGTGCTGGATTAGTACGG
ACATTGAGAGGTACTGGATGGAGAGATCGGAACGGTTTTTAATGTGAAGA
CAACATACATTGGTGTTGGTGATGTGGGTGGTGTGGTAGAAATGATGCTG
TGTGGTCTGCCGAGGAAGGAAGGAACTCCGGGTGGGGTTTCTCCTCAACT
CTACTGCCTGTACGTATGTAAGTACTGTAGGTGACACAAGATACCACACC
CCCTGGACCGAATTTTAGAGCTCCATAACTCCGTAACGAAGAGAGTCCCA
GCATTAAACGACACATTTTCGGACAGCCCTCGACTAGACCTTTCCAACGC
CGCCCCTTTCGGCACTAGCACTCTTCTTGCTGGGGAGGAATCGAGCTTTG
AAAATATGTCCAGGGTGTGTGGTATCTTGTGTCACCTACGGTATGTAAGT
ATGTCTGTAGTCTGTTGCAACCGGCGGCGACTGGCATGGGCCAGCATCGG
GGCTGGGTGTTTTTTTTTTTTTTCGGGTTTTCGCCCTCTGGGTTTTCCAC
CGCAAGAACGCCGTCACGCCGTCCAGGCGCTCAGTCTTGGCCCTTGTCGG
CGGCGGTGTTGGGATCGCTTTTTCGACAGCTTTCGAAGTGAAGTGATTTC
TTAAAAGCACAGAAACCCAGTGTTCTGAGTTTTGACACTTATGTATGTCA
ACCGTGATGAGTATGTATTTACCCGTTACACGAGGCTGACGTCGTCTTCT
TTGCTTGTCACGCACATGCTCGATTTGATCGCCCCCCTCTCTCCCTCTGT
TCCTCCCTCCTTCGCTATTTTTCGCTTATTAATGTTTTGTTTCTACCTTG
TTTCAGCTTCCCGACGAAGGTTTCGTACAAGTTTTTGGAGGACGGGACCC
GGGTGCGGGTAGCCAAGAGGAGCGGGGCCGTTATTCCAAGACCAGAGATT
CTCAAGGTAACTTTTTTTTTTTTGTCTGTTTTATTCGCTGTGATCTCGTG
TCTGTTTCAGGTGTATCGTTACCCCCGTTGGCGTGTGCTGCCTTTTAAAA
ATAAACAATGAATCAAAGATGGAACCTATCCCACACTAGAGCAAGGACCC
AATATGGGGTTCAAACGGTATTCTATACAAAACAGTGACGCCTTTTCACG
ATGTTGAGTTTATGTGTGCTGCCACTACGATGGTGTTGATTTTTTCCACT
TGTTATCTGGCGCTGTTGGTGGTGTCAGATTTTGTTTTTTGTTCTCGGAG
TATTTTTATTCGAACGGGGGCGGAGGTTTTGTTCGTAAAACAAACAAATT
CGAGATTGCTGGCACCCTCATTCCTAGGATTGGCGGTTGTGACATCTTTT
AAACAAGCATGCATCGGAGTGGGAGACTCTTTAGTTCGCAGCCATCTGTG
TTCAACCTAACAGATCCCCTGTTCGTTTGGCTTCGTGTTGCGTATTTCGT
GTGGCCGGCGCACAGGTACGTCGGAAACCGAGAAGCAACCTCACGGGCCC
CAAGGACACCGCCCCGGAGGACGTGGAGGAGATTACTTTCAGGGGGCTAG
ACGAGGACGGTTTCGAGAACCCCCCGTCGGTGGCGGCAGGCGGAATGTTC
TCCTAGTGGTGCCGCTTCCAGCCCATGTGGGCGCGCTGCTTCTATTCGTC
CGTCGCGAGAGGGGTCGCTTGACGGGTGCTTTGCTGACGTGTGGTTGTTT
TGTGGCAAGGGGAGAATCCGTCCGCGTTTTGCGGGAGTACGGTACGCTAC
CCGCGGTGTTGTGTCCAGCAGGGCTGAGCGACAATAAGCCGCTTCCAAAC
GAAGGGGATGGGTTATCATCTCACTCACCAGAGTTTTGGTTGGTGCGGAT
TGACACCTGCACAGGATATCTAGTCTATTTATACATGTAAAGGGTTATTT
TATTTTTTTATTTCCTCCCATTATTGGCTCATTATTCGTCGTCTGCCCCG
CTGGCCCCCTTCCTCCACTACGACTAGCTAGACGACCCAACCGGGGTCAC
ACAGGAGGTAATATAAGCTGTCTGTTTTTCCCATCTTGGGTCATTGGTTG
TCACGGTTCAGTTTTAGCCTCTGACGCGCGCGCGAAAACCATGGGTGGGT
GCCACAGCCACACCGTCTGCTCACGTGCCCCTAGGCAACGTTTGCCCCTT
TGTCACTGGCGAAGTCAGGTGGCACGGTCGACATACACGTGTTGGAAGTT
CCCGTTACAGGCGCAGTCCTATCGTCGTTACAAGTGGGGGGTTGAAAGGG
GGTACCGGTTGATGCTCTCTCTTTAGCCTGCAGTCCGCGGAGGTGCACAC
TCTGAGACGGGTCTTGTCGGGAGCTACTTGGAGGTTGAGAGCGGCGGCCC
AAATTTGGCTGTGGGACAAACTTCGCCCAATGCTGGAGGATAGCGAGGAT
GAAGCGGAGATGGATACAAGACGGGGGAGGGGGGAGATGCAAGTAAATTT
TGTCGAATCGCTCCTGCTGCCGTAGACCATTCCGAACTACCCTCGATCGT
GTGCCTCCGTGCACAAACGGGAAGCCATGCTTGCTTTCATCTACCCTGGA
AGGGTTAGTCCAGTTGCGAGTATTTCGTCGCAGGCTAGATAAGGAGGGAG
GACATAAGCCTGCCCGGCGTGTGTTCCGTCTGACGTACGTAATACGTACA
CACGAAGATGCAAAGAGGCAGACTGGTTCCGAAAGAGAGATTGCCAAACA
GGGTCTGCCATCGTCTACCGCCGCTTGATTGAGAGACGTGATCTCCCTCG
GTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6158:1235..10887+

>mRNA_L-elsbetiae_contig6158.14728.1 ID=mRNA_L-elsbetiae_contig6158.14728.1|Name=mRNA_L-elsbetiae_contig6158.14728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1080bp|location=Sequence derived from alignment at L-elsbetiae_contig6158:1235..10887+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGCGGCTGATGAAGCCCACCCAGAAGTTGAAGCCTGGTCTGCTGCC
TAAGAACATCATCCCCAAAAACAAGTGGACGATGAAGCGGCTGATGAAGC
CCACCCAGAAGTTGAAGCCTGGTCTGCTGCCTAAGAACATCATCCCCAAA
AACAAGTGGACGATTCTGCGGGGCGACAAGGTGCACGTGGTGAACGGGCA
CCACACCGGGAAGGTCGGGGTCGTACAGACCGTGATCCGGAAGCAGAACC
GCATCATCGTGGAAGGGGTGAATCTGATTCTGCGGGGCGACAAGGTGCAC
GTGGTGAACGGGCACCACACCGGGAAGGTCGGGGTCGTACAGACCGTGAT
CCGGAAGCAGAACCGCATCATCGTGGAAGGGGTGAATCTGAGAAAATACA
GCAAGAAGCCGGAGGGAGGAGGCAGAGGGACTACCGTTACAAGAGAGGGG
GCCATCCACGTCACAAACGTCAATCTTGTCTGTCCGGACACGGGAGAAAA
TACAGCAAGAAGCCGGAGGGAGGAGGCAGAGGGACTACCGTTACAAGAGA
GGGGGCCATCCACGTCACAAACGTCAATCTTGTCTGTCCGGACACGGGCT
TCCCGACGAAGGTTTCGTACAAGTTTTTGGAGGACGGGACCCGGGTGCGG
GTAGCCAAGAGGAGCGGGGCCGTTATTCCAAGACCAGAGATTCTCAAGCT
TCCCGACGAAGGTTTCGTACAAGTTTTTGGAGGACGGGACCCGGGTGCGG
GTAGCCAAGAGGAGCGGGGCCGTTATTCCAAGACCAGAGATTCTCAAGGT
ACGTCGGAAACCGAGAAGCAACCTCACGGGCCCCAAGGACACCGCCCCGG
AGGACGTGGAGGAGATTACTTTCAGGGGGCTAGACGAGGACGGTTTCGAG
AACCCCCCGTCGGTGGCGGCAGGCGGAATGTTCTCCTAGGTACGTCGGAA
ACCGAGAAGCAACCTCACGGGCCCCAAGGACACCGCCCCGGAGGACGTGG
AGGAGATTACTTTCAGGGGGCTAGACGAGGACGGTTTCGAGAACCCCCCG
TCGGTGGCGGCAGGCGGAATGTTCTCCTAG
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