prot_L-elsbetiae_contig6155.14727.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6155.14727.1
Unique Nameprot_L-elsbetiae_contig6155.14727.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length277
Homology
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A6H5KK36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK36_9PHAE)

HSP 1 Score: 375 bits (963), Expect = 1.100e-125
Identity = 199/261 (76.25%), Postives = 208/261 (79.69%), Query Frame = 0
Query:   16 LSNLPAWMTKGKGAAPGSPENIXXXXXXXXXXXXXXXXXXXXXXXXGRRQGRFGPQEKVGGAGAXXXXXXXXXXXXXXXXXXGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK 276
            LSNLPAW+TKGKGA PGSPE +                        G+R GRFGPQ K GGAG                   GMNFAERMMAKMGH +GQGLGAS+QGISQPLQSMSAGGGMGVIDMH +DKKRMGGPSDTPAP  ARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLI+EIKGG+TPDT+RVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQ DEEK
Sbjct:  235 LSNLPAWVTKGKGATPGSPEMLEPPTPARRPPPVPGQLDAVPEA--GQRGGRFGPQAKAGGAGIGGGSAAES----------GMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPA-ARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIKGGDTPDTERVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQADEEK 482          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: D7FL75_ECTSI (DNA-damage repair protein drt111, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL75_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 2.020e-99
Identity = 170/254 (66.93%), Postives = 183/254 (72.05%), Query Frame = 0
Query:    1 MAALEATMGRGRGRGLSNLPAWMTKGKGAAPGSPENIXXXXXXXXXXXXXXXXXXXXXXXXGRRQGRFGPQEKVGGAGAXXXXXXXXXXXXXXXXXXGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIA 254
            +AA++         GLSNLPAW+TKGKG  PGSPE                          G+R GRFGPQ K GGAG                   GMNFAERMMAKMGH +GQGLGAS+QGISQPLQSMSAGGGMGVIDMH +DKKRMGGPSDTPA P ARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLI+EIKGG+TPDT+RVRIFVAFEKQESAVK  L+  GR  GG+  A
Sbjct:  220 VAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGSPE-----------------MPLDAVPEAGQRGGRFGPQAKAGGAGVGGGSAAES----------GMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAAP-ARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIKGGDTPDTERVRIFVAFEKQESAVKGLLDELGR--GGKMGA 443          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A6U3SBK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SBK6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.880e-55
Identity = 100/180 (55.56%), Postives = 120/180 (66.67%), Query Frame = 0
Query:   98 GMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAP-PPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK 276
            G N A  MM  MG T G+GLG   QGIS+PL++   GGG G +    A   +    S  P P P A+KKR LF NPT VLLLKNMVGPGEVD ELE E   EC +FGPVR C+++E+KG   P  Q VR FVAFEKQESA+KA+L+M GRFF GRQI  +F+ E +F   DL PQ D+E+
Sbjct:   27 GGNLAMNMMKGMGWTDGEGLGREGQGISRPLEARPTGGGQGAVANPGARGNQKLSTSMLPPPGPAAKKKRALFRNPTTVLLLKNMVGPGEVDSELEKEVQEECSKFGPVRTCVVYELKGA--PPDQAVRTFVAFEKQESAIKAFLDMEGRFFAGRQIRCAFFNETRFRNRDLVPQGDDEE 204          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: W7TGN1_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGN1_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.560e-53
Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = 0
Query:  106 MAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVID-MHQADKKRMGGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 274
            M K+G+ +G GLG  +QGI++ +++ + GGG GVI    Q  K                 KRGLFSNPT+++LLKNMVGPGEVDD+L+GET+ EC + GPV  CL+FE+     P+ +RVR FVAFE+QESAVKAY+ MNGRFFGGRQ+ ASF+ E+KF   DL P  +E
Sbjct:    1 MKKLGYQEGAGLGRDRQGITEAIKARALGGGKGVISGPAQGGKGAQDVDRQQXXXXXXXXKRGLFSNPTKIVLLKNMVGPGEVDDDLQGETAEECAKHGPVSECLVFEVNDNSYPEEERVRTFVAFERQESAVKAYVAMNGRFFGGRQVQASFFDEEKFARKDLAPGKEE 170          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A835ZCV1_9STRA (Putative DNA-damage repair protein drt111 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCV1_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.880e-52
Identity = 99/174 (56.90%), Postives = 121/174 (69.54%), Query Frame = 0
Query:   98 GMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARK-KRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEP 270
            GM  A+ +MAKMG  +G+GLG S QGISQP+ + S G GMG + MH AD+KR    +           KRGLFSNPT VLLLKNMVG GEVD +LEGE   EC ++GPVR+CL+ E  G   P  + V  FVAFE+QESA+KAYL+MNGRFFGGRQI A+FY+E KF+  +  P
Sbjct:  242 GMALAQSLMAKMGWQEGKGLGKSGQGISQPIVAQSTGVGMGTVAMHPADRKRPAQAAXXXXXXXXXSAKRGLFSNPTCVLLLKNMVGAGEVDSDLEGEVKEECMKYGPVRQCLVREHAG--LPADETVWTFVAFERQESAIKAYLDMNGRFFGGRQIGAAFYEEAKFERGEYGP 413          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A7S2W0J2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0J2_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.350e-44
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 0
Query:  152 GPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEE 275
            GP   P   P +KKR LF NP+ VLLLKNMVGPGEVD++L+ E + EC +FGPVR+C+++E K    P+ + VR FVAFEKQESA+KA+L+M GRFF GRQI  +F+KED+F + D  P P+EE
Sbjct:   60 GPGMVPPQGPPKKKRALFRNPSSVLLLKNMVGPGEVDEDLQNEVAEECSKFGPVRQCVVYEHKAPGVPEHEAVRTFVAFEKQESAIKAFLDMEGRFFAGRQIHCAFFKEDRFKSGDFAPSPEEE 183          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A077W9K9_9FUNG (G-patch domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077W9K9_9FUNG)

HSP 1 Score: 161 bits (408), Expect = 3.670e-43
Identity = 86/173 (49.71%), Postives = 116/173 (67.05%), Query Frame = 0
Query:  102 AERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 274
            A ++MAK G  +GQGLG  + G+ + LQ  + G G GVI     +K ++   S +P+PPPA +     S P+ V+LL NMVGPGEVDD L+ ET+ EC ++G V RCLIFE+ GG+ P+ Q VRIFV F + ESAV A  ++NGRFFGGR + A F+  ++FD LDL P P+E
Sbjct:  271 ARKVMAKYGWQEGQGLGRDEDGLREALQVQATGRGSGVI----VNKSQIS--SVSPSPPPASRT----STPSPVVLLTNMVGPGEVDDMLQEETADECGKYGQVERCLIFEVPGGQVPEDQAVRIFVKFTRVESAVAALNDLNGRFFGGRVVTARFFDNNRFDRLDLAPGPNE 433          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A5J4XMS3_9CHLO (Splicing factor 45 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XMS3_9CHLO)

HSP 1 Score: 159 bits (403), Expect = 9.370e-43
Identity = 85/179 (47.49%), Postives = 111/179 (62.01%), Query Frame = 0
Query:   98 GMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARKKRG--LFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 274
            GM+ A +MM KMG   G GLG +KQGI  PL         G I    A + +        A PPA+K +G  +   PTRV+LL+NMVGPGEVD +LE E + EC ++G V+  +IFE+     PD Q VRIFV FE+ E A K+ +++ GRFFGGR ++A+F+ EDKFD  DL PQP E
Sbjct:  222 GMDLAAKMMEKMGWKSGLGLGRNKQGIVNPLMVQKTDKRGGTIVSSPAAQAQA-----AEAAPPAKKPKGGVILGTPTRVVLLRNMVGPGEVDPDLEDEVANECSKYGQVQSVMIFEVTTAGYPDDQAVRIFVEFERMEQATKSVIDLGGRFFGGRTVSATFFDEDKFDKQDLGPQPGE 395          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: UPI000BA7F307 (splicing factor 45-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7F307)

HSP 1 Score: 157 bits (396), Expect = 4.280e-42
Identity = 78/169 (46.15%), Postives = 112/169 (66.27%), Query Frame = 0
Query:  102 AERMMAKMGHTQGQGLGASKQGISQPL--QSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDL 268
            A R+MAK G+ +GQGLG  +QG+SQ L  +  S  GG  + +     + ++  PS   +         +  NP++V+LL+NMVGPGEVD++LE ET  EC ++G V RCLIFEI GG  PD + VRIF+ F++ ESA+KA +++NGR+FGGR + ASFY +D+F   +L
Sbjct:  188 AARIMAKYGYKEGQGLGKKEQGMSQALLVEKTSKRGGKIIHEKDLPKEPQVSSPSTGSSSSAPESITEMMKNPSKVVLLRNMVGPGEVDEDLEPETKEECGKYGDVIRCLIFEIPGGNVPDEEAVRIFIEFKRMESAIKAVVDLNGRYFGGRVVKASFYDQDRFKRFEL 356          
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Match: A0A2G9GQP0_9LAMI (mRNA splicing factor n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GQP0_9LAMI)

HSP 1 Score: 156 bits (395), Expect = 1.020e-41
Identity = 86/176 (48.86%), Postives = 106/176 (60.23%), Query Frame = 0
Query:   99 MNFAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRMGGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 274
            M  A+RMMA+MG  QGQGLG  +QGI+ PL +       GVI       K++             K       PTRV+LL+NMVGPGEVDD+LEGE + EC +FG V R LIFEI     P  + VRIFV FE+ E A KA +E+ GRFFGGR + ASFY ED+F+  +L P P E
Sbjct:  215 MTAAQRMMARMGWKQGQGLGKQEQGITTPLMAKKTDKRGGVIVNASESSKKV-------------KSVNFNGTPTRVVLLRNMVGPGEVDDDLEGEVAEECAKFGTVTRVLIFEITEANFPHDEAVRIFVQFERAEQATKALIELEGRFFGGRVVHASFYDEDRFNNNELAPLPGE 377          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6155.14727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK36_9PHAE1.100e-12576.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL75_ECTSI2.020e-9966.93DNA-damage repair protein drt111, putative n=1 Tax... [more]
A0A6U3SBK6_9STRA2.880e-5555.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TGN1_9STRA2.560e-5352.94RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A835ZCV1_9STRA4.880e-5256.90Putative DNA-damage repair protein drt111 n=1 Tax=... [more]
A0A7S2W0J2_9STRA4.350e-4458.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A077W9K9_9FUNG3.670e-4349.71G-patch domain-containing protein n=1 Tax=Lichthei... [more]
A0A5J4XMS3_9CHLO9.370e-4347.49Splicing factor 45 n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
UPI000BA7F3074.280e-4246.15splicing factor 45-like n=1 Tax=Limulus polyphemus... [more]
A0A2G9GQP0_9LAMI1.020e-4148.86mRNA splicing factor n=1 Tax=Handroanthus impetigi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 96..140
e-value: 0.0012
score: 28.1
IPR000467G-patch domainPFAMPF01585G-patchcoord: 99..131
e-value: 3.7E-8
score: 33.1
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 98..155
score: 11.057
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 175..256
e-value: 6.9E-17
score: 72.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 201..253
e-value: 3.3E-5
score: 23.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 174..260
score: 9.831
IPR040052Splicing factor 45PIRSFPIRSF031066SPF45coord: 56..275
e-value: 1.4E-62
score: 210.3
IPR040052Splicing factor 45PANTHERPTHR13288SPLICING FACTOR 45 SPF45coord: 54..270
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 173..259
e-value: 4.5E-25
score: 89.5
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 183..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6155contigL-elsbetiae_contig6155:5771..11112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6155.14727.1mRNA_L-elsbetiae_contig6155.14727.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6155 4890..11289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6155.14727.1 ID=prot_L-elsbetiae_contig6155.14727.1|Name=mRNA_L-elsbetiae_contig6155.14727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
MAALEATMGRGRGRGLSNLPAWMTKGKGAAPGSPENIPEPPTPGRGPSPA
APGQFDSVPEGGRRQGRFGPQEKVGGAGAGAGGGAGGGAGVGAGAESGMN
FAERMMAKMGHTQGQGLGASKQGISQPLQSMSAGGGMGVIDMHQADKKRM
GGPSDTPAPPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECE
RFGPVRRCLIFEIKGGETPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGG
RQIAASFYKEDKFDALDLEPQPDEEK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR003954RRM_dom_euk
IPR000504RRM_dom
IPR040052RBM17
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf